Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g2369 ATGGCATCCTACCTCAAGCTCCAACACATCTTCCTCTTTTTCCTTCTTATCTTTCTCAATTTTGCAAAAACTAAAGCACAAGACCCAAATTTTCTCTACCAGGTTTGCTCAAAAAACAGATTCACGCCCAACAACACCTACCAAGTAGACCTGAGAACACTCCTCTCTTCCTTACCCTCCAAAGCCACCAACACCACCCAATTCTTCAACAACACCGTGACAGGAACAAACCCCTCAGACACAGTGTATGGACTATTCATGTGCAGGGGTGACATCCCCTCCGACCTATGTCATCAATGTGTCGGAAACGCAACACAACGACTAACCACAAACGCGGAGTGCTCTTTATCAGTAGAAGCTGTGATGTGGTACGACGAGTGTATGGTTCGGTATTCTAACCGTTCTTTCTTCTCCACCGTGGCCACACGGCCTGGGTATGTGCTGGCGAGCCCCACGAACATGACCAACCAAGACAGTTTCAACCGTTTATTGTATGACACCATGAACATAACTGCAGATGATGCAGCAAATTCACCAACTGGTGCCAAAAAATTTGCCACGAGGGAAGCAAACATATCTATATTTCAGAACCTTTATTGTCTGGCTCAGTGCACACAAGATCTGTCACATCAGCAGTGCAGAGGCTGTCTGAATAGTTTGATAAATTCGGACCTTCCACGGTGCTGTGCTGGTACGCAGGGAGGAAGAGTTCTATATCCTAACTGCATCATCAGGTTTGAAATTTACCCTTTCTATCGATCTCTTGCTTTTGCACCATCGCCAACACCAGCAGGATTCGTTCCTCAAGCAAATTCAGGAGAAAATAAAGGTAAATCCCGGACAATTATCTTAATTGTTGTACCCATTGTTGTCTTGGCGACGGCCCTTTCTTTTTGCGGCTATATGCTAAAGAGGAGAGCAAGAAAAAGCAAATACAAGACTCTTCTAAGAGAAAACTTTGGTCGTGAAAGTACTACTTTAGAGGGATTGCAATTCAATTTGGCTACAATTGAAGCGGCAACAAATAACTTTTCACATGAGAACAAAATTGGTAAAGGTGGATTCGGAGAAGTTTATAAGGGCACTCTTCCTGATGGACGACTTGTAGCTGTTAAGAGGCTTTCGACAAGTTCTATGCAAGGTTCAGCTGAATTCAAGAATGAGATTTTATTGATTGCCAAGTTACAACATAGAAACCTTGTGGCATTTATAGGTTTCTGTTTAGAAGAACAAGAGAAGATTCTCATTTACGAATACGTGCCGAATCGAAGCCTTGATTATTTTTTATTTGATGCTCTGCAACAAAAGTTAAGTTGGCCTGAGCGTTACAAAATTGTTGGAGGAACTGCTCTAGGAATTCTTTATCTACATGAATATTCTCGACTTAAAATTATTCACCGTGATCTCAAACCTAGTAATATTTTATTAGATGAAAATATGAACCCTAAAATATCAGACTTTGGCATGGCTAGAATTGTTGAAATTGACCAAGATCGTGGAACAACTAATAGAATTGTTGGAACATTTGGTTACATGTCTCCGGAATATGCAATGTTTGGACAATTTTCTGAAAAATCAGATGTTTTTAGTTATGGAGTCGTGATTTTAGAGATTATCACGGGAAAAAGAAATGCAAATTCTTACGAATCAAACCATATTTCTAAAGGGCTCATGAGCTATGTTTGGAGAAACTGGAAGGAGCAAACTCCATTGAGCATAGTGGATGCAAATATGAAAGAAAATTATTCTCAAGTTGAAGTTACTAAATGCATTCAAATTGGTTTACTATGTGTCCAAGAAAATCTAAATGCTAGACCTACAATGACAACAGTTGTTTCATATCTTAATAATCTCTCGCTTGACCTACCATCTCCCCAAGAACCGGCATTTTCCTTGCATGGTAGAACACACCAAAAAATTTCTGCACAACAAGAATCAAGTTCTGGTCAATCTGCCAATAGTTCTACACCTTTCTCTGTTAATGAGATGTCTGTGAGTAAATTTTATCCTCGATGA 2016 0.4003 MASYLKLQHIFLFFLLIFLNFAKTKAQDPNFLYQVCSKNRFTPNNTYQVDLRTLLSSLPSKATNTTQFFNNTVTGTNPSDTVYGLFMCRGDIPSDLCHQCVGNATQRLTTNAECSLSVEAVMWYDECMVRYSNRSFFSTVATRPGYVLASPTNMTNQDSFNRLLYDTMNITADDAANSPTGAKKFATREANISIFQNLYCLAQCTQDLSHQQCRGCLNSLINSDLPRCCAGTQGGRVLYPNCIIRFEIYPFYRSLAFAPSPTPAGFVPQANSGENKGKSRTIILIVVPIVVLATALSFCGYMLKRRARKSKYKTLLRENFGRESTTLEGLQFNLATIEAATNNFSHENKIGKGGFGEVYKGTLPDGRLVAVKRLSTSSMQGSAEFKNEILLIAKLQHRNLVAFIGFCLEEQEKILIYEYVPNRSLDYFLFDALQQKLSWPERYKIVGGTALGILYLHEYSRLKIIHRDLKPSNILLDENMNPKISDFGMARIVEIDQDRGTTNRIVGTFGYMSPEYAMFGQFSEKSDVFSYGVVILEIITGKRNANSYESNHISKGLMSYVWRNWKEQTPLSIVDANMKENYSQVEVTKCIQIGLLCVQENLNARPTMTTVVSYLNNLSLDLPSPQEPAFSLHGRTHQKISAQQESSSGQSANSSTPFSVNEMSVSKFYPR* 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g2369 671 SMART serkin_6 344 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g2369 671 Pfam Salt stress response/antifungal 152 248 IPR002902 -
Apr8g2369 671 Pfam Salt stress response/antifungal 36 133 IPR002902 -
Apr8g2369 671 ProSiteProfiles Protein kinase domain profile. 344 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g2369 671 Gene3D - 28 136 IPR038408 -
Apr8g2369 671 Gene3D - 145 251 IPR038408 -
Apr8g2369 671 ProSiteProfiles Gnk2-homologous domain profile. 142 251 IPR002902 -
Apr8g2369 671 ProSiteProfiles Gnk2-homologous domain profile. 29 136 IPR002902 -
Apr8g2369 671 CDD STKc_IRAK 350 618 - -
Apr8g2369 671 Gene3D Phosphorylase Kinase; domain 1 304 419 - -
Apr8g2369 671 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 20 257 - -
Apr8g2369 671 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 269 658 - -
Apr8g2369 671 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 269 658 - -
Apr8g2369 671 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 20 257 - -
Apr8g2369 671 MobiDBLite consensus disorder prediction 636 663 - -
Apr8g2369 671 SUPERFAMILY Protein kinase-like (PK-like) 329 643 IPR011009 -
Apr8g2369 671 MobiDBLite consensus disorder prediction 631 671 - -
Apr8g2369 671 ProSitePatterns Protein kinases ATP-binding region signature. 350 372 IPR017441 GO:0005524
Apr8g2369 671 Gene3D Transferase(Phosphotransferase) domain 1 420 624 - -
Apr8g2369 671 Pfam Protein kinase domain 345 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g2369 671 ProSitePatterns Serine/Threonine protein kinases active-site signature. 464 476 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g2369 Apr-Chr8 34038087 34041159 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g2369 3 671 Receptor kinase-like Gene Family AT4G05200 46.188 0.0 592
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Apr8g2369 Pkinase 2.3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g2369 - - vun:114191422 963.755