Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g2397 ATGGTGCTTCAGAAGAAGGAGAGAACGTGGGTGATGATGAACTTAGAGGGGCAGAGAAAGGTGGTGGAGGCTCCCAAACACGTGATAATGCAGCGTACGGGTGTGTCTGGTCGGGACCTGCGAATACTTGACCCTTTGCTTTCATACCCTTCCACCATTGCTGGGCGTGGAAGAGCTATCATCGTCAACTTGGAACACATAAAGGCCATCATCACTGCTCAAGACCTTCTCTTCGTCAATTCCACCGACCCTTCTGCTTTCTCTTTTCTTGATGACCTTCACTCGCAGATTCTGTGCCACCACCGTGCCACCACTCAACCACAACCTCCGGAGGCTCAAGATGGGAAGAATGAATCTGAAACAAAGCAAGATGGCATGAAGATTCTTCCATTTGAGTGTTTAGCACTGGAGGCATGCCTTGAGGCTGCTTGTGGTGCTTTAGAAAATGAGGCAAAGATATTGGAGCAGGAGACTTATCCTGCCTTAGATAAATTGACCTCACAGATTAGTACTTCCAATTTGGAATGCATTCGTCTTGTTAAGAGCCGCTTAGTTGCCTTGGCTGCTCGTGTTCGAAGGGTAAGGGATGAATTAGAGCACTTGCTGGATGATAATGAACATTTGGCTGAGCTGTATCTGACAGACAAGTTGGTTCAACAGCAACTTGAAAATTCTACTGCCTCATTCATGAATGACATGGAGAATGAAGTTCTTCAACCAGATATAAGTGACAGGATTCCTCCTGAAGTATCATTGGAACGTGGTGTAGATTCTGCTAGTGATCATGAAGATCATGAAAATTCTGCTGACTACTCAAAAGACCAAATGTTTGGAGCATCTAATGGAGTTGGTAGTGAAATGCATGAAGCCCAGGCTAGCACTACCTACGGTGCTGTAACCAGACACTCTTTTGATGTGGAGGAACTTGAGATGCTCTTGGGAGCTTACTTTGTGCAAATCGGTGGCACATCGAACAAGCTATCAAGGCTGAGGGAGTACGTGGATGACACAGAGGACTACATAAACATTACCTTGGATGACAAACAGAACCGTCTCCTCCAAATGGGAGTGAAGTTGGGCACAGCAAATATACTTTTGAATGCCTTCATATGTGTGACTGGTCTATTTAGCATGAATATTCATATCGATCTATATGATACTGGGATGCCACAGTTCCTCGGGACTATTTTTGGATGCACTGTTGCTTGCATATTCTTGTATGTGGTTGCCATCATTTGGTACAAGTGCAAGCGCTTGCTGGAATAG 1266 0.4518 MVLQKKERTWVMMNLEGQRKVVEAPKHVIMQRTGVSGRDLRILDPLLSYPSTIAGRGRAIIVNLEHIKAIITAQDLLFVNSTDPSAFSFLDDLHSQILCHHRATTQPQPPEAQDGKNESETKQDGMKILPFECLALEACLEAACGALENEAKILEQETYPALDKLTSQISTSNLECIRLVKSRLVALAARVRRVRDELEHLLDDNEHLAELYLTDKLVQQQLENSTASFMNDMENEVLQPDISDRIPPEVSLERGVDSASDHEDHENSADYSKDQMFGASNGVGSEMHEAQASTTYGAVTRHSFDVEELEMLLGAYFVQIGGTSNKLSRLREYVDDTEDYINITLDDKQNRLLQMGVKLGTANILLNAFICVTGLFSMNIHIDLYDTGMPQFLGTIFGCTVACIFLYVVAIIWYKCKRLLE* 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g2397 421 Gene3D - 2 82 - -
Apr8g2397 421 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 7 421 IPR039204 -
Apr8g2397 421 PANTHER MAGNESIUM TRANSPORTER MRS2-3 7 421 - -
Apr8g2397 421 Coils Coil 184 211 - -
Apr8g2397 421 MobiDBLite consensus disorder prediction 245 274 - -
Apr8g2397 421 MobiDBLite consensus disorder prediction 247 271 - -
Apr8g2397 421 CDD Mrs2_Mfm1p-like 10 419 IPR039204 -
Apr8g2397 421 Gene3D Magnesium transport protein CorA, transmembrane region 85 352 - -
Apr8g2397 421 Coils Coil 137 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g2397 Apr-Chr8 34242160 34245229 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g2397 9 421 MRS2 Gene Family AT3G19640 51.111 2.03e-142 413
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g2397 - - aprc:113872466 786.178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g2397 8 34242160 34245229 Apr8g2397 8 34242160 34245229 ECH