Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g2374 ATGTGTACCTTAAAATCCTCTCCAAAGCACTTGCTGCTTCTATCTCTCTTCACCTTCCTGTTCTTTGCAACTGAAGCGGCTCCTACATACAGCGATTCAATCTGCACAGAAGGACCCTATTACCGACCCAACACAACATTCCAAACCAACTTGAACCTCCTCCTCGCATCCCTTGTCTCCAACGCCACCCTCCACCATGGTTTCTTCCTCACCAACATCTCCCTCGGAACCCCCAATGAGGTCAAAGGAATCTTCCTCTGTCGTGGTGACGTCACCCCTTCTGTTTGTCAAGACTGTGTCACAGCTGCAGCAGAAAACATCACGCACCTCTGCCCCAACCAAACAGAGTCCATTATCTGGTACGACCAGTGCATGCTTCGTTACACCAACAATTCCTTCTTCAACAACATAGTTCCTAGCGTTAACTTGGTCGCCCAACAGAGCATCCCTGACTCTGACCGTACCCGCTTCACCGATTTTCTCGCTGCCACGTTGAAAGATCTAGCACAGAAGACTGTGAATTCTGCTTCGGGCAACAAGTTTGCTACCAAAGAAGCAGATTTCACGAGCTCAATGAAACTTTACACCCTGGCGCAGTGCGCACCCGATTTGTCCACCTTTGACTGTAACATGTGCCTAACAAGTGCCATCAGTGATATTCCATCATGCTGTGATGGGAAACAAGGTGCACGGTCCCTGCTTCCTGGTTGTAATCTCAGATATGACTTGTACCCATTTTACAATGTTTCCCCTGCACCACACCTTCCCTCTTCATCTTCAGGAAAAAGCAGTATATCAATAGTTGTGGCGATTGTTGTCCCAGTTATTGTTGCCGTGGTACTTCTCATTGTTGGCATCTGCTTCCTACGTAAGAGGGCTATCAAGAAGTACAATACGTTCATCCAGGATTCAATTGGGGAGGATCTTACTGATTTGGAGTCCTTGCAATTTGACTTGGCTACAATTGAAGCTGCCACAAACAGATTCTCAGATGAGAACAAGATTGGCCAAGGTGGGTTTGGTGTGGTTTATAAGGGTATCCTCCCTAATGGACAGGAGATAGCTGTGAAGAGGCTATCAGTAACTTCCTTGCAGGGTGCAGTTGAGTTCAGGAATGAAGCCGCCCTTGTGGCCAAGCTTCAACATAGAAATTTAGTGAGGCTATTTGGATTTTGCCTGGAGGGGCAGGAGAAGTTGCTAGTCTATGAATACATCCCAAACAAAAGCCTTGATCACTTTCTATTTGATAACGAAAAGCAAAGAGAGTTAGATTGGTCAAGACGTTACAAGATTATAGTAGGCATTGCTCGAGGAATTCTTTATTTACATGAAGATTCTCAGCTTAGAATTATACACCGTGATCTCAAAGCTAGCAATGTTCTATTAGATGAAAATATGAACCCAAAGATTTCAGATTTTGGCATGGCAAAAATTTTCCGGGCTGATCAGACTCACGTTAATACACAAAGGATAGTTGGGACTTTTGGTTATATGTCTCCAGAATATGCAATGCACGGACAGTTTTCTGTGAAATCAGATGTGTTCAGCTTCGGTGTCTTAGTTTTGGAGATTGTTAGTGGCAAGAAGAACACTGAATTTTATCAAACGAATCATGCTGATGACCTCTTAAGCTATGCTTGGAAGAATTGGCTGGAGCAAACACCTTTGGAGTTACTGGATCCAACACTGAGAAATTCTTATTCAAGAAATGAAGTCATAAGATGCATCCATATTGGTTTATTGTGTGTTCAGGAAAATCCATCTGATAGGCCTTCGCTGGCCACTATTGCACTTACGCTAAACAGTTATACAGTTTCCTTGTCGATGCCACGACAACCAGCATCTTTCCTGCACGGAAGAACTACAAACAGACTAAAGCAAGGGGTTGACTCTGATCAGTCTACCACCTGTTCATTTCCATGGTCCATGACTGAAGTATACCCTCGATAA 1950 0.4426 MCTLKSSPKHLLLLSLFTFLFFATEAAPTYSDSICTEGPYYRPNTTFQTNLNLLLASLVSNATLHHGFFLTNISLGTPNEVKGIFLCRGDVTPSVCQDCVTAAAENITHLCPNQTESIIWYDQCMLRYTNNSFFNNIVPSVNLVAQQSIPDSDRTRFTDFLAATLKDLAQKTVNSASGNKFATKEADFTSSMKLYTLAQCAPDLSTFDCNMCLTSAISDIPSCCDGKQGARSLLPGCNLRYDLYPFYNVSPAPHLPSSSSGKSSISIVVAIVVPVIVAVVLLIVGICFLRKRAIKKYNTFIQDSIGEDLTDLESLQFDLATIEAATNRFSDENKIGQGGFGVVYKGILPNGQEIAVKRLSVTSLQGAVEFRNEAALVAKLQHRNLVRLFGFCLEGQEKLLVYEYIPNKSLDHFLFDNEKQRELDWSRRYKIIVGIARGILYLHEDSQLRIIHRDLKASNVLLDENMNPKISDFGMAKIFRADQTHVNTQRIVGTFGYMSPEYAMHGQFSVKSDVFSFGVLVLEIVSGKKNTEFYQTNHADDLLSYAWKNWLEQTPLELLDPTLRNSYSRNEVIRCIHIGLLCVQENPSDRPSLATIALTLNSYTVSLSMPRQPASFLHGRTTNRLKQGVDSDQSTTCSFPWSMTEVYPR* 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g2374 649 ProSitePatterns Serine/Threonine protein kinases active-site signature. 450 462 IPR008271 GO:0004672|GO:0006468
Apr8g2374 649 Gene3D - 141 246 IPR038408 -
Apr8g2374 649 Gene3D - 28 133 IPR038408 -
Apr8g2374 649 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 7 640 - -
Apr8g2374 649 Pfam Salt stress response/antifungal 152 243 IPR002902 -
Apr8g2374 649 Pfam Salt stress response/antifungal 35 130 IPR002902 -
Apr8g2374 649 Pfam Protein tyrosine and serine/threonine kinase 332 597 IPR001245 GO:0004672|GO:0006468
Apr8g2374 649 ProSiteProfiles Gnk2-homologous domain profile. 139 246 IPR002902 -
Apr8g2374 649 Gene3D Phosphorylase Kinase; domain 1 292 404 - -
Apr8g2374 649 Gene3D Transferase(Phosphotransferase) domain 1 405 611 - -
Apr8g2374 649 SMART serkin_6 329 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g2374 649 SUPERFAMILY Protein kinase-like (PK-like) 315 617 IPR011009 -
Apr8g2374 649 ProSiteProfiles Gnk2-homologous domain profile. 29 133 IPR002902 -
Apr8g2374 649 CDD STKc_IRAK 335 601 - -
Apr8g2374 649 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 7 640 - -
Apr8g2374 649 ProSiteProfiles Protein kinase domain profile. 329 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g2374 649 ProSitePatterns Protein kinases ATP-binding region signature. 335 357 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g2374 Apr-Chr8 34063872 34067296 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g2374 13 649 Receptor kinase-like Gene Family AT4G05200 50.000 0.0 652
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Apr8g2374 PK_Tyr_Ser-Thr 1.9e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g2374 - - gmx:113000776 983.4