Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g2322 ATGATCACATCAACGTTTGAGAAAACAGCACCGATGTTTGCTCAATGTGTAGTTCTAGCCTTTTTTCTGAGATTCAGCTCCATTAATAGTTTGCCTCACCCTTTAGACCCTCTCTCACCTTCTGAAATCAACAAAACAAGGGACATAGTTCAAGGATCTTACCTTGGTGTTATTCCTAATCTGACCTATCATTTTGTGGATGTGGAGGAACCAGACAAAAAGGATGTCCTAAAGTGGCTAAATTCAAATACAAAGGACGAGTCTATTATTCTTCGCCAAGCCAAGGTAGTTGTTCGAGCCAAGGGTGAGACACACGAGCTTGTAGTGGACTTAACAAGAGGGTCCATTGTATCGGATAAAATCTACACAGGTCATGGATACCCTCCTTTGACATTCCGTGAGCTTTTTCAAGCCAGCAAATTGCCACTTAAATATCCCAAATTCAAAGAGTCAATAGCCAAAAGGGGCTTGAATTTGTCTGCAGTTTCTTGTGTACCATTTACCATTGGTTGGTATGGAGAACAAATCACAAGGAGAGCCCTCAAAGTGGTATGCTTTTATAGGGGAGGATCAGTAAATGTGTGGGCAAGGCCTATTGAGGGAATCACAGTGCTAGTTGATGTTGATTCAATGCAAATTATTATGTATAATGACAGGTACAGGGCCCCTTTGCCTAAAGCTGAAGGGACAGATTTTCAATCTTCAAGTAGCAGCAGGCCTAAAATTTCTGCTTCCTGTAATGTATCAGATATTGGGTTCACCATCAAAGACCATGTAGTCAAATGGGCTAATTGGGTTTTCCATGTTGGGTTCAATGCTAGGGCAGGAATGATCATATCAACTGCTTCTATATTTGATGCCAAAAAGCAAAAGTATAGAAGAGTGCTATATAGGGGTCATGTATCTGAGACATTTGTTCCTTACATGGATCCTACAAATGAATGGTATTTCAGGACTTTCATGGATGCTGGAGAATTTGGTTTTGGACGTGCAGCTGATAGCTTGCAACTGAGGCTTGATTGCCCGGGCAATGCAGAGTATATGGATGGCTATATGGCTGGACCTAATGGAGAAGTGCAACAAGTACCCAGTGCTATTTGCATTTTTGAGAGGCATTCCGGCAATGTAGCTTGGAGGCACATGGAAATCAACAACCCCATCAAAATGATAAGAAATGGAGAGCCTGAAATTACTTTGGTGGTCAGAATGGTTGCTACTGTGGGCAACTACGATTATGTTCTTGATTGGGAATTTCTGAGAAGTGGCAGTATAAAAGTTGGGGTGGATCTGACAGGCATAATGGAGATGAAAGCAGTACCCTACACAGAGAACGGTCAGATAAAAGAAAGTGTGTTTGGAACCTTGGTGGCAGAAAATACAATAGCTAATTATCATGATCACTATATAACCTACTATCTTGACCTTGACATCGATGATAACAGCAACTCCTTCATCAATGCCAAGATACAGAAGAAAACGGCAACTGGCTTTGGAACACCAAGGAAGAGTTACTGGACAGTTGTCAGAGAAATTGCAAAGAGGGAAGCCGAGGGTAGAATTCGGCTCGGCTTGGAGCCAGCTGATCTTTTAATAGTCAACCCCAACAGAAGGACTAAGCTGGGGAATCAAGTGGGCTACCGGCTGATCAGTGCACAACCGGTTACTTCTCTCTTGTCTGATGATGATTTCCCTCAAAGAAGAGCTTCTTACACAAAGTATCAGTTGTGGGTCACTCCCTATAACAAGTCAGAGAGATGGGCTGCAGGGTTCTATGCTGACAGGAGCCGTGGAGATGATGGCTTAGCCGTCTGGAGCCAGAGGAACAGAGAGATTGAGAATACAGACATAGTGCTATGGCACACAATTGGGATCCATCACATTCCTTATCAAGAAGATTTTCCAGCAATGCCAGCAATTCATGGTGGATTTGAGCTGAGGCCTGCTAACTTTTTCGAAAGTAGTCCATTGGGATTGCGCACAGTTGACACCAACAATTCGATTGAATTAGGCTCTAGCCTTGTTGCTGGCACTAATTCATCATGGCGATCGCTCTCTGGTGATTTTGCTTTTGGGTTCTACCCTCTTGGTACTGGTCACTATCTTGTTGGAATTTGGTTTGATAAGATTCCACAGAAAACACTGGTTTGGTCTGCAAACCGTGATGATCCAGCTCAAATTGGCTCATCCATCACTCTTACATTGAGTGGTCAATTTATGCTGCAACATCCGAACAAGGCTTCATTTCCAATCTACAATGGTACACATGCAACTGCTGCTATGATGCATGATGATGGGAATTTCATCTTGATGAACTCTCTTTCAAACATCATCTGGCAAAGTTTTGATTCTCCAACAAACACTATTCTACCGGGCCAAACTTTGAATATGGGTCAGGCACTCTATTCCAATGCCAATGGAACACAAGACTACTCAACCGGGCAATACAAGTTGGAGATTCAACCTGATGGCAACATTATTCTCACTGCTTTTCGGTTCGAGGGTCCTTCATATTGGTACACTTCCACAAAAGATAACACAAGTGTGAGACTTATCTTCAACAACATAACAACATTTCTATATGCTGTCAATGGCACACACAACATATATAACATGACCACAGCCACGGAAGTGCCAAACCCAGTTGAAGATTACTATCATAGAGCAGTGATCAACTATCTTGGAAATTTTCAACAGCTGATTTACCTTAAAGAAAGTGGAAACCATGCGTGGAGAGTTATATGGGAGGCCATAACACAGCCTTGTACAGTAAATGCCATTTGTGGGGTCTATGGCCTTTGCACTTCACCTGACAACACTACAGTCAATTGCACATGTTTGCCTGGATACACACCCTTTGATCCAAGTGTTCCCTCTAAAGGGTGCTATCCCAGTGTGGCCATGGATTTGTGTTCTGCAAATTCCTCTGCATCAGACTATACAGTGGTAGAAATTCAAGATTCTGACATACCAAACGATGAATTCTTTGATCTGCAAAGATTAGATTCCTCTGATTTGGACAGTTGCAAGAAGGAAGTGATGGATGATTGTTTCTGTATGGCTGGTGTTCTGATTAACTCGGTTTGTTATAAGAAAAGGACACCTATTGCAACAGCCAGAATAAGCATTCCTGCAACTAGCAATAGTGTAGCACTGATTAAAGTTCCTCAGGCTCACAAAAACAATGAAAATGATGATTCACCTTCTCGAGTCAGTTTGCTAATAGCCCTCTCAGCATGCTCCTTACTTGCTATTGTGTTTGCAACTATTGCTATATATCATCACCCAACATTTCGCCATCTCATGCAGAAAGAGGCACCCCCAAAGCCAAAGCCTGTGGACATCAACCTAAAGGCATTTTCGTTCCAAGAGTTGAGAGAAGCAACAAACGGGTTCAGGAACATGCTTGGCCATGGAGCCTTTGGTTCGGTCTATATAATTGGTATGACTCATCATAAGAATCTTGTGAGGCTGTTGGGTTTCTGCAATGGGAAGAATCATCGTCTTCTTGTTTATGAGATGATGAGAAATGGGGCACTGTCCAATTTTCTTTTTAAGGACGAAGATAAACCCAGTTGGGAGCGTAGAGCCAAATTTGTTCTTGAAATTGCTAGAGGCTTGTTGTACCTGCATGAAGAGTGTGACCCCCAGATCATCCACTGTGACATAAAGCCACAAAATGTTCTTCTTGACTCAAATTACACTGCAAAAATTGCAGATTTTGGACTGGCAAAGTTACTAATGAAAGACGGGACTAAAACGAGCACAAGTGTAAGAGGGACAATGGGATATTTGGCACCAGAATGGCTCAAAAATGCACCTGTCACTGCAAAAGTGGATGTCTACAGTTTTGGCGTCATGTTGCTAGAAATCCTATTTTGCAGAAGGCACATTGAGTTGCATCAAATTGAAGATGGAAGTGAAGGTGGTGATGACATGATACTTATAGATTGGGTTCTGTATTGGGCTAAAGAAGGGAATTTAAGAGACATTGTGAGCCATGATGTTGAAGTTGTGAACGATTTTAACAGGTTCGAGAGAATGGCAATGGTTGGATTGTGGTGCCTTTGTCCTAACCCAACTCTAAGGCCATCTATTAGAAAAGTGATAAAGATGTTGGAAGGAAATTCAGAAGTTGGTGCTCCACAACTGTTTGATGAGCAAATGTTGTAA 4170 0.4221 MITSTFEKTAPMFAQCVVLAFFLRFSSINSLPHPLDPLSPSEINKTRDIVQGSYLGVIPNLTYHFVDVEEPDKKDVLKWLNSNTKDESIILRQAKVVVRAKGETHELVVDLTRGSIVSDKIYTGHGYPPLTFRELFQASKLPLKYPKFKESIAKRGLNLSAVSCVPFTIGWYGEQITRRALKVVCFYRGGSVNVWARPIEGITVLVDVDSMQIIMYNDRYRAPLPKAEGTDFQSSSSSRPKISASCNVSDIGFTIKDHVVKWANWVFHVGFNARAGMIISTASIFDAKKQKYRRVLYRGHVSETFVPYMDPTNEWYFRTFMDAGEFGFGRAADSLQLRLDCPGNAEYMDGYMAGPNGEVQQVPSAICIFERHSGNVAWRHMEINNPIKMIRNGEPEITLVVRMVATVGNYDYVLDWEFLRSGSIKVGVDLTGIMEMKAVPYTENGQIKESVFGTLVAENTIANYHDHYITYYLDLDIDDNSNSFINAKIQKKTATGFGTPRKSYWTVVREIAKREAEGRIRLGLEPADLLIVNPNRRTKLGNQVGYRLISAQPVTSLLSDDDFPQRRASYTKYQLWVTPYNKSERWAAGFYADRSRGDDGLAVWSQRNREIENTDIVLWHTIGIHHIPYQEDFPAMPAIHGGFELRPANFFESSPLGLRTVDTNNSIELGSSLVAGTNSSWRSLSGDFAFGFYPLGTGHYLVGIWFDKIPQKTLVWSANRDDPAQIGSSITLTLSGQFMLQHPNKASFPIYNGTHATAAMMHDDGNFILMNSLSNIIWQSFDSPTNTILPGQTLNMGQALYSNANGTQDYSTGQYKLEIQPDGNIILTAFRFEGPSYWYTSTKDNTSVRLIFNNITTFLYAVNGTHNIYNMTTATEVPNPVEDYYHRAVINYLGNFQQLIYLKESGNHAWRVIWEAITQPCTVNAICGVYGLCTSPDNTTVNCTCLPGYTPFDPSVPSKGCYPSVAMDLCSANSSASDYTVVEIQDSDIPNDEFFDLQRLDSSDLDSCKKEVMDDCFCMAGVLINSVCYKKRTPIATARISIPATSNSVALIKVPQAHKNNENDDSPSRVSLLIALSACSLLAIVFATIAIYHHPTFRHLMQKEAPPKPKPVDINLKAFSFQELREATNGFRNMLGHGAFGSVYIIGMTHHKNLVRLLGFCNGKNHRLLVYEMMRNGALSNFLFKDEDKPSWERRAKFVLEIARGLLYLHEECDPQIIHCDIKPQNVLLDSNYTAKIADFGLAKLLMKDGTKTSTSVRGTMGYLAPEWLKNAPVTAKVDVYSFGVMLLEILFCRRHIELHQIEDGSEGGDDMILIDWVLYWAKEGNLRDIVSHDVEVVNDFNRFERMAMVGLWCLCPNPTLRPSIRKVIKMLEGNSEVGAPQLFDEQML* 1390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g2322 1389 Pfam Copper amine oxidase, N3 domain 128 222 IPR015802 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Apr8g2322 1389 Gene3D Copper amine oxidase, catalytic domain 253 662 IPR036460 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Apr8g2322 1389 SUPERFAMILY Protein kinase-like (PK-like) 1111 1373 IPR011009 -
Apr8g2322 1389 SUPERFAMILY Amine oxidase catalytic domain 252 656 IPR036460 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Apr8g2322 1389 Gene3D - 130 221 - -
Apr8g2322 1389 Pfam Copper amine oxidase, N2 domain 33 121 IPR015800 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Apr8g2322 1389 ProSitePatterns Copper amine oxidase copper-binding site signature. 621 634 IPR000269 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Apr8g2322 1389 Gene3D - 784 923 - -
Apr8g2322 1389 ProSitePatterns Copper amine oxidase topaquinone signature. 399 412 IPR000269 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Apr8g2322 1389 Gene3D Phosphorylase Kinase; domain 1 1142 1174 - -
Apr8g2322 1389 Pfam Protein kinase domain 1143 1370 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g2322 1389 Pfam D-mannose binding lectin 713 797 IPR001480 -
Apr8g2322 1389 Pfam Copper amine oxidase, enzyme domain 252 655 IPR015798 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Apr8g2322 1389 Gene3D Transferase(Phosphotransferase) domain 1 1175 1382 - -
Apr8g2322 1389 SUPERFAMILY Amine oxidase N-terminal region 30 127 IPR016182 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Apr8g2322 1389 SUPERFAMILY Amine oxidase N-terminal region 126 232 IPR016182 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Apr8g2322 1389 ProSiteProfiles Protein kinase domain profile. 1086 1383 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g2322 1389 SUPERFAMILY alpha-D-mannose-specific plant lectins 700 842 IPR036426 -
Apr8g2322 1389 Gene3D - 663 783 IPR036426 -
Apr8g2322 1389 Pfam S-locus glycoprotein domain 882 951 IPR000858 GO:0048544
Apr8g2322 1389 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 663 1144 - -
Apr8g2322 1389 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 1143 1384 - -
Apr8g2322 1389 SMART blect_4 672 784 IPR001480 -
Apr8g2322 1389 Gene3D - 32 128 - -
Apr8g2322 1389 PANTHER SERINE/THREONINE-PROTEIN KINASE 1143 1384 - -
Apr8g2322 1389 PANTHER SERINE/THREONINE-PROTEIN KINASE 663 1144 - -
Apr8g2322 1389 SMART serkin_6 1129 1372 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g2322 1389 ProSiteProfiles Bulb-type lectin domain profile. 658 782 IPR001480 -
Apr8g2322 1389 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1217 1229 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g2322 Apr-Chr8 33617889 33626424 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g2322 1115 1375 Receptor kinase-like Gene Family AT1G60800 36.577 2.78e-57 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Apr8g2322 Cu_amine_oxid 1.8e-129 CL0103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g2322 K00276 - aprc:113871840 2807.32