Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Apr8g2349 | ATGGTGAGGGTTAGTGTCTTGAATGATGCTCTCAAGAGCATGTACAATGCCGAGAAAAGGGGGAAGCGCCAGGTCATGATTAGGCCATCCTCCAAAGTGATTATAAAATTCCTTTTGGTGATGCAGAAGCATGGATACATCGGGGACTTCGAATATGTCGATGATCACAGGGGTGGCAAAATTGTGGTAGAATTGAATGGTAGATTGAACAAATGTGGTGTTATTAGTCCCCGCTTTGATGTGGGTGTCAAAGAGATAGAAGGTTGGACTGCAAGACTGCTTCCCTCAAGACAGTTTGGGTATATTGTCTTGACTACCTCTGCTGGTATCATGGATCATGAAGAGGCTAGGAGAAAGAATGTCGGTGGTAAAGTGCTGGGTTTCTTCTACTAG | 393 | 0.4453 | MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGDFEYVDDHRGGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY* | 131 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Apr8g2349 | 130 | PANTHER | 40S RIBOSOMAL PROTEIN S15A | 1 | 130 | IPR000630 | GO:0003735|GO:0005840|GO:0006412 | |
Apr8g2349 | 130 | Gene3D | - | 70 | 130 | - | - | |
Apr8g2349 | 130 | ProSitePatterns | Ribosomal protein S8 signature. | 100 | 117 | IPR000630 | GO:0003735|GO:0005840|GO:0006412 | |
Apr8g2349 | 130 | Hamap | 30S ribosomal protein S8 [rpsH]. | 2 | 130 | IPR000630 | GO:0003735|GO:0005840|GO:0006412 | |
Apr8g2349 | 130 | Gene3D | - | 1 | 69 | - | - | |
Apr8g2349 | 130 | Pfam | Ribosomal protein S8 | 7 | 130 | IPR000630 | GO:0003735|GO:0005840|GO:0006412 | |
Apr8g2349 | 130 | PANTHER | BNAA02G06730D PROTEIN | 1 | 130 | - | - | |
Apr8g2349 | 130 | SUPERFAMILY | Ribosomal protein S8 | 4 | 130 | IPR035987 | GO:0003735|GO:0005840|GO:0006412 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Apr8g2349 | Apr-Chr8 | 33888581 | 33890037 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Apr8g2349 | 1 | 130 | Cytoplasmic Ribosomal Protein Gene Family | AT5G59850 | 96.923 | 1.68e-92 | 261 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Apr8g2349 | K02957 | - | pvy:116126673 | 258.84 |