Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g2343 ATGGCGATGGAAGAGAGCATGCTGACTCTCTTTCTTCTCCTTATGCTTCTTCTTGTCATCATTCTTATCTTCTTTGCCTGCAAACCATGGCGCTTCTTTTTCGCTTCCCCTTCCCACTCCTCCATCAAGGATGGTGAGCTGGAGAGGCCCCTTGTTGCGGAAGATATAAATGTGTCACATAATCAGAGTGCTGAATTGCCTCGACATTATGATATTGAGGGTGCCAGCTACCCGAATGAAAGTAATCTGCACTTGCCTCCAACCCATGGACTTGTTAATAAGCAAAGGCTTCCTGCTGTGCCTTTTTCTTCTAATGTGTCTCAAGATGTAATTTGTGATCCTTCAGAAGATGTTTCTGTTGGTCAAACACTTAAGCTGTCCCCAGCCCAGTTAGCAGAAATTCAAAAGCATACTAGAGAAAGCATTGAAAATGATAGACTGCAAGACATTGTGCAAAGTGATATCTTAGATCAAAGATGTTGCCTCACCCTGGAAGTTATCGATGGTCCTTCTCGGGGACTTCATTGTTCTGTACAGTCAACAAATCCTTCTGATCTACCATTGACCTTGGGAAGAGTTCCTCCAAGTGATTTGTTGATAAAAGATTCAGAAGTGTCAGGAAAGCATGCTCAAATAAAGTGGAATTTGGACAAAATGAAATGGGAGTTGGTAGATATGGGTAGCCTAAATGGAACACTTTTGAATTCTCGGCCAATCAACCATGAAGACACTGAAAGCAGGCATTGGGGTGATCCAATGGATCTTACTAATGGGGATATCATAACACTTGGAACAACATCAAGAGTAATTGTTCATATTACTCCACAAAATCAGCAGCACATTCCCTTTGGAGTGGGTATGGCATCAGATCCCATGGCTTTGCATCGAGGCCGAAAAAAATTGACTATGGAAGATGTTTGCTATTATCAATGGCCTCTACCTGCGCTGAATCAGTTTGGACTGTTTGGCATTTGTGATGGGCATGGTGGAGATGGGGCTGCCAAGGCTGCTAGCAAACTTTTTCCAGATATAATTGCCAGTATATTATCAAATTCATTAATGCAAGAGAAGGTTTTATCACTCCGTGATGCTTCAGATATTCTTCGAGATGCATTTTCTCAAACAGAAGCATCCATGAATCACCATTATGAGGGATGCACAGCAACAGTGCTTCTGGTGTGGGCTGATGATGATGGAAATTTTTTTGCACAATGTGCAAATGTTGGAGATTCCACCTGTATTATAAGTGTTGATGAGAAGCAAATCATGATGACAGAAGATCATAAATTAACAAATGATTCAGAAAGACTCAGAATTGAAAAGACAGGTGAACCGTTGAAAGATGGGGAAACACGTCTATATGGTATAAATCTTGCAAGGATGCTTGGGGACAAATTCCTGAAACAGCAGGATCCACGGTTCAGTTCAGAGCCTTTTATCAGTGAAGTTGTGCATATTGATCAAGCAAGCAGGGCCTTTGCCATTCTAGCTAGTGACGGATTATGGGATGTTGTCTGTGTGAAGAAGGCAATTCAGCTTGTGCTTCAGATGAGAGAGGGATACTCCAATGATAGAGAGAATTTGGCAGAAAAGATTGCCAATTGCTTATTGAATGAGGCTAAAACACTCAGAACGAAAGACAATACCTCTGTAATCTTCTTGGATTTCGATTCCTTGGCCAGATAG 1686 0.417 MAMEESMLTLFLLLMLLLVIILIFFACKPWRFFFASPSHSSIKDGELERPLVAEDINVSHNQSAELPRHYDIEGASYPNESNLHLPPTHGLVNKQRLPAVPFSSNVSQDVICDPSEDVSVGQTLKLSPAQLAEIQKHTRESIENDRLQDIVQSDILDQRCCLTLEVIDGPSRGLHCSVQSTNPSDLPLTLGRVPPSDLLIKDSEVSGKHAQIKWNLDKMKWELVDMGSLNGTLLNSRPINHEDTESRHWGDPMDLTNGDIITLGTTSRVIVHITPQNQQHIPFGVGMASDPMALHRGRKKLTMEDVCYYQWPLPALNQFGLFGICDGHGGDGAAKAASKLFPDIIASILSNSLMQEKVLSLRDASDILRDAFSQTEASMNHHYEGCTATVLLVWADDDGNFFAQCANVGDSTCIISVDEKQIMMTEDHKLTNDSERLRIEKTGEPLKDGETRLYGINLARMLGDKFLKQQDPRFSSEPFISEVVHIDQASRAFAILASDGLWDVVCVKKAIQLVLQMREGYSNDRENLAEKIANCLLNEAKTLRTKDNTSVIFLDFDSLAR* 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g2343 561 SUPERFAMILY SMAD/FHA domain 161 273 IPR008984 GO:0005515
Apr8g2343 561 ProSiteProfiles Forkhead-associated (FHA) domain profile. 188 239 IPR000253 GO:0005515
Apr8g2343 561 SUPERFAMILY PP2C-like 292 558 IPR036457 -
Apr8g2343 561 SMART PP2C_4 278 554 IPR001932 -
Apr8g2343 561 PANTHER PROTEIN PHOSPHATASE 2C 70 33 559 - -
Apr8g2343 561 Gene3D - 293 560 IPR036457 -
Apr8g2343 561 CDD PP2Cc 295 556 IPR001932 -
Apr8g2343 561 Gene3D - 157 292 - -
Apr8g2343 561 PANTHER PROTEIN PHOSPHATASE 2C 33 559 IPR015655 GO:0004722|GO:0006470
Apr8g2343 561 ProSiteProfiles PPM-type phosphatase domain profile. 284 556 IPR001932 -
Apr8g2343 561 Pfam FHA domain 189 264 IPR000253 GO:0005515
Apr8g2343 561 ProSitePatterns PPM-type phosphatase domain signature. 321 329 IPR000222 GO:0043169
Apr8g2343 561 SMART FHA_2 187 239 IPR000253 GO:0005515
Apr8g2343 561 Pfam Protein phosphatase 2C 300 549 IPR001932 -
Apr8g2343 561 CDD FHA 162 267 IPR000253 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g2343 Apr-Chr8 33832769 33837867 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g2343 6 558 PP2C-type Phosphatase Gene Family AT5G19280 56.923 0.0 624
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g2343 K01090 - gmx:100170643 788.489