Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g2376 ATGCATATCATCAACTTCTCTGTAACCCCATTAGCACTTTTCTCTGCGTTTCTTTTGCTCATCCACGCAAGGGAATCAGATCCCCCTTACCCTGTCTATCACTGCCAAAACCAAACATTTTACCAACCCAACACCACATTTCAGTCCAACTTAAATACCCTCTTCTCTTCTCTCATCTCCAACTCTTCTCTTCAATCCAACAACGGTTTCTACACAACCACTGTGGGTCAAAACACCACTGACGTCGTCAACGGTCTTTTCCTCTGCCGTGGCGACGTCAACGCCACCCTCTGCCTCGGCTGCGTCGCCACCGCAGCAAACGACATAACACGCCTCTGTCCGAACGACAGAGAGTCCATAATCTGGTCCGATTTTTGCATGTTGCATTACTCCAAAAGCACCCTCAAGAACAACTTGGTTACTGGACTTTCCGCGCACGACCACACACGTGTGATAAACTCGAACATTGACAAGTTCAATCAGTTATTCGCTGAGTTACTTTACAGTTTGGTGGAGAAAGCTGCAGCCGGGGTGGAGATAAAGTTTGCTGCAGGCGAAAAGGGTTTCACGAGTACACAGACACTGTACGGTATGGCACAGTGCGTGCCCGAGTTAACGAGAGAAGGATGTACCGCGTGCTTACAAAGCGCTATTAGAAGTCTTACCATGTACAGTGTACGAGCAGAGTTTATGTTTCCGGCATGTCATATCAGATATCAATTGTATCCATTTTTGTATAATACCACTTCAGAGATGCCACGTGTTCCTTCCCCATCTTCGGGAAGCAAACGTATATCAACGATTTTAGCAATTCTTGTCCCAATTGCCATTTTGGTGGCGCTATTGGTTCTTGGCTGCTGTTGGTGGCGAAGAAGGCGAAGCAAAAACCATGATGCGGTCCTGAATGCTACGAGTTATTTTATGGGTGAAGATGAGTCTTTGCGTTTTGACTTGGCTACAATAGAAGCTGTCACAAATGGATTCTCAGACGAAAATAAAATAGGCGAGGGTGGATTTGGTGAGGTTTATAAGGGTACCCTTCCGAATGGACAAGAGATAGCTGTGAAGAGGCTATCAAGAAGTTCCCGGCAGGGTGACTTGGAATTCAAGAACGAGGCTTCACTTGTTGCACAGCTTCAACATAGAAATTTAGTTAGGCTGTTAGGATTTTGCTTGGAGAGAAAGGAGAGGATACTTGTTTATGAATTCATACCAAATTCCAGCCTTGACAACTTTCTTTTTGATCGTGAGAACGAAGAAGAGCTAGACTGGGCAAGACGTTACAAAGTTATAGTTGGAATAGCTCGAGGAATGAAGTATCTCCATGAAGATTCTAGGCTAAGAATAATACATCGCGATCTCAAGGCTAGTAATGTTCTATTGGATGCGAACATGAATCCAAAGATTTCAGATTTTGGCTTGGCAAAGATTTCCCCTAATGATCAAAGTCAAGTAAATGCAGCAACAAGAAGGATAGTTGGAACATATGGTTACATGTCTCCAGAATATGCAATGCATGGAAAATATTCTGTGAAATCCGATGTGTTCAGCTTTGGAGTCTTGGTTTTGGAGATCATTCATGGCAAGAAGAACTCAAGTTATTATCGATCACATGAAGATGACGACATTTTGAGCATTACTTGGAAGAATTGGACAAATCAAACACCGTTCTTGATTTTGGATCCAAAATTGAATGGCTCGTATTCTCGAAATGAAGTTCGGAGATGCATCCACATCGCTTTATTATGCACTCAAGAAAACCCAGTTGATAGACCTTCAATGGCGACAATAGAAGTTGCGTTGAACAATTATTCTGTAACTTTAGCGTTACCTCGACAACCAGCATCTTATCTGCGATGGAGAACAACACCAGACAGATTAAGACACCAACGTGGTTCTGATGGGAACAGGTCCCCAATCCCTTCGTGTCCGAATGATTCTCTGATTACTGAGGTATATCCCCGCTAA 1968 0.4355 MHIINFSVTPLALFSAFLLLIHARESDPPYPVYHCQNQTFYQPNTTFQSNLNTLFSSLISNSSLQSNNGFYTTTVGQNTTDVVNGLFLCRGDVNATLCLGCVATAANDITRLCPNDRESIIWSDFCMLHYSKSTLKNNLVTGLSAHDHTRVINSNIDKFNQLFAELLYSLVEKAAAGVEIKFAAGEKGFTSTQTLYGMAQCVPELTREGCTACLQSAIRSLTMYSVRAEFMFPACHIRYQLYPFLYNTTSEMPRVPSPSSGSKRISTILAILVPIAILVALLVLGCCWWRRRRSKNHDAVLNATSYFMGEDESLRFDLATIEAVTNGFSDENKIGEGGFGEVYKGTLPNGQEIAVKRLSRSSRQGDLEFKNEASLVAQLQHRNLVRLLGFCLERKERILVYEFIPNSSLDNFLFDRENEEELDWARRYKVIVGIARGMKYLHEDSRLRIIHRDLKASNVLLDANMNPKISDFGLAKISPNDQSQVNAATRRIVGTYGYMSPEYAMHGKYSVKSDVFSFGVLVLEIIHGKKNSSYYRSHEDDDILSITWKNWTNQTPFLILDPKLNGSYSRNEVRRCIHIALLCTQENPVDRPSMATIEVALNNYSVTLALPRQPASYLRWRTTPDRLRHQRGSDGNRSPIPSCPNDSLITEVYPR* 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g2376 655 Gene3D Transferase(Phosphotransferase) domain 1 404 609 - -
Apr8g2376 655 ProSiteProfiles Protein kinase domain profile. 328 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g2376 655 ProSitePatterns Protein kinases ATP-binding region signature. 334 356 IPR017441 GO:0005524
Apr8g2376 655 Gene3D Phosphorylase Kinase; domain 1 289 403 - -
Apr8g2376 655 ProSiteProfiles Gnk2-homologous domain profile. 29 135 IPR002902 -
Apr8g2376 655 SUPERFAMILY Protein kinase-like (PK-like) 313 623 IPR011009 -
Apr8g2376 655 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 28 654 - -
Apr8g2376 655 CDD STKc_IRAK 334 597 - -
Apr8g2376 655 Gene3D - 144 244 IPR038408 -
Apr8g2376 655 Gene3D - 30 134 IPR038408 -
Apr8g2376 655 SMART serkin_6 328 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g2376 655 MobiDBLite consensus disorder prediction 627 646 - -
Apr8g2376 655 Pfam Protein tyrosine and serine/threonine kinase 331 599 IPR001245 GO:0004672|GO:0006468
Apr8g2376 655 ProSitePatterns Serine/Threonine protein kinases active-site signature. 449 461 IPR008271 GO:0004672|GO:0006468
Apr8g2376 655 Pfam Salt stress response/antifungal 35 132 IPR002902 -
Apr8g2376 655 Pfam Salt stress response/antifungal 155 241 IPR002902 -
Apr8g2376 655 ProSiteProfiles Gnk2-homologous domain profile. 140 244 IPR002902 -
Apr8g2376 655 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 28 654 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g2376 Apr-Chr8 34082868 34085604 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g2376 9 655 Receptor kinase-like Gene Family AT4G05200 45.710 0.0 572
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Apr8g2376 PK_Tyr_Ser-Thr 1.2e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g2376 - - aprc:113871855 1124.77