Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g2309 ATGCCCAGCCTGTTCTCCAAACACCTTCACCTCTGTTTCTTCAAGCACAAATACCCCACCATCCTATGCCACTCACACTCTCCACCACCCTCACCACCATCCACCACCGATCACTACTTCTCTTCTTCCTCCTCCTCCTCCGACTCCACCGAACCCGACTTCGCCTCCATCTTCGCCTCCCAACGCTTCTTCTTCTCCTCCCCAGGCACCTCCAATTCCATCATCCAATCCCCCGACACTCGCACTTCCACCCCAACCGGTGGTGGCATTACGGTCCCCAAGTACTCCCTCAACCCCTACGTCGATTTCCTCCGTTCAATGCAGGAAATGATCCGTTCCCGCCAAATCTTTGACGTTAGAAAAGATTGGGACTATCTCCATGAACTCCTCTTATGCTACCTCGCTCTCAATCCCACACATACCCACAAATACATCGTTCGTGCTTTCACCGACCTTGTCGTCGAACTCTTGTCCTCCACCCCTCGCCGGACACGCAACAACCGGCGCCAGAGTAGTTTCTCAGGGAGCTTCGTGTAA 537 0.54 MPSLFSKHLHLCFFKHKYPTILCHSHSPPPSPPSTTDHYFSSSSSSSDSTEPDFASIFASQRFFFSSPGTSNSIIQSPDTRTSTPTGGGITVPKYSLNPYVDFLRSMQEMIRSRQIFDVRKDWDYLHELLLCYLALNPTHTHKYIVRAFTDLVVELLSSTPRRTRNNRRQSSFSGSFV* 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g2309 178 Pfam Transcriptional repressor, ovate 96 156 IPR006458 -
Apr8g2309 178 PANTHER TRANSCRIPTION REPRESSOR OFP12 27 168 - -
Apr8g2309 178 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 27 168 IPR038933 GO:0045892
Apr8g2309 178 ProSiteProfiles OVATE domain profile. 92 155 IPR006458 -
Apr8g2309 178 MobiDBLite consensus disorder prediction 26 45 - -
Apr8g2309 178 MobiDBLite consensus disorder prediction 70 89 - -
Apr8g2309 178 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 90 158 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g2309 Apr-Chr8 33522329 33522865 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Apr8g2309 Ovate 2e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g2309 - - gmx:102667886 247.669