Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g2319 ATGAATGGTGGTTCAGGTGTTGAGGTTGAGTACTGTGAGTTTGTGGAAGTTGATCCTACTGGAAGATATGGAAGATACAACGAAATTCTTGGCAAAGGAGCTTCCAAGACAGTCTATAGAGCATTTGATGAGTATCAAGGGATAGAAGTAGCATGGAATCAAGTAAAGCTTTACGACTTTTTGCAGAATCCAGAAGATCTTGAGAGGTTATGTAGTGAAATTCATCTCCTCAAGACACTGAAACACAAGAACATCATGAAGTTCTTTACTTCCTGGGTTGATACTGCCAACAGGCACATTAACTTCGTCACTGAGATGTTTACCTCTGGGACTCTAAGACAGTACAGGCTTAAACACAGAAGGGTTAACATCAGAGCTATTAAGCATTGGTGCAGGCAGATTTTGGAAGGGCTTCTCTATCTGCACAGCCATGATCCTCCTGTGATCCACAGAGATCTCAAGTGTGATAACATTTTCATCAATGGCAACCAAGGGGAAGTCAAAATTGGTGATCTTGGCCTTGCTGCAATTCTCCGCAAATCTAATGCTGCTCGTTGTGTTGGCACACCCGAGTTTATGGCGCCAGAAGTGTATGAAGAGGATTACAATGAATTGGTTGACATATACTCTTTTGGAATGTGCATCTTAGAGATGGTCACCTTTGAATATCCTTATAGTGAATGCAACCATCCAGCTCAAATTTACAAAAGAGTTGTCTCTGGGAAGAAGCCAGAAGCTCTTTACAAAGTAAGCAATCCTGAGGTTAGGCAATTTGTAGAGAAATGCTTAGCAACTGTGTCCCTCAGGCTTTCAGCTAAGGAACTCTTGGAGGACCCTTTTCTCCAAATTGATGATTATGGATCTGACTCAAAAGGAGTGCAGTATCAAAGAGATTTCTATGAAGAAGGTCGAGTTCGAAACATTTACTTCCCATTTGACATCGAGACCGATACTGCATTGAGCGTTGCAAAGGAAATGGTAGCTGAGCTTGACATAACTGACCAAGATGTAACAAAATTAGCAAACATGATAGATAATGAAATTGCAATATTGGTTCCAGAGTGGAAAACAGGACCCAGAATAGAGGAAATTTCAGAATGTTCAAGTGTCTGCCTCAACTGTGCTGCAAATGGTTCCTTGTTTGATTATGTATCATCAAATAATCCATGTGGCAAGAATCTTCAATTTCTTCATTGTTCCAAAAACGGATGTGCTGCAGTTCATGGCAGATTTGAAGAGATAACATACCAAGTTGAAGGGTCTAGAAATAGTGTTACAGAAGGCGCACCAGATGCATCAAGCCAATCCAATGGCATTATTCATTTTACCGATATCTGGGCTCAGCGAGATGAACCAGAATTATGTCATGAAGAGTTAAAAGATATACATTGTGATCAAGCTAATGAGGCTTCAAACAAATCAAACATCAAGGAGGATGCAAAAACTGTTAATGCGGATGAACCAAGTGATCTCAATGCCAAAAAGCCTCCTCCTATCCCTGCATCAAGGTGTGTTCTCTTGGACTATGAAAATGAAATTAGGCAAGAACTAAGATGGCTCAAAGCAAAGTACCAAATGCAGTTAAGGGAGCTTAGAGACCACCAACTAGGGAGTAAACCAAAATTAACTAGCATATCTCCTGACACTGATATATTAGAGCATGGGAAAGATGGAATTTTGAGGCTATCAGCTACATCCAACTTGAAGATACAAAACAACAAACCATCATTGAGATCTATTGCTTCTGGGAAGCATTTTCTGGTAGATATTGAGAAATGCAACACTCTGGATGATCAAATGATTCAAAATGGTGATGAGATTAGCCAGTCTAATAGTCCTGAGCAAATGGTTACAGCCAAGGATTTCTTTGCTGGAGCTTTGCTTCCACACTCTCTTCATAGGGCAACCTCACTTCCTGTTGATGCAATAGATGTCTAG 1938 0.4045 MNGGSGVEVEYCEFVEVDPTGRYGRYNEILGKGASKTVYRAFDEYQGIEVAWNQVKLYDFLQNPEDLERLCSEIHLLKTLKHKNIMKFFTSWVDTANRHINFVTEMFTSGTLRQYRLKHRRVNIRAIKHWCRQILEGLLYLHSHDPPVIHRDLKCDNIFINGNQGEVKIGDLGLAAILRKSNAARCVGTPEFMAPEVYEEDYNELVDIYSFGMCILEMVTFEYPYSECNHPAQIYKRVVSGKKPEALYKVSNPEVRQFVEKCLATVSLRLSAKELLEDPFLQIDDYGSDSKGVQYQRDFYEEGRVRNIYFPFDIETDTALSVAKEMVAELDITDQDVTKLANMIDNEIAILVPEWKTGPRIEEISECSSVCLNCAANGSLFDYVSSNNPCGKNLQFLHCSKNGCAAVHGRFEEITYQVEGSRNSVTEGAPDASSQSNGIIHFTDIWAQRDEPELCHEELKDIHCDQANEASNKSNIKEDAKTVNADEPSDLNAKKPPPIPASRCVLLDYENEIRQELRWLKAKYQMQLRELRDHQLGSKPKLTSISPDTDILEHGKDGILRLSATSNLKIQNNKPSLRSIASGKHFLVDIEKCNTLDDQMIQNGDEISQSNSPEQMVTAKDFFAGALLPHSLHRATSLPVDAIDV* 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g2319 645 ProSiteProfiles Protein kinase domain profile. 24 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g2319 645 CDD STKc_WNK 22 281 - -
Apr8g2319 645 Gene3D Transferase(Phosphotransferase) domain 1 107 286 - -
Apr8g2319 645 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK1-RELATED 301 634 - -
Apr8g2319 645 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK1-RELATED 1 292 - -
Apr8g2319 645 Gene3D Phosphorylase Kinase; domain 1 8 105 - -
Apr8g2319 645 SUPERFAMILY Protein kinase-like (PK-like) 27 282 IPR011009 -
Apr8g2319 645 Pfam Protein kinase domain 27 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g2319 645 SMART serkin_6 24 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g2319 645 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 1 292 - -
Apr8g2319 645 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 301 634 - -
Apr8g2319 645 Gene3D - 293 356 - -
Apr8g2319 645 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 307 348 IPR024678 GO:0004674|GO:0005524
Apr8g2319 645 ProSitePatterns Serine/Threonine protein kinases active-site signature. 148 160 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g2319 Apr-Chr8 33586932 33590654 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g2319 1 435 MAP Kinase Kinase Kinase AT3G22420 51.955 1.18e-170 498
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Apr8g2319 Pkinase 5.4e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g2319 K08867 - ming:122091797 745.347