Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g2372 ATGGCGTGGAATGCCTTCAAGCTTCTCTTTCCATTTTTCCTAGTTAGCTTCTTCCTCAGTTTTGCTACCACAGAAGCACAGACCCCAACCCTTCTAGATAAGAGTTGTTCGAGCAACAAAACCACAGCTAACAGCGCCTTTCAATTGAACCTCAGGACCCTCTTCTCTTCACTATCTTCCAAAGCCACAGCCAACAATGAATTCGACAACACCACAGTCGCAGGAACCAACCCCTCAGACACAGTCTACGGACTATTCATGTGCAGGGGTGATGTCTCTTCTCAACAGTGTGGACAGTGCGTGGTCTACGCAACACAACAACTATCATCGCTCCCAGATTGTTCCTTGTCCATACAGGCTGTGATCTGGTACGACGAGTGCATGGTTCGCTATTCCAACCGCTCTTTCTTCTCCACCGTCGTCCAAGCACCTGAAATTGCCCTCTTTAATTCCAACAACATCTCTAATCCGGAAAGCTTCATGAGTTTGTTGTTCAACACCATGAACAAAACAGCAGATAAAGCCGCTAATTCTCCTGTTGGTTTTAAGAAATACGCCACAAACCAAGCAAACATATCTCAGTTTCAATCGCTTTATTGTTTGAGTCAGTGCACAGACGACTTGTCAACCCAAGATTGCAGAAGGTGTCTTGGTACTTGCATAAGGGGCCTTTCACGGTGCTGTGAAGGGAAGCAAGGAGCGAGGATTCTAGCTCCAAGTTGTAACATTAGGTATGAATTGTATCCTTTTTATCTCTCCAACACCACTGCTCCACCATCAGCCCCACCTTCAGCCCCTGTTCCTCCAACCAATCCTCCTAATTCTGGAGGTAATGTAATTTACGCTGTGGAATCATTGAGGTTTGGTTTTAGTACAATTGAGGCAGCCACTAACAAATTCTCTGATGCTAACAAGCTGGGTGAAGGTGGATTTGGTGAGGTTTACAAGGGCTTGCTTCGAAATGGACAAGAAATAGCTGTCAAGAGACTCTCTAAAAGCTCTGGACAAGGTGGGGAAGAATTTAAGAATGAAGTAGAGGTGGTTGCAAAGCTTCAACATAGAAATTTAGTGAGGCTTCTGGGATTTTGCTTGGAAGGAGAAGAGAAGATACTTGTTTATGAATTTGTACCCAACAAAAGCCTTGACTATATTATTTTTGATCCTGAAAAGCGAAGGGCATTGGATTGGTCAAGGAGTTACAAAGTTATTGAAGGAATTGCCCGAGGCATTCAATATCTTCACGAAGATTCAAGGCTTAAAATTATACATCGTGATCTTAAAGCTAGCAACATATTATTGGATGAAGATATGAATCCAAAAATTTCAGATTTTGGCATGGCAAGAATATTTGGAGTGGACCAAACTCAAGGAAATACCAATAGGATCGTAGGGACATATGGTTATATGTCTCCGGAGTATGCAATGCATGGAGAGTACTCTGCGAAGTCTGATGTATACAGTTTCGGAGTCCTTATATTGGAGATTATAAGCGGCAAGAAGAACAGCTCCTTCTATGAATCAGATGTTGCTGAGGATCTATTGAGCTATGCCTGGAAACTTTGGAAGGATGGAGTACCCTTGGAGTTAATGGAATACTCGTTAAGAGAATCATACACTCAAAATGAAGTTATCAGATGCATTCATATTGGTTTACTGTGTGTCCAAGAAGATCCAGCAGATAGACCTACGATGGCATCAGTAATTCTTATGCTTGATAGTTTTTCTGTTACTCTACCGGTACCTAACGAGCCTGCATTTTTTCTACACACTGGAACTGGTCCAAACATGCCAAACGGGATGCAAATTGGTCAGTCTCCTAACAATTCAACAAGAAAGTCCATCAATGAGATGTCAGTGAGTGAAATAGATCCTCGATAG 1878 0.426 MAWNAFKLLFPFFLVSFFLSFATTEAQTPTLLDKSCSSNKTTANSAFQLNLRTLFSSLSSKATANNEFDNTTVAGTNPSDTVYGLFMCRGDVSSQQCGQCVVYATQQLSSLPDCSLSIQAVIWYDECMVRYSNRSFFSTVVQAPEIALFNSNNISNPESFMSLLFNTMNKTADKAANSPVGFKKYATNQANISQFQSLYCLSQCTDDLSTQDCRRCLGTCIRGLSRCCEGKQGARILAPSCNIRYELYPFYLSNTTAPPSAPPSAPVPPTNPPNSGGNVIYAVESLRFGFSTIEAATNKFSDANKLGEGGFGEVYKGLLRNGQEIAVKRLSKSSGQGGEEFKNEVEVVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYIIFDPEKRRALDWSRSYKVIEGIARGIQYLHEDSRLKIIHRDLKASNILLDEDMNPKISDFGMARIFGVDQTQGNTNRIVGTYGYMSPEYAMHGEYSAKSDVYSFGVLILEIISGKKNSSFYESDVAEDLLSYAWKLWKDGVPLELMEYSLRESYTQNEVIRCIHIGLLCVQEDPADRPTMASVILMLDSFSVTLPVPNEPAFFLHTGTGPNMPNGMQIGQSPNNSTRKSINEMSVSEIDPR* 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g2372 625 Pfam Salt stress response/antifungal 153 248 IPR002902 -
Apr8g2372 625 Pfam Salt stress response/antifungal 36 133 IPR002902 -
Apr8g2372 625 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 5 262 - -
Apr8g2372 625 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 278 623 - -
Apr8g2372 625 ProSiteProfiles Protein kinase domain profile. 300 575 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g2372 625 SUPERFAMILY Protein kinase-like (PK-like) 285 589 IPR011009 -
Apr8g2372 625 ProSitePatterns Serine/Threonine protein kinases active-site signature. 421 433 IPR008271 GO:0004672|GO:0006468
Apr8g2372 625 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 278 623 - -
Apr8g2372 625 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 5 262 - -
Apr8g2372 625 Gene3D Transferase(Phosphotransferase) domain 1 376 578 - -
Apr8g2372 625 MobiDBLite consensus disorder prediction 598 625 - -
Apr8g2372 625 Pfam Protein kinase domain 301 567 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g2372 625 Gene3D - 28 136 IPR038408 -
Apr8g2372 625 Gene3D - 145 250 IPR038408 -
Apr8g2372 625 MobiDBLite consensus disorder prediction 598 617 - -
Apr8g2372 625 Gene3D Phosphorylase Kinase; domain 1 274 375 - -
Apr8g2372 625 ProSiteProfiles Gnk2-homologous domain profile. 29 136 IPR002902 -
Apr8g2372 625 ProSitePatterns Protein kinases ATP-binding region signature. 306 328 IPR017441 GO:0005524
Apr8g2372 625 SMART serkin_6 300 575 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g2372 625 CDD STKc_IRAK 306 572 - -
Apr8g2372 625 ProSiteProfiles Gnk2-homologous domain profile. 142 250 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g2372 Apr-Chr8 34053852 34056774 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g2372 6 625 Receptor kinase-like Gene Family AT4G05200 50.733 0.0 656
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Apr8g2372 Pkinase 6.4e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g2372 - - gmx:100787420 922.924