Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g2367 ATGGCGTCCTGGAAGCTTGTGTACCTCTTTACCCTTGTCGGCTTCATCAACTTCGTAGCCACTAAAGCACAGGACTATGACAACGGTGGTGGCTGGTTCTCCTCCTGTTCAAACTCCACAACCACCCCAGACAGAGCCTTCCAAGCGAACGTGAGGACCCTCCTCTCTTATTTAATTTCCAACGCAACCGCTAACAAGCAATTCTACAACACCACAGTCACTGGCAGAAACCACTCTGACTCAGTCTATGGAATGTTCATGTGTTGGGATGACCTCCCCCCACCGCTCTGTGGCCAGTGCGTCGCAAACGCAACCCAAAGATTATTCTCAGACTCATATCTAGATTGTTCCTCGTACAAAACTGGATGGATTGAGAACGATGCCTGCATGATTCGCTTTTCCAACCGCTCTTTCTTCTCCACCGTTGACATGGATTCATCTTCCAGTTGGTGCATCTCTTTCAACGTGACCAACGAAATGAATTTGTTATCCAAAACCATAAACGAATCGGCAGATGAGGCAGCCAATTCTATTGGTGCCAAGAAATACGCCACGAAACAAGCAAGGATATATGGATTTCATACCCTTTATTTGGAAGCTCAGTGCACGCCCGATCTGTCCCCCCAAGATTGCAGAAAGTGTCTAAATGCTACCCTAGTGAATGGTCAACGGCAATGTAACGCAGGCTTAGCGAGGTTCTTTTATCCAAGTTGTAAATTGAGGTATGACGTGTACCCTTTCTATCGCCCCACCACCACTCCGCCCCCGACGGGACTCGTTCCCTTCACTGATTATTCCAATACATACTCACCACATCCTGTTTATCTTTCTCACAATTGTTCCAACAACGAAACCATCACCACCACAGACACAGCTTTTCTACTCAATCTCAGAACCCTCCTTTCTTCTCTGTCTTCCAACGCCACTGCCAAAACCGGTTTCTTCAAGACCACCGTCCACACGCTCACTGGCCTCTTCATGTGCCGCGGGGATCTTTCCTCTACGCTCTGTCAGCTATGTATCCAAACCGCAACCCAACGAATATCCTCAGAATGCCCCTTCTCCAAAGAGGCTATCGTTTGGTTCGATCACTGTTTGCTTCGCTATTCCAATCGCTCTTCTCTCTCCACGGTGGACACCACTCCCACTTATCGCCACTTCAATATCCACAATACTTCCAACCCCAACCTGCTGCAAAGCTTATTCACATGGACTTTGGCGAATACTTTATCTGAATTGGAGATCCAGACAGGGGACAGTACTGTTAAGAATTATGGAACAAGATCAGTCAAATTGAATGATCACCAAACCCTCTATACTCTTGCTCAATGCACGCCAGATCTATCTAATGTCGATTGCCGCACCTGTCTAGACAACATTTTCAGAAGCGAAATTGCATGGTGTTGTCTGGCGAGTCCAGAGGGGGAAGTACTGAATCCTAGCTGCTATATGATGTTTGGATTGTCCCAATTTTACAGAGTCGGTGACCAATTAGTTGAGGTTAACACGCTAGCTACTCCTCCAACAACCACCGCAGAAAACGAAAAAGTTGGCTCACAAACAATTATCTTCATTGTTGTCGCTATCGTTGTCTCGGCGGCATTCCTTTCCTTTTGCTGCTATTTGCGAAGGAGAAATGCAAGAAAAAGTAATTATAAGAATCTTCTCAGAAAAAACTTTGGTCAGGAAAGTACCACTTTAGAAGGGTTGCAATTTGATTTGACTATAATTAAAGCAGCAACAAATAATTTTTTGCGAGAAAATAAGATCGGCAAAGGTGGATTTGGAGAAGTTTACAAGGGTATTCTTTACGATGGACGACATGTAGCTGTCAAGAGACTTTCAACAAGTTCTAAACAAGGCTCAGTGGAGTTTAAGAATGAAATTTTGTTGATAGCAAAGCTACAACATAAAAATCTTGTGACATTTATAGGATTTTGCTTAGAAGAGCAAGAAAAGATTCTTGTTTATGAATACATGCCAAATGGGAGCCTTGATTACCTTTTATTTGGCACTCGACAAAACAAGTTAAGTTGGCTTGAGCGTTATAAAATTATAAGAGGAACTGCTCTGGGACTTCTTTATTTACATGAATATTCACGACTTAAAATTATTCATCGTGATCTTAAACCTAGCAATGTTCTTTTAGATGAAAATATGAACCCTAAAATATCAGATTTTGGCATGGCTAAAATTGTTGAAATGGATCAAGATTATGGAAATACCAAAAGGATTGTTGGAACATATGGTTATATGTCGCCAGAATATGCAATGCTCGGACAATTTTCTGAAAAATCAGATGTTTTTAGTTTTGGTGTCATGATTCTTGAAATTATTAGTGGAAAAAAGAATTTAAATTCGTATGAATCAAACAATATTGTTGAAGGTCTCACGGGTTATGTTTGGAGACAATGGAAAGATCAAACTCCATTAAGCATCTTAGACTCAAACATTGAAGAAAGTTATTCACAAATGGAAGTTCTTAAATGCATACACGTTGGTTTACTATGTGTTCAAGAAAATCCGAATGTTAGACCTACAGTGGCAACAGTTATTTCATATCTTAACAGTCATTTACTTGAATTGCCATCTCCACAAGAACCTGCTTTTTTCTTACACAGACCTAGAATTGATAAAGAAATAATTACTCAAGAGTCAACTTCCAGTCAAGCTCCCAATGGTTCCACGCTATTCTCTATTAATGAAATGTCCACAAGTAAATTTTATCCTCGATAA 2736 0.4134 MASWKLVYLFTLVGFINFVATKAQDYDNGGGWFSSCSNSTTTPDRAFQANVRTLLSYLISNATANKQFYNTTVTGRNHSDSVYGMFMCWDDLPPPLCGQCVANATQRLFSDSYLDCSSYKTGWIENDACMIRFSNRSFFSTVDMDSSSSWCISFNVTNEMNLLSKTINESADEAANSIGAKKYATKQARIYGFHTLYLEAQCTPDLSPQDCRKCLNATLVNGQRQCNAGLARFFYPSCKLRYDVYPFYRPTTTPPPTGLVPFTDYSNTYSPHPVYLSHNCSNNETITTTDTAFLLNLRTLLSSLSSNATAKTGFFKTTVHTLTGLFMCRGDLSSTLCQLCIQTATQRISSECPFSKEAIVWFDHCLLRYSNRSSLSTVDTTPTYRHFNIHNTSNPNLLQSLFTWTLANTLSELEIQTGDSTVKNYGTRSVKLNDHQTLYTLAQCTPDLSNVDCRTCLDNIFRSEIAWCCLASPEGEVLNPSCYMMFGLSQFYRVGDQLVEVNTLATPPTTTAENEKVGSQTIIFIVVAIVVSAAFLSFCCYLRRRNARKSNYKNLLRKNFGQESTTLEGLQFDLTIIKAATNNFLRENKIGKGGFGEVYKGILYDGRHVAVKRLSTSSKQGSVEFKNEILLIAKLQHKNLVTFIGFCLEEQEKILVYEYMPNGSLDYLLFGTRQNKLSWLERYKIIRGTALGLLYLHEYSRLKIIHRDLKPSNVLLDENMNPKISDFGMAKIVEMDQDYGNTKRIVGTYGYMSPEYAMLGQFSEKSDVFSFGVMILEIISGKKNLNSYESNNIVEGLTGYVWRQWKDQTPLSILDSNIEESYSQMEVLKCIHVGLLCVQENPNVRPTVATVISYLNSHLLELPSPQEPAFFLHRPRIDKEIITQESTSSQAPNGSTLFSINEMSTSKFYPR* 912
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g2367 911 SMART serkin_6 584 855 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g2367 911 ProSiteProfiles Gnk2-homologous domain profile. 383 491 IPR002902 -
Apr8g2367 911 ProSiteProfiles Gnk2-homologous domain profile. 274 374 IPR002902 -
Apr8g2367 911 ProSiteProfiles Gnk2-homologous domain profile. 140 247 IPR002902 -
Apr8g2367 911 Gene3D - 31 138 IPR038408 -
Apr8g2367 911 Gene3D - 381 491 IPR038408 -
Apr8g2367 911 Gene3D - 149 247 IPR038408 -
Apr8g2367 911 Gene3D - 273 373 IPR038408 -
Apr8g2367 911 Gene3D Phosphorylase Kinase; domain 1 544 659 - -
Apr8g2367 911 Pfam Salt stress response/antifungal 36 135 IPR002902 -
Apr8g2367 911 Pfam Salt stress response/antifungal 399 486 IPR002902 -
Apr8g2367 911 Pfam Salt stress response/antifungal 161 244 IPR002902 -
Apr8g2367 911 Pfam Salt stress response/antifungal 280 371 IPR002902 -
Apr8g2367 911 ProSitePatterns Serine/Threonine protein kinases active-site signature. 704 716 IPR008271 GO:0004672|GO:0006468
Apr8g2367 911 ProSitePatterns Protein kinases ATP-binding region signature. 590 612 IPR017441 GO:0005524
Apr8g2367 911 Pfam Protein kinase domain 586 851 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g2367 911 SUPERFAMILY Protein kinase-like (PK-like) 568 886 IPR011009 -
Apr8g2367 911 ProSiteProfiles Gnk2-homologous domain profile. 29 138 IPR002902 -
Apr8g2367 911 ProSiteProfiles Protein kinase domain profile. 584 859 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g2367 911 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 32 260 - -
Apr8g2367 911 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 510 884 - -
Apr8g2367 911 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 273 500 - -
Apr8g2367 911 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 273 500 - -
Apr8g2367 911 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 510 884 - -
Apr8g2367 911 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 32 260 - -
Apr8g2367 911 CDD STKc_IRAK 590 856 - -
Apr8g2367 911 Gene3D Transferase(Phosphotransferase) domain 1 660 862 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g2367 Apr-Chr8 34026676 34031019 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g2367 268 911 Receptor kinase-like Gene Family AT4G05200 41.931 1.83e-168 505
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Apr8g2367 Pkinase 1.5e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g2367 - - gmx:100785282 1228.39