Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g2290 ATGGCCTCTAATTCCCCCAAAAGAGAGGGCCCTTATCTCATTACACTATTCCGAGTCTCCCTCTTTGTCATTCTTATCTCCATCATCAACCCCTCACACCAATCTGAACACCCTTCCCCTCTGCCCCCACTAAACCCAAGGCTCTCCAAAGCCTACACAGCTCTCCAAGCATGGAAACACACATTCACTTCTGACCCCAAAAACCTCACCTCCAACTGGTGTGGCCCTAATGTTTGCAACTACACTGGCGTCTATTGTGCACCAGCCCCAGATGATCCTTACATCTACACAGTTGCTGGAATAGACCTAAACCATGCAAACATAGCTGGTTCATTACCGGAAGAACTTGGCCTCTTAACCGACCTTGCCCTTTTCCACATAAACTCCAACCGTTTTTGTGGTTACCTTCCCAATAGCTTTGACCAACTTCACCTTCTCTATGAGCTAGACATAAGCAACAACAAATTCTCAGGACCATTCCCTGAAGTTGTTCTTTGCCTCCCTTCACTAAAATTCTTGGATATCAGATTCAACAAGTTCGAAGGCAATGTTCCCTCGAGCCTCTTTGACCTTAAGCTCGACGCCCTTTTCATCAACAACAACAACTTTCAATTCTCTATACCTGAAAACTTCGGGAACAGTACTGTTTCTGTGGTTGTGTTTGCAAACAATGATCTAAAGGGTTGTCTTCCATCGAGTTTAGCCAAAATGAAGAATACCCTTAACGAGATAATCATCACGAATAGTGGATTAAAGGGTTGTTTGCCACCAGAGATAGGGTCTTTGGACAAACTGACAGTGTTTGATGTGAGCTTCAATGAGTTGGTTGGAGAGTTGCCTGAGTCCATGGGAGGAATGAAAAGTTTGGAGCAGCTAAATGTGGCGCATAACATGTTGTCTGGCACGGTTCCTGAGAGTATATGTATGTTGCCAAGGTTGGAGAATTTCACGTACTCGTATAACTACTTCTGTAGTGAATCACAAGTGTGTCTCAAGTTGAAAGATAAAGATGATACCAAGAATTGTATTCCTTATAGGCCTTTGCAAAGGTCACCTCAGGATTGTGCTGCTTTTTATGCACATCCTGTTGATTGTAATGCCTTTGGTTGTTCCTTTAGAACTGCACCGCCGCCTCCACCTCCGCCTCCTCCTCCACCACCACCACCTCCGCCTCCTCCTCCTCCACCACCACCTCCACCGCCACCACCTCCTCCACCGGCGGCTTACTACCACTATCCCTGA 1242 0.4614 MASNSPKREGPYLITLFRVSLFVILISIINPSHQSEHPSPLPPLNPRLSKAYTALQAWKHTFTSDPKNLTSNWCGPNVCNYTGVYCAPAPDDPYIYTVAGIDLNHANIAGSLPEELGLLTDLALFHINSNRFCGYLPNSFDQLHLLYELDISNNKFSGPFPEVVLCLPSLKFLDIRFNKFEGNVPSSLFDLKLDALFINNNNFQFSIPENFGNSTVSVVVFANNDLKGCLPSSLAKMKNTLNEIIITNSGLKGCLPPEIGSLDKLTVFDVSFNELVGELPESMGGMKSLEQLNVAHNMLSGTVPESICMLPRLENFTYSYNYFCSESQVCLKLKDKDDTKNCIPYRPLQRSPQDCAAFYAHPVDCNAFGCSFRTAPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPAAYYHYP* 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g2290 413 MobiDBLite consensus disorder prediction 376 413 - -
Apr8g2290 413 Pfam Leucine rich repeat N-terminal domain 52 86 IPR013210 -
Apr8g2290 413 Gene3D Ribonuclease Inhibitor 215 338 IPR032675 -
Apr8g2290 413 Gene3D Ribonuclease Inhibitor 49 214 IPR032675 -
Apr8g2290 413 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 23 383 - -
Apr8g2290 413 SUPERFAMILY L domain-like 51 328 - -
Apr8g2290 413 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 6 23 383 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g2290 Apr-Chr8 33303780 33305205 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g2290 37 370 Leucine-rich Repeat extension Gene Families AT3G22800 69.552 7.93e-167 474
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g2290 - - gmx:100818195 632.098