Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g2379 ATGTTTATACATTATAAAGGGGAAAAAAAAAAAAGAATCTCCAATCCATTAATCGGAGGCAGTCATCAATTTCTTTGTTACGTTCCATTGCTTGCATTTAGGATGGCTGCTATGGCCATAGTATCTGCAAAAGTGCTCTTATTTATTTTTTTCTCTGTCATTCTCGTGTTTCAAGCCACGGCCCAGCCAAGCTTCGTAAAATGTTTTTGTAATAATAAAAATGGCAACTACACTTCTAACAGTACTTTCCATGCCAACCTCAATGCCCTTTTGTCCAACCTCTCTTCCAACACTGAAATTGACTATGGCTTCTACAATTTTTCCATTGGCCAAAACTCTAACAAAGTTAACGCTATTGGGATGTGTAGAGGAGATGTTAAGTCAGAAGCTTGCCGTAGCTGCCTCAATAATTCAAGAGTCCTTCTCACGCAATTGTGTCCAAACCAGAAGGAGGCAATTGGGTGGTATGATGAGTGCATGTTGCGCTACTCTAACCGCTCAATATTTGGGACTATGGAAATTGAACCTTCTTGGAATATATGGAACAATAGGAATGCACCAAATGCGAATGAGTTCAATCAAGTTGTTGCTGAATTGCTGAGTAGTTTAGGAAGTAAAGCTGCTGCTGGTGATTCCCACCGTAAGTTTGCTGCAGCAAACAAAACAGGTCCAAGCTTTCAAACTATATTTGCTCATGTGCAGTGTACACCTGATTTGTCAGGGTTAGATTGCGGTCAGTGCTTGTTTGGAGCAATATCGTATATCCCAAACTGCTGTGCTGGTAAGGTACGAGTCAGAATGTTCAAACCAAGTTGTAATCTTAGATTTGACACCACCCCATACTATGATGATTCTATGATTGATGTGCCGCAATCCCTCGCACCGCAAGCTTTTCCTTCTACTCCTCCATCCGTCAATGCCACGTTCAGAAAAGGAAAGAGCGACTCATGGAAAATTGTCACTGCCATTATTGTGCCAATTGTCTCCTTTGTAATACTCCTTACCTTTGTTTGCATCCATTTAAAAGGAAAGAAACCACGGAAGTATTTGGAAAGTGAATCCGAAGTTGTCTATGAAATCGAGCCCACTGAGACATTACAATTTGATTTCCAAACCATCGTAGATGCTACAAATAACTTTTCAAATGCAAATAAGGTTGGGCAAGGTGGATTTGGATTAGTCTACAAGGGTAGTCTTCTCAATGGCAAAGAAGTTGCTATCAAACGGTTATCCAGGAACTCTGGCCAAGGAGATATAGAATTTAAAAATGAATTGTTATTATTAGCAAAACTTCAGCACCGAAATTTAGTGAGGCTACTTGGCTTTTGTCTGGAAACAGGAGAAATGATATTAGTCTACGAATTTGTTCCCAATAAAAGCCTTGATTACTTCATATTTGATCCCATCAAGCGTTTACTTTTGGATTGGGAAAGGCGCTACAAGATTGTAGAAGGTATTGCTCGAGGTCTTCTTTATCTTCATGAAGATTCTCGACTACGCATTATTCACCGTGATCTCAAAGCAAGCAATATACTCTTAGATGAAGAAATGAATCCAAAGATATCAGATTTTGGCATGGCCAGACTATTTGATGCAGATCAAACTGCAGCAAATACACTGAGAGTTGTTGGAACCCATGGATATATGCCACCGGAATATGCATTGCATGGACATTTTTCAGTGAAATCAGACGTTTTTAGTTTTGGGGTACTTGTTCTTGAGATTGTTACTGGACACAGAAACAATGATATCCATAATGGTGATTATGTAGAACATCTAATAAGCTTTGCATGGAGAAACTGGAGGGAAGGGACTGCCTCAGACATTGTAGATCCAACACTGAACAATTATTCAAGAAATGAGATAATCAAATGCATCCATATTGGATTACTGTGTGTTCAAGAAAATGTAGCCAACAGACCAAATATGGCAACAATTGTAGTCATGCTTAACAGCTACTCTATGAGTCTTCCAGTACCCTCACAACCTGCATATTTTATGAGTGGCAGTAGTTCATCAGTTTCAAGGTCAGGTGAATCAAGAAATAACTCCATGCAAGCATCAGAAAATGAGGCTTCTATTAGTGAGCAAGATCCTCGCTAG 2103 0.3947 MFIHYKGEKKKRISNPLIGGSHQFLCYVPLLAFRMAAMAIVSAKVLLFIFFSVILVFQATAQPSFVKCFCNNKNGNYTSNSTFHANLNALLSNLSSNTEIDYGFYNFSIGQNSNKVNAIGMCRGDVKSEACRSCLNNSRVLLTQLCPNQKEAIGWYDECMLRYSNRSIFGTMEIEPSWNIWNNRNAPNANEFNQVVAELLSSLGSKAAAGDSHRKFAAANKTGPSFQTIFAHVQCTPDLSGLDCGQCLFGAISYIPNCCAGKVRVRMFKPSCNLRFDTTPYYDDSMIDVPQSLAPQAFPSTPPSVNATFRKGKSDSWKIVTAIIVPIVSFVILLTFVCIHLKGKKPRKYLESESEVVYEIEPTETLQFDFQTIVDATNNFSNANKVGQGGFGLVYKGSLLNGKEVAIKRLSRNSGQGDIEFKNELLLLAKLQHRNLVRLLGFCLETGEMILVYEFVPNKSLDYFIFDPIKRLLLDWERRYKIVEGIARGLLYLHEDSRLRIIHRDLKASNILLDEEMNPKISDFGMARLFDADQTAANTLRVVGTHGYMPPEYALHGHFSVKSDVFSFGVLVLEIVTGHRNNDIHNGDYVEHLISFAWRNWREGTASDIVDPTLNNYSRNEIIKCIHIGLLCVQENVANRPNMATIVVMLNSYSMSLPVPSQPAYFMSGSSSSVSRSGESRNNSMQASENEASISEQDPR* 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g2379 700 SUPERFAMILY Protein kinase-like (PK-like) 364 677 IPR011009 -
Apr8g2379 700 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 44 691 - -
Apr8g2379 700 ProSiteProfiles Protein kinase domain profile. 380 654 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g2379 700 ProSiteProfiles Gnk2-homologous domain profile. 174 281 IPR002902 -
Apr8g2379 700 CDD STKc_IRAK 386 651 - -
Apr8g2379 700 Pfam Salt stress response/antifungal 185 278 IPR002902 -
Apr8g2379 700 Pfam Salt stress response/antifungal 70 165 IPR002902 -
Apr8g2379 700 Gene3D - 62 167 IPR038408 -
Apr8g2379 700 Gene3D - 176 281 IPR038408 -
Apr8g2379 700 Pfam Protein kinase domain 381 588 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g2379 700 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 44 691 - -
Apr8g2379 700 Gene3D Transferase(Phosphotransferase) domain 1 456 658 - -
Apr8g2379 700 MobiDBLite consensus disorder prediction 668 700 - -
Apr8g2379 700 Gene3D Phosphorylase Kinase; domain 1 342 455 - -
Apr8g2379 700 SMART serkin_6 380 654 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g2379 700 MobiDBLite consensus disorder prediction 668 694 - -
Apr8g2379 700 ProSitePatterns Serine/Threonine protein kinases active-site signature. 501 513 IPR008271 GO:0004672|GO:0006468
Apr8g2379 700 ProSitePatterns Protein kinases ATP-binding region signature. 386 408 IPR017441 GO:0005524
Apr8g2379 700 ProSiteProfiles Gnk2-homologous domain profile. 65 168 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g2379 Apr-Chr8 34114956 34118118 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g2379 45 700 Receptor kinase-like Gene Family AT4G21410 49.483 0.0 615
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Apr8g2379 Pkinase 5.5e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g2379 - - gsj:114402114 1007.67