Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g2400 ATGTCTCTCTCGCCAGACCCTTCCGCCGCCGCTAACTTCTGCGGCAGCTTAATCTCCGACCACCCGTCGCCGCTCCCGCCTGAGTCCGACGAGGCAGTGATCGCCGAGCTTATCGACGCGGAGAGTCACCACATGCCGGGAAATGATTATCTCCGGCGGTGCCGCGACCGTTTTATCGACATCACGGCACGCTTGGATGCCATCAACTGGATCTTGAAGGTCCACGCATTCTACAGGTTTAGTCCAGTAACGGCGTTTCTCTCCGTCAACTACTTGGACCGTTTCTTGTCGTGCTCTTCTCTTCCGCGACCGAATGGGTGGCCGTTTCAGCTGTTATCAGTGGCTTGTTTGTCTCTAGCGGCGAAAATGGAAGAGCCCAATGTGCCGCTCTTGCTTGACCTGCAATTGTTTGAGCCCAGGTTCGTGTTTGAGCCCAGAACGGTTCAGAGAATGGAGCTCTGGGTCATGGCCAATCTCAAATGGAGACTCCGTTCCGTTACTCCCTTCGATTACCTTCATTATTTCATAGCCAAGCTTCCTTCTTCTTCTTCCTTGTCTTCCGAATCGGTGAATCGGTTCTTCTCTTCAGCCTCCGACCTCATCCTCAGCACCACCCGCGTGATCGATTTCTTGCGGTTTGCGCCGTCCACCGTGGCAGCCGCCGCCGTGCTCTGCTCGGCTGGCCGTGACATTGTTTCCGCGAACGGCCAATTGCTGCTGTGTTCTCACGACAGAGTAAACAAAGAAATGGTGAGATGCTGTCACCAACTAATGGAGGAGTACGTGGTGGACACGTGTCCCGCATCTCGCAATAAAGAGACGAGAGCCGAGCCGCCGCCCCCCTCCAGCCCCGTCGGCGTCCTGGACGCCGCTACCTGTGTGAGCTGCGACACACGTTCCGAGAGGAATTACCTTGGCTCAAGCGGCGAACAAGCCGAGCCGCCAAACAAACAGCTGCGATCCTCTGCTCCCGATGGACCGCAGCAATAG 990 0.5646 MSLSPDPSAAANFCGSLISDHPSPLPPESDEAVIAELIDAESHHMPGNDYLRRCRDRFIDITARLDAINWILKVHAFYRFSPVTAFLSVNYLDRFLSCSSLPRPNGWPFQLLSVACLSLAAKMEEPNVPLLLDLQLFEPRFVFEPRTVQRMELWVMANLKWRLRSVTPFDYLHYFIAKLPSSSSLSSESVNRFFSSASDLILSTTRVIDFLRFAPSTVAAAAVLCSAGRDIVSANGQLLLCSHDRVNKEMVRCCHQLMEEYVVDTCPASRNKETRAEPPPPSSPVGVLDAATCVSCDTRSERNYLGSSGEQAEPPNKQLRSSAPDGPQQ* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g2400 329 SUPERFAMILY Cyclin-like 26 163 IPR036915 -
Apr8g2400 329 MobiDBLite consensus disorder prediction 301 329 - -
Apr8g2400 329 Pfam Cyclin, C-terminal domain 166 267 IPR004367 -
Apr8g2400 329 Gene3D - 36 256 - -
Apr8g2400 329 ProSitePatterns Cyclins signature. 64 95 IPR006671 -
Apr8g2400 329 PANTHER CYCLIN-D2-1-LIKE 24 319 - -
Apr8g2400 329 PANTHER CYCLINS 24 319 IPR039361 -
Apr8g2400 329 CDD CYCLIN 64 153 IPR013763 -
Apr8g2400 329 Gene3D - 47 164 - -
Apr8g2400 329 Pfam Cyclin, N-terminal domain 34 163 IPR006671 -
Apr8g2400 329 SMART cyclin_7 69 157 IPR013763 -
Apr8g2400 329 SMART Cyclin_C_2 166 296 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g2400 Apr-Chr8 34261194 34262715 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g2400 34 264 Core Cell Cycle Gene Families AT1G70210 45.148 1.33e-64 206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g2400 K18810 - gmx:100776178 444.506
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g2400 8 34261194 34262715 Apr8g2400 8 34261194 34262715 ECH