Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g2375 ATGCTTATCATCAGCTTCTCTATAACCCCATTAGCACTTTTCCCTTTGTTTCTTTTGCTCATCCACGCAAGTGAATCAGCACCCACTTACACTACCCATCGATGCAAAAACCAAACTTTTTACCAACCCAACACAACATTTCAATCCAACTTAAATACCCTCCTCTCTTCTCTCATCTCCAACTCCTCACTTCAGTCAAACAACGGTTTCTACACAACCATCATTGGTCAAAACACCCCTGACGTCGTGAACGGTCTTTTCCTCTGCCGTGGCGACGTCAACGCCACCCTCTGCCACGGCTGCGTCGCCACCGCAACAATCGACATAACACGCCTCTGTCCGGACGATAAAGAGTCCATAATCTGGTACGATTTGTGCATGTTGCGTTACTCAGACACCACCCTCAACAACAACATCGATACTGGGGTTTTCGTGTACGAACTAAGTAAGATGAACATTAGCAAGTCTAATCAGTTATTGGTTGACTTATTTAACGAGTTGGCAGAGAAAGCTGCAGCCATGGCGGAGATGAAGTTTGCTGCAGGCGAGAAGAAGTTCACGAGTACACAGACACTGTACGGAATGGCACAGTGCGTGCCCGAGTTAACAAGAGAAGGATGTGCCAATTGCGTACACACCGCTATTCGAAGTCTTCCCATGTACAGTGCAGGAGCAGACTATATGTTTCCGGCATGTCATATCAGATATCAATTGTATCCTTTTTTGTATAATACCACTTCAGAGATGCCAGGTGTTCCTTCCCCATCTTCGGCTACGAGTTATTTTATGTGTGAAGATGAGTCTTTGCGTTTTGACTTGGCTACAATAGAAGCTGTCACAAATGGATTCTCAGATGAAAATAAAATAGGCGAAGGTGGATTTGGTGAGGTTTATAAGGGTACCCTTCAGAATGGACAAGAGATAGCTGTGAAGAGGCTATCAAGAAGTTCCCGGCAGGGTGACTTGGAATTCAAGAACGAGGCTTCACTTGTTGCACAGCTTCAACATAGAAATTTAGTTAGGCTGTTAGGATTTTGCTTGGAGAGAAAGGAGAGGATACTTGTTTATGAATTCATACCAAATTCCAGCCTTGACAACTTTCTATTTGATCATGAGAACGAAGAAGAGCTAGACTGGGCAAGACGTTACAAAATTATAGTTGGACTAGCTCGAGGAATGAAGTATCTCCATGAAGATTCTAGACTAAGAATAATACATCGCGATCTCAAGGCTAGTAATGTTCTATTGGATGCGAACATGAATCCAAAGATTTCAGATTTTGGCTTGGCAAAGATTTCCCCTAATGATCAAAGTCAAGTAAATGCAGCAACAAGAAGGATAGTTGGAACATATGGTTACATGTCTCCAGAATATGCAATGCATGGAAAATACTCTGTGAAATCCGATGTGTTTAGCTTTGGAGTCTTGGTTTTGGAGATCATTCATGGCAAGAAGAACTCAAGTTATTATCGATCACATGAAGATGACGACATTTTGAGCATTACTTGGAAGAATTGGACAAATCAAACACCGTTCTTGATTTTGGATCCAAAATTGAATGGCTCGTATTCTCGAAATGAAGTTCGGAGATGCATCCACATCGCTTTATTATGCACTCAAGAAAACCCAGTTGATAGACCTTCAATGGCGACAATAGAAGTTGCGTTGAACAATTATTCTGTAACTTTAGCGTTACCTCGACAACCAGCATCTTATCTGCGATGGAGAACAACACCAGACAGATTAAGACACCAACGTGGTTCTGATGGGAACAGGTCCCCAATCCCTTCGTGTCCGAATGATTCTCTGATTACTGAGGTATATCCCCGCTAA 1833 0.4261 MLIISFSITPLALFPLFLLLIHASESAPTYTTHRCKNQTFYQPNTTFQSNLNTLLSSLISNSSLQSNNGFYTTIIGQNTPDVVNGLFLCRGDVNATLCHGCVATATIDITRLCPDDKESIIWYDLCMLRYSDTTLNNNIDTGVFVYELSKMNISKSNQLLVDLFNELAEKAAAMAEMKFAAGEKKFTSTQTLYGMAQCVPELTREGCANCVHTAIRSLPMYSAGADYMFPACHIRYQLYPFLYNTTSEMPGVPSPSSATSYFMCEDESLRFDLATIEAVTNGFSDENKIGEGGFGEVYKGTLQNGQEIAVKRLSRSSRQGDLEFKNEASLVAQLQHRNLVRLLGFCLERKERILVYEFIPNSSLDNFLFDHENEEELDWARRYKIIVGLARGMKYLHEDSRLRIIHRDLKASNVLLDANMNPKISDFGLAKISPNDQSQVNAATRRIVGTYGYMSPEYAMHGKYSVKSDVFSFGVLVLEIIHGKKNSSYYRSHEDDDILSITWKNWTNQTPFLILDPKLNGSYSRNEVRRCIHIALLCTQENPVDRPSMATIEVALNNYSVTLALPRQPASYLRWRTTPDRLRHQRGSDGNRSPIPSCPNDSLITEVYPR* 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g2375 610 CDD STKc_IRAK 289 552 - -
Apr8g2375 610 ProSitePatterns Serine/Threonine protein kinases active-site signature. 404 416 IPR008271 GO:0004672|GO:0006468
Apr8g2375 610 Pfam Protein tyrosine and serine/threonine kinase 286 554 IPR001245 GO:0004672|GO:0006468
Apr8g2375 610 Gene3D Transferase(Phosphotransferase) domain 1 359 564 - -
Apr8g2375 610 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 257 609 - -
Apr8g2375 610 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 28 256 - -
Apr8g2375 610 SMART serkin_6 283 560 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g2375 610 ProSitePatterns Protein kinases ATP-binding region signature. 289 311 IPR017441 GO:0005524
Apr8g2375 610 ProSiteProfiles Gnk2-homologous domain profile. 138 241 IPR002902 -
Apr8g2375 610 ProSiteProfiles Protein kinase domain profile. 283 563 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g2375 610 MobiDBLite consensus disorder prediction 582 601 - -
Apr8g2375 610 Gene3D Phosphorylase Kinase; domain 1 249 358 - -
Apr8g2375 610 Pfam Salt stress response/antifungal 35 132 IPR002902 -
Apr8g2375 610 Pfam Salt stress response/antifungal 157 238 IPR002902 -
Apr8g2375 610 Gene3D - 145 241 IPR038408 -
Apr8g2375 610 Gene3D - 27 134 IPR038408 -
Apr8g2375 610 SUPERFAMILY Protein kinase-like (PK-like) 268 578 IPR011009 -
Apr8g2375 610 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 257 609 - -
Apr8g2375 610 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 28 256 - -
Apr8g2375 610 ProSiteProfiles Gnk2-homologous domain profile. 29 135 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g2375 Apr-Chr8 34069516 34076989 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g2375 30 570 Receptor kinase-like Gene Family AT4G23230 46.446 0.0 524
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Apr8g2375 PK_Tyr_Ser-Thr 6.7e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g2375 - - aprc:113871855 1034.25