Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g2412 ATGGAACCTGCTCAACTGATATCTGAAGAATGGAGTTCTCTTAGTGGACTGCATACAGCTGAGGAAGCAGACTTTATGGCTCAGTTGCTTGATCACAATGCAAATACCAATTTCAACTCATACTTTCCTTCAAATGTTACAAATACTAATCTTCTATGCTTCTCCCAAAGGAGTATCTCCAACACTGATAGTGGTAAAAGCATATTTTCCACTACAAGTAGTGGAACCTACTCCTGTGATCCAGCAACAAACTTTGACTCTTTGTCCATGGTTTTTTGCTTGGAAGATGCCAACTTGAGCCAACTGATAAATGAAAGCACTGATGAAGAGTGGAATAATGAAATGATGGTTTCTGAACCTGTAGAAGAGGATAGAAAGAACCCAGCAAAAAGATTTAGGAGCTCAATAGAGGTCTCAAGCACATTGAAGAATGTTAAATTGATGAAAAATCCAATGTCTACTTCTATTAGCAATGATGAAGATGCTAGCAGCTTGAGCCTCCAAAGGCATGGCTCCAGCATAAAGGATGACTCTAATGTTTCTCTGGAGCCCAGTGGAAGGGTATCAAAAGACCTTGCAGCTCCCAATTTATATAGAAAATCAAGAGCAACCAGCAGTGCTGCCACTGATGCACAGAGCCTTTATGCAAGAAAGAGAAGAGAAAGAATAAATAAGAGATTGAGAATATTGCAAAAGCTTGTCCCTAATGGAACCAAGGTTGATATAAGCACCATGCTTGAGGAAGCTTTCCAATACGTGAAGTTTTTACAGCTACAAATTAAGCTTCTGAGCTCTGACGATCTGTGGATGTATGCTCCAATTGCTTACAATGGAATAAACATTGGATTAGACCTCAGTATTTCCCCAACCAAAGGAAGATGA 882 0.3968 MEPAQLISEEWSSLSGLHTAEEADFMAQLLDHNANTNFNSYFPSNVTNTNLLCFSQRSISNTDSGKSIFSTTSSGTYSCDPATNFDSLSMVFCLEDANLSQLINESTDEEWNNEMMVSEPVEEDRKNPAKRFRSSIEVSSTLKNVKLMKNPMSTSISNDEDASSLSLQRHGSSIKDDSNVSLEPSGRVSKDLAAPNLYRKSRATSSAATDAQSLYARKRRERINKRLRILQKLVPNGTKVDISTMLEEAFQYVKFLQLQIKLLSSDDLWMYAPIAYNGINIGLDLSISPTKGR* 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g2412 293 MobiDBLite consensus disorder prediction 152 185 - -
Apr8g2412 293 SMART finulus 213 262 IPR011598 GO:0046983
Apr8g2412 293 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 112 290 - -
Apr8g2412 293 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 207 256 IPR011598 GO:0046983
Apr8g2412 293 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 207 272 IPR036638 GO:0046983
Apr8g2412 293 Pfam Helix-loop-helix DNA-binding domain 217 257 IPR011598 GO:0046983
Apr8g2412 293 Gene3D - 208 270 IPR036638 GO:0046983
Apr8g2412 293 CDD bHLH_AtIND_like 208 270 - -
Apr8g2412 293 MobiDBLite consensus disorder prediction 152 186 - -
Apr8g2412 293 PANTHER TRANSCRIPTION FACTOR BHLH84-LIKE 112 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g2412 Apr-Chr8 34333263 34334691 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g2412 10 283 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G33880 37.607 1.17e-51 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Apr8g2412 HLH 7.5e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g2412 - - aprc:113871866 567.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g2412 8 34333263 34334691 Apr8g2412 8 34333263 34334691 ECH