Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Apr8g2374 | ATGTGTACCTTAAAATCCTCTCCAAAGCACTTGCTGCTTCTATCTCTCTTCACCTTCCTGTTCTTTGCAACTGAAGCGGCTCCTACATACAGCGATTCAATCTGCACAGAAGGACCCTATTACCGACCCAACACAACATTCCAAACCAACTTGAACCTCCTCCTCGCATCCCTTGTCTCCAACGCCACCCTCCACCATGGTTTCTTCCTCACCAACATCTCCCTCGGAACCCCCAATGAGGTCAAAGGAATCTTCCTCTGTCGTGGTGACGTCACCCCTTCTGTTTGTCAAGACTGTGTCACAGCTGCAGCAGAAAACATCACGCACCTCTGCCCCAACCAAACAGAGTCCATTATCTGGTACGACCAGTGCATGCTTCGTTACACCAACAATTCCTTCTTCAACAACATAGTTCCTAGCGTTAACTTGGTCGCCCAACAGAGCATCCCTGACTCTGACCGTACCCGCTTCACCGATTTTCTCGCTGCCACGTTGAAAGATCTAGCACAGAAGACTGTGAATTCTGCTTCGGGCAACAAGTTTGCTACCAAAGAAGCAGATTTCACGAGCTCAATGAAACTTTACACCCTGGCGCAGTGCGCACCCGATTTGTCCACCTTTGACTGTAACATGTGCCTAACAAGTGCCATCAGTGATATTCCATCATGCTGTGATGGGAAACAAGGTGCACGGTCCCTGCTTCCTGGTTGTAATCTCAGATATGACTTGTACCCATTTTACAATGTTTCCCCTGCACCACACCTTCCCTCTTCATCTTCAGGAAAAAGCAGTATATCAATAGTTGTGGCGATTGTTGTCCCAGTTATTGTTGCCGTGGTACTTCTCATTGTTGGCATCTGCTTCCTACGTAAGAGGGCTATCAAGAAGTACAATACGTTCATCCAGGATTCAATTGGGGAGGATCTTACTGATTTGGAGTCCTTGCAATTTGACTTGGCTACAATTGAAGCTGCCACAAACAGATTCTCAGATGAGAACAAGATTGGCCAAGGTGGGTTTGGTGTGGTTTATAAGGGTATCCTCCCTAATGGACAGGAGATAGCTGTGAAGAGGCTATCAGTAACTTCCTTGCAGGGTGCAGTTGAGTTCAGGAATGAAGCCGCCCTTGTGGCCAAGCTTCAACATAGAAATTTAGTGAGGCTATTTGGATTTTGCCTGGAGGGGCAGGAGAAGTTGCTAGTCTATGAATACATCCCAAACAAAAGCCTTGATCACTTTCTATTTGATAACGAAAAGCAAAGAGAGTTAGATTGGTCAAGACGTTACAAGATTATAGTAGGCATTGCTCGAGGAATTCTTTATTTACATGAAGATTCTCAGCTTAGAATTATACACCGTGATCTCAAAGCTAGCAATGTTCTATTAGATGAAAATATGAACCCAAAGATTTCAGATTTTGGCATGGCAAAAATTTTCCGGGCTGATCAGACTCACGTTAATACACAAAGGATAGTTGGGACTTTTGGTTATATGTCTCCAGAATATGCAATGCACGGACAGTTTTCTGTGAAATCAGATGTGTTCAGCTTCGGTGTCTTAGTTTTGGAGATTGTTAGTGGCAAGAAGAACACTGAATTTTATCAAACGAATCATGCTGATGACCTCTTAAGCTATGCTTGGAAGAATTGGCTGGAGCAAACACCTTTGGAGTTACTGGATCCAACACTGAGAAATTCTTATTCAAGAAATGAAGTCATAAGATGCATCCATATTGGTTTATTGTGTGTTCAGGAAAATCCATCTGATAGGCCTTCGCTGGCCACTATTGCACTTACGCTAAACAGTTATACAGTTTCCTTGTCGATGCCACGACAACCAGCATCTTTCCTGCACGGAAGAACTACAAACAGACTAAAGCAAGGGGTTGACTCTGATCAGTCTACCACCTGTTCATTTCCATGGTCCATGACTGAAGTATACCCTCGATAA | 1950 | 0.4426 | MCTLKSSPKHLLLLSLFTFLFFATEAAPTYSDSICTEGPYYRPNTTFQTNLNLLLASLVSNATLHHGFFLTNISLGTPNEVKGIFLCRGDVTPSVCQDCVTAAAENITHLCPNQTESIIWYDQCMLRYTNNSFFNNIVPSVNLVAQQSIPDSDRTRFTDFLAATLKDLAQKTVNSASGNKFATKEADFTSSMKLYTLAQCAPDLSTFDCNMCLTSAISDIPSCCDGKQGARSLLPGCNLRYDLYPFYNVSPAPHLPSSSSGKSSISIVVAIVVPVIVAVVLLIVGICFLRKRAIKKYNTFIQDSIGEDLTDLESLQFDLATIEAATNRFSDENKIGQGGFGVVYKGILPNGQEIAVKRLSVTSLQGAVEFRNEAALVAKLQHRNLVRLFGFCLEGQEKLLVYEYIPNKSLDHFLFDNEKQRELDWSRRYKIIVGIARGILYLHEDSQLRIIHRDLKASNVLLDENMNPKISDFGMAKIFRADQTHVNTQRIVGTFGYMSPEYAMHGQFSVKSDVFSFGVLVLEIVSGKKNTEFYQTNHADDLLSYAWKNWLEQTPLELLDPTLRNSYSRNEVIRCIHIGLLCVQENPSDRPSLATIALTLNSYTVSLSMPRQPASFLHGRTTNRLKQGVDSDQSTTCSFPWSMTEVYPR* | 650 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Apr8g2374 | 649 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 450 | 462 | IPR008271 | GO:0004672|GO:0006468 | |
Apr8g2374 | 649 | Gene3D | - | 141 | 246 | IPR038408 | - | |
Apr8g2374 | 649 | Gene3D | - | 28 | 133 | IPR038408 | - | |
Apr8g2374 | 649 | PANTHER | RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 | 7 | 640 | - | - | |
Apr8g2374 | 649 | Pfam | Salt stress response/antifungal | 152 | 243 | IPR002902 | - | |
Apr8g2374 | 649 | Pfam | Salt stress response/antifungal | 35 | 130 | IPR002902 | - | |
Apr8g2374 | 649 | Pfam | Protein tyrosine and serine/threonine kinase | 332 | 597 | IPR001245 | GO:0004672|GO:0006468 | |
Apr8g2374 | 649 | ProSiteProfiles | Gnk2-homologous domain profile. | 139 | 246 | IPR002902 | - | |
Apr8g2374 | 649 | Gene3D | Phosphorylase Kinase; domain 1 | 292 | 404 | - | - | |
Apr8g2374 | 649 | Gene3D | Transferase(Phosphotransferase) domain 1 | 405 | 611 | - | - | |
Apr8g2374 | 649 | SMART | serkin_6 | 329 | 604 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Apr8g2374 | 649 | SUPERFAMILY | Protein kinase-like (PK-like) | 315 | 617 | IPR011009 | - | |
Apr8g2374 | 649 | ProSiteProfiles | Gnk2-homologous domain profile. | 29 | 133 | IPR002902 | - | |
Apr8g2374 | 649 | CDD | STKc_IRAK | 335 | 601 | - | - | |
Apr8g2374 | 649 | PANTHER | CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN | 7 | 640 | - | - | |
Apr8g2374 | 649 | ProSiteProfiles | Protein kinase domain profile. | 329 | 604 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Apr8g2374 | 649 | ProSitePatterns | Protein kinases ATP-binding region signature. | 335 | 357 | IPR017441 | GO:0005524 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Apr8g2374 | Apr-Chr8 | 34063872 | 34067296 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Apr8g2374 | 13 | 649 | Receptor kinase-like Gene Family | AT4G05200 | 50.000 | 0.0 | 652 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_DLSV | Apr8g2374 | PK_Tyr_Ser-Thr | 1.9e-49 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Apr8g2374 | - | - | gmx:113000776 | 983.4 |