Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g2381 ATGATTACAGAGAGGGAAATCACGATGACAGGTGTTTCTTACAGGTTTAATACCTTTGTGTGTTGCCTCCTTGTGATAATTTCATCTCTAACCAACGCCCAGCCAAACTTTTTATATAAATTCTGTATTGATCAACAAGGCAACTACACAGCAAACAGCACCTATCAGCACAACCTTAATACCCTTTTGTCCAATCTCTCTTCCAACACAGAAATTAAATACGGTTTCTACAATTTCTCGTATGGCCAAAACAGTGACAAGGTAAATGCCATAGGGCTATGCAGAGGAGACGTTAAACAAAATGAATGTCTCAGCTGCCTCAACAATTCAAGAGTGCTTCTCCCACGGCTTTGTCCAAACCAGAAAGAGGCAATTGGGTGGTACGACAATTGCATGTTGCGCTACTCCGACCGCTCAATATTTGGTCTCATGGAGGCTTCACCCTCGTTTTATATGTGGAACTTAAACAATGCAACAGATGTGGATCGGTTCAATGAAGTGTTGAGAAAGTTGTTGGAGAGCCTAAGAGACAAAGCTGCACCAGGTGATTCACGTAAGTTTGGTGTAGCAAACTTAGTCGGTCCAAGTTTTCAAACCATATATGGTCTTGTACAGTGTACACCTGATTTGTCTCAACAGGACTGCTACAACTGCTTGACTGGAGCTATCTCAGAAATCCCAAATTGTTGTAATAACAAAATAGGTGGTAGGGTTATTAGACCCAGTTGTAATTTCAGATATGAAAATTACCGCTTCTATGAACCTTCTGCAGAAGCATCACCACCGTCACCGCAGCCAATGCCTTCACCACCTTCACTCTCCTCCAATAATAACACTTCCTCTCAAGGTAAGCATCACATTTCACGAACTGCCATCGCCATAGCTGTGCCAATTGCTGTTGTTTTGGTGCTCAGTACTTTTATCTGCATCTATTTAAGGGTGAGGAAGCCACGGGAAGTTTTTGCAAATGAAAATGAAGATGAAGATGAAATTAAAACCAGGGAGTCATTGCAATTCCATTTTGATACCATAAGAGTCGCTACAGATGACTTCTCAGATTCTAATAAACTTGGACAAGGTGGATTTGGAGCTGTATACAGGGGTAGGCTATCAAATGGACAAGAGATTGCAGTTAAAAGGTTGTCGAGGGAATCTGGTCAAGGGGACGTGGAATTTAAGAATGAAGTGCTTTTAGTGGCCAAGCTCCAACACCGAAATTTAGTTAGGCTACTTGGTTTCTCTTTGGAAGGAAGTGAAAAGCTACTCGTCTATGAATTTGTTCCTAACAAAAGCCTTGATTACTTTATATTTGATCCAATCAAGAAAGTACAATTGGATTGGGAAATGCGCTACAAAATCATTGTAGGTATTGCTCGAGGCCTTGTATACCTTCACGAAGATTCCATACTGCGCATTATACATCGTGATCTTAAGCCAAGTAACATTCTCTTGGATGAAGAGATGAATCCAAAGATATCTGATTTTGGCATGGCAAGACTGTTTGTTGTGGATCAAACTCAAGGAAATACAAGTAAAATTGTTGGAACCTATGGATATATGGCACCTGAATATGCAATGCATGGACAATTTTCAGTAAAATCAGATGTCTTTAGTTTTGGTGTACTAGTTCTTGAGATTGTAAGTGGTCAAAAGAACACCGGCATTCGTCATGGGGAAAATATAGAGGATCTAATGAATTTCGCATGGAGAAACTGGAGGGGCGGGACAGCCACAAACATTATAGACCCATCACTAAACAACGGTTCACAAAATGAAATGATGAGATGCATCCACATTGGTTTACTATGTGTTCAAGAAAATGTAGCTGATAGACCAACCATGGCTACCATTGCTCTCATGCTTAATAGCCATTCTCTTTCTCTTCCAGTGCCTTCCGAACCTGCTTTTTTTATGGACAGGGATGAGTATAGTTCAAGGCCAAGTGAATCGCCAATAAAATCAGATAAAGAATCAGTGAATGAGGTTTCAATTACTGAGCTGTATCCTCGCTAG 2013 0.4064 MITEREITMTGVSYRFNTFVCCLLVIISSLTNAQPNFLYKFCIDQQGNYTANSTYQHNLNTLLSNLSSNTEIKYGFYNFSYGQNSDKVNAIGLCRGDVKQNECLSCLNNSRVLLPRLCPNQKEAIGWYDNCMLRYSDRSIFGLMEASPSFYMWNLNNATDVDRFNEVLRKLLESLRDKAAPGDSRKFGVANLVGPSFQTIYGLVQCTPDLSQQDCYNCLTGAISEIPNCCNNKIGGRVIRPSCNFRYENYRFYEPSAEASPPSPQPMPSPPSLSSNNNTSSQGKHHISRTAIAIAVPIAVVLVLSTFICIYLRVRKPREVFANENEDEDEIKTRESLQFHFDTIRVATDDFSDSNKLGQGGFGAVYRGRLSNGQEIAVKRLSRESGQGDVEFKNEVLLVAKLQHRNLVRLLGFSLEGSEKLLVYEFVPNKSLDYFIFDPIKKVQLDWEMRYKIIVGIARGLVYLHEDSILRIIHRDLKPSNILLDEEMNPKISDFGMARLFVVDQTQGNTSKIVGTYGYMAPEYAMHGQFSVKSDVFSFGVLVLEIVSGQKNTGIRHGENIEDLMNFAWRNWRGGTATNIIDPSLNNGSQNEMMRCIHIGLLCVQENVADRPTMATIALMLNSHSLSLPVPSEPAFFMDRDEYSSRPSESPIKSDKESVNEVSITELYPR* 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g2381 670 Gene3D Phosphorylase Kinase; domain 1 315 426 - -
Apr8g2381 670 Pfam Protein kinase domain 352 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g2381 670 MobiDBLite consensus disorder prediction 640 670 - -
Apr8g2381 670 MobiDBLite consensus disorder prediction 640 660 - -
Apr8g2381 670 ProSitePatterns Serine/Threonine protein kinases active-site signature. 472 484 IPR008271 GO:0004672|GO:0006468
Apr8g2381 670 ProSiteProfiles Gnk2-homologous domain profile. 37 140 IPR002902 -
Apr8g2381 670 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 13 657 - -
Apr8g2381 670 SMART serkin_6 351 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g2381 670 CDD STKc_IRAK 357 622 - -
Apr8g2381 670 Pfam Salt stress response/antifungal 157 250 IPR002902 -
Apr8g2381 670 Pfam Salt stress response/antifungal 42 137 IPR002902 -
Apr8g2381 670 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 13 657 - -
Apr8g2381 670 SUPERFAMILY Protein kinase-like (PK-like) 339 647 IPR011009 -
Apr8g2381 670 ProSiteProfiles Gnk2-homologous domain profile. 146 252 IPR002902 -
Apr8g2381 670 MobiDBLite consensus disorder prediction 256 284 - -
Apr8g2381 670 Gene3D Transferase(Phosphotransferase) domain 1 427 628 - -
Apr8g2381 670 ProSiteProfiles Protein kinase domain profile. 351 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g2381 670 ProSitePatterns Protein kinases ATP-binding region signature. 357 379 IPR017441 GO:0005524
Apr8g2381 670 Gene3D - 147 252 IPR038408 -
Apr8g2381 670 Gene3D - 34 139 IPR038408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g2381 Apr-Chr8 34124521 34128402 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g2381 19 670 Receptor kinase-like Gene Family AT4G21410 51.331 0.0 651
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Apr8g2381 Pkinase 7.8e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g2381 - - gmx:113000773 877.085