Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Apr8g2380 | ATGGGTGCTATTTCATTTCTTTGCTGTTTCTTTGCGATAATCATATCGCAAGGCAGCGCCCAGACTTGTGATAACGAGAAAGGAAACTACACAAGCGATAGCGCCTATCACGACAACCTCAAGGTCCTCCACACTCTTTTGTCCACCTTCACTTTCCTCCGAGATATTAACTATGGTTTCTACAATTTCTCGTACGGCGAACACACAGACAAAGTATACGTCATTGGCCTCTGTAGAGCTGATATTAACCCAGACACGTGCCTCAGTTGTCTCAGTAATTCGAGTGTGTCTCTCACACAGAACTGTCCAAACCAGAAAGAGGCAATCATGTGGACTGGAGAGTGCATGTTGCGCTACTCTCACCGCTCAATATTTGGGGTCCTGGAAAATGATCCAAAGACAATACTCTATTTTACAAAGAAAGTAACAGGATCGGTGGATGCATTCAATGAAGCGCTGGCGCAGTTGATGAGGAACCTAACAAAAGAAGCTGCATCAGGTGACTCTCGTCGTAAGTTTGCTTTAGGTACCTCGCCTGCTGGTTTTCAAACCATATACGGTAATGTGCAGTGTACGCCTGATTTGTCATCGGAAGAATGCAGTAACTGCTTGAGTGATGCTATCTCAGAAATCCCAGGTTGTTGTAGTGGTTATGCTGGAGTTAACGTTTTAAAACCCAGTTGTAGAATTAGATTTGACCCTTATAGCTACTTCGGTCCTTTGCCAAAATTAGACCCAGATGTACCACCATCGCCCCAACCTCAACTCTCCACCCGCAACCCTTCTACACAAGGAAAGAGTAACTCGCCACTGACAGCCATCGCCATAGCAGTGGCCGTTGTTGTTGTTGTATTGGTGCTCTGTTTTATCTTTATTTATTTGAAAGTGAGGAGGCCAAGGGATATTTTTGAAACTGAAGATGATGATGATGAAATTAAAACCCACGAGTCATTACAATTACAGTTTTATACAATACGAATTGCCACAAATGACTTCTCAGATTCTAATAAACTTGGACAAGGAGGATTTGGGGCTGTTTACAGGGGTAGATTCTCCAATGGACGAGAGATTGCTGTCAAAAGATTGTCAAGGGATTCTCGCCAAGGAGATATTGAATTTAAGAATGAGGTGCTTCTAGTGGCCAAGCTTCAACACCGAAATTTAGTCAGACTACTTGGTTTTTGTCTCGAAGGAAGAGAAAAGCTACTTGTTTACGAGTTTGTTCCTAATAAAAGCCTTGATTATTTCATATTTGATGAAACCATGAAAACAGAATTGGCATGGCAAAACCGCTACAAAATAATTGGAGGTATTGCTCGTGGCATTCTTTACCTTCATGAGGATTCTCGATTGCGCGTTATTCATCGTGATATTAAAGCTAGCAACATTCTCTTAGACCAAGAGATGAATCCTAAGATAGCTGATTTTGGCATGGCAAGATTGTTTGGTCTGAATCAAATACATGGAGATACAAATAGAATTGTTGGAACCTATGGATATATGGCACCTGAGTATGCAATGCATGGACAGTTTTCAGTGAAGTCAGATGTCTTCAGTTTTGGGGTATTGGTTCTTGAGATTTTAAGTGGCCTAAAAAATCACGGTATTCGTCATGGGGAGAATGCTGAGGACCTACTGAGCTTCGCATGGCGAAAATGGAGGGAGGGAACAGCTTTGAATATTGTAGATCCCGTATTAAATAACGCTTTGCAAAGTGAAATAATGAGATGCATCCACATTGGGTTACTGTGTGTACAAGAAAATGTAGCTGCCAGACCAAACATGGTTGCCGTTGTACGGATGCTTAGTAATGATACTGACACTCTCCCAGTACCTTCAGAACCAGCATTTTATGTGGATAATACTACTGGAAACCTTTCTGGCATGCATCAATGGGAGTATAATTCAACGGCAACAAGATCAACCCAACAGTTAAATAGATCATCTCAAGAATCAGTCAATAAAATTTCAATTACTGAGTTATATCCTCGCTAG | 1995 | 0.4155 | MGAISFLCCFFAIIISQGSAQTCDNEKGNYTSDSAYHDNLKVLHTLLSTFTFLRDINYGFYNFSYGEHTDKVYVIGLCRADINPDTCLSCLSNSSVSLTQNCPNQKEAIMWTGECMLRYSHRSIFGVLENDPKTILYFTKKVTGSVDAFNEALAQLMRNLTKEAASGDSRRKFALGTSPAGFQTIYGNVQCTPDLSSEECSNCLSDAISEIPGCCSGYAGVNVLKPSCRIRFDPYSYFGPLPKLDPDVPPSPQPQLSTRNPSTQGKSNSPLTAIAIAVAVVVVVLVLCFIFIYLKVRRPRDIFETEDDDDEIKTHESLQLQFYTIRIATNDFSDSNKLGQGGFGAVYRGRFSNGREIAVKRLSRDSRQGDIEFKNEVLLVAKLQHRNLVRLLGFCLEGREKLLVYEFVPNKSLDYFIFDETMKTELAWQNRYKIIGGIARGILYLHEDSRLRVIHRDIKASNILLDQEMNPKIADFGMARLFGLNQIHGDTNRIVGTYGYMAPEYAMHGQFSVKSDVFSFGVLVLEILSGLKNHGIRHGENAEDLLSFAWRKWREGTALNIVDPVLNNALQSEIMRCIHIGLLCVQENVAARPNMVAVVRMLSNDTDTLPVPSEPAFYVDNTTGNLSGMHQWEYNSTATRSTQQLNRSSQESVNKISITELYPR* | 665 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Apr8g2380 | 664 | Pfam | Salt stress response/antifungal | 146 | 233 | IPR002902 | - | |
Apr8g2380 | 664 | Pfam | Salt stress response/antifungal | 23 | 121 | IPR002902 | - | |
Apr8g2380 | 664 | MobiDBLite | consensus disorder prediction | 243 | 265 | - | - | |
Apr8g2380 | 664 | SUPERFAMILY | Protein kinase-like (PK-like) | 316 | 602 | IPR011009 | - | |
Apr8g2380 | 664 | ProSiteProfiles | Gnk2-homologous domain profile. | 18 | 124 | IPR002902 | - | |
Apr8g2380 | 664 | Gene3D | - | 18 | 123 | IPR038408 | - | |
Apr8g2380 | 664 | Gene3D | - | 134 | 237 | IPR038408 | - | |
Apr8g2380 | 664 | PANTHER | CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN | 4 | 647 | - | - | |
Apr8g2380 | 664 | SMART | serkin_6 | 332 | 566 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Apr8g2380 | 664 | ProSiteProfiles | Gnk2-homologous domain profile. | 130 | 237 | IPR002902 | - | |
Apr8g2380 | 664 | Pfam | Protein tyrosine and serine/threonine kinase | 335 | 539 | IPR001245 | GO:0004672|GO:0006468 | |
Apr8g2380 | 664 | ProSitePatterns | Protein kinases ATP-binding region signature. | 338 | 360 | IPR017441 | GO:0005524 | |
Apr8g2380 | 664 | Gene3D | Phosphorylase Kinase; domain 1 | 298 | 407 | - | - | |
Apr8g2380 | 664 | CDD | STKc_IRAK | 338 | 602 | - | - | |
Apr8g2380 | 664 | PANTHER | RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 | 4 | 647 | - | - | |
Apr8g2380 | 664 | Gene3D | Transferase(Phosphotransferase) domain 1 | 408 | 610 | - | - | |
Apr8g2380 | 664 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 453 | 465 | IPR008271 | GO:0004672|GO:0006468 | |
Apr8g2380 | 664 | ProSiteProfiles | Protein kinase domain profile. | 332 | 617 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Apr8g2380 | Apr-Chr8 | 34118929 | 34122339 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Apr8g2380 | 4 | 664 | Receptor kinase-like Gene Family | AT4G21410 | 46.020 | 0.0 | 598 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_DLSV | Apr8g2380 | PK_Tyr_Ser-Thr | 7.7e-44 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Apr8g2380 | - | - | gmx:113000777 | 860.907 |