Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g2366 ATGGGTTCTTTTCATTTGCTCCTTCTGCTTCCAACTTTCTTTTCGCTCTTTGTTCACTGCTCTTCCTTTCCTATCACTGAAGCAGCTATCGATCAAGCTTCGAAAGCTTACTATAACTGCACAACGAACGCCACTTTTGCTGCCTATAGCGCTTACCGTTCCAACGTCAAAACGCTCCTAGATTGGCTCTCCTCCAATGGCACTAACAATGCCAGATTCTACAACACCACAGTTACTAGCAAAAACACTGCAGACACAGTCTATGGTGACTTCATTTGTGTAAGAGAGATCAACCAAAAACGTTGCCAAGAATGCGTAACAGAAGCAGCCAAACTTATATCATCACTATGCACAACCGCAAAAGAAGCCATACTCTGGTACCAAGTATGCTATGTGCGCTATTCTGATCGTTGTTTCTTCTCTACCGTGGAGGAAAGTCCTAAACTTTCCTTCATGAACGTTCACGATTATGTGGGCGATGTTGGGCGCTTCAACAATATTCTGTGGGATATGATGAACGATTTGAGAACTGAGGCAGCAAGTGCTTCCAATAAATCAGCTGACAAAGAAGTAAACATCACAGACAACCAAAAGCTATATGGCTCCGCTTGGTGCCTTCCATATCATTCCAAAGACAACTGCAGCTGGTGTCTTAGTGATGCCATAGCAGAAATTCCAACCAGTTGCTGCAAAGGAAAAACTGGAGGATCAATAATATATCCCAGTTGTTTTGTTAGATATGAATTATATCCATTCCACAAGTCACACATCAGGGGTGATTTGTTGCCGCAGCCACCACTGCCCAACAGTCCTCCTCCTATTACTTCACCAGGAAAAAGAAAACAGAAGACACTGACAACGATTGTGATCGTTGTTCCAATTGTTGTTTCACTGGTGGTTTTATTTGTGGGCTGCTGCTGTTTTCAATGCAGAAAAGAAAGAAAAAAGCAACATGATATTCTCAAAGAAAGCTTTGGGAATGAAAGCACCACTTTGGAGTCCTTGCGATTTGAATTAGCCAAAATTGAAGCTGCAACAAACAAATTTGCTAAAGAGAACAGGATCGGCAAAGGCGGATTTGGAGAAGTCTACAGGGGTATTCTGTCAGATGGACAAGAAATAGCTGTGAAGAGGCTTACTGGAAGCTCCCGGCAAGGTGCAGTGGAGTTTAAAAACGAGGTTCAAGTTATCGCCAAGCTTCAACACAGAAATCTAGTGAGGTTGCTTGGATTTTGCTTAGAAGGTGAAGAAAAGATACTCATTTATGAGTACGTGCCAAACATGAGTCTTGATTATTTTTTATTGGATACCAAGAAGCGAAGACTACTATCTTGGTCTGAACGCCAGAAGATCATCATAGGAATTGCTCGAGGAATTCTATATCTACACGAGGATTCTTGCCTCAAAATAATACACCGTGATTTAAAACCTAGTAATGTTCTGTTAGACAGTAATATGAATCCAAAAATCTCAGATTTTGGGATGGCTAGAATTGTTGCTGCTGATAAAATTGAAGAAAGCACAGGCAGAATTGTAGGGACATATGGCTATATGTCTCCAGAATATGCAATGTATGGACACTTTTCTGTGAAATCTGACGTTTTTAGTTTTGGAGTCATGGTTCTGGAGATTATTCATGGGAAGAGGAAAGGTTGTTCTTCTGAACCAGAGGGTATTGATGACATCCGGAGACACGCTTGGACAAAATGGACAGAGCAAACGCCTCTGGAACTATTGGATCCTAATATGGAAGGACCTTATGCACGAGAAGAAGTCATCAAATGCATTCACATTGGTCTGTTATGCGTTCAGGAAGATCCAAACGATAGACCCACAATGGCAACGGTTGTGTTTTACCTCAACAGCCCTTCAATCAACTTGCCATCCCCTCATGAACCAGGATATTTTAAGCGTGATAAAATAGAAGACAACAAGACGACCAACAAAGAATTTGATTATACCAGTGATTCCATTAACGGAATTACCCTAACCAAATTCTTTCCTCGTTAA 2010 0.4134 MGSFHLLLLLPTFFSLFVHCSSFPITEAAIDQASKAYYNCTTNATFAAYSAYRSNVKTLLDWLSSNGTNNARFYNTTVTSKNTADTVYGDFICVREINQKRCQECVTEAAKLISSLCTTAKEAILWYQVCYVRYSDRCFFSTVEESPKLSFMNVHDYVGDVGRFNNILWDMMNDLRTEAASASNKSADKEVNITDNQKLYGSAWCLPYHSKDNCSWCLSDAIAEIPTSCCKGKTGGSIIYPSCFVRYELYPFHKSHIRGDLLPQPPLPNSPPPITSPGKRKQKTLTTIVIVVPIVVSLVVLFVGCCCFQCRKERKKQHDILKESFGNESTTLESLRFELAKIEAATNKFAKENRIGKGGFGEVYRGILSDGQEIAVKRLTGSSRQGAVEFKNEVQVIAKLQHRNLVRLLGFCLEGEEKILIYEYVPNMSLDYFLLDTKKRRLLSWSERQKIIIGIARGILYLHEDSCLKIIHRDLKPSNVLLDSNMNPKISDFGMARIVAADKIEESTGRIVGTYGYMSPEYAMYGHFSVKSDVFSFGVMVLEIIHGKRKGCSSEPEGIDDIRRHAWTKWTEQTPLELLDPNMEGPYAREEVIKCIHIGLLCVQEDPNDRPTMATVVFYLNSPSINLPSPHEPGYFKRDKIEDNKTTNKEFDYTSDSINGITLTKFFPR* 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g2366 669 Gene3D - 33 139 IPR038408 -
Apr8g2366 669 Gene3D - 150 252 IPR038408 -
Apr8g2366 669 SUPERFAMILY Protein kinase-like (PK-like) 332 633 IPR011009 -
Apr8g2366 669 Gene3D Transferase(Phosphotransferase) domain 1 425 627 - -
Apr8g2366 669 CDD STKc_IRAK 355 621 - -
Apr8g2366 669 ProSiteProfiles Protein kinase domain profile. 349 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g2366 669 Pfam Protein tyrosine and serine/threonine kinase 352 617 IPR001245 GO:0004672|GO:0006468
Apr8g2366 669 ProSitePatterns Serine/Threonine protein kinases active-site signature. 470 482 IPR008271 GO:0004672|GO:0006468
Apr8g2366 669 ProSiteProfiles Gnk2-homologous domain profile. 145 252 IPR002902 -
Apr8g2366 669 ProSiteProfiles Gnk2-homologous domain profile. 34 139 IPR002902 -
Apr8g2366 669 ProSitePatterns Protein kinases ATP-binding region signature. 355 377 IPR017441 GO:0005524
Apr8g2366 669 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 10 669 - -
Apr8g2366 669 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 10 669 - -
Apr8g2366 669 SMART serkin_6 349 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g2366 669 Gene3D Phosphorylase Kinase; domain 1 299 424 - -
Apr8g2366 669 Pfam Salt stress response/antifungal 161 250 IPR002902 -
Apr8g2366 669 Pfam Salt stress response/antifungal 40 136 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g2366 Apr-Chr8 34021340 34024293 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g2366 12 669 Receptor kinase-like Gene Family AT4G05200 43.368 0.0 555
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Apr8g2366 PK_Tyr_Ser-Thr 1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g2366 - - gmx:100793219 1098.96