Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g2289 ATGGGGAAGACAGGAAAATGGCTTAGAAGCTTCTTGACAGGTAAGAAAGACAAGGAAAAGGAGAAGGAAAAATCGGCAACTAACTTGAGTTCTTCAAATGGAACAGAAAATCCAACCACTCCAATTTCCACAACCCCAAAGGAGAAAAAGAGGTGGAGTTTTAGAAGATCATCAGCCTCAGCCACACCACCAACAACTTCCAAGGAATTGAACTTTGCAGAATCAAATGTTACGGCTTCTTCACAACAGATAGTGCAAACTGCCACTGATATTGAGAATGAGCAAAGGAAGCATGAAATGGCTGTGGCTGCTGCCACAGCAGCAGCAGCTGATGCTGCAGTGGCAGCTGCACAGGCTGCAGCTGTTGTAATTCGCTTAACTTCTGCTTCCAATGAAACATCTAAGAGTATCGAAGAGGTTGCTGCCATTAAAATTCAATCTGTCTTTCGGTCTCACTTGGCAAGAAAAGCATTGTGTGCTCTTAGAGGATTAGTGAAGTTGCAGGCACTAGTAAGGGGTCATTTGGTGAGAAAACAGGCCAAGGCAACTCTGAGATGCATGCAGGCTTTGGTGACAGCACAAGCCAGAGCTCGTGCTCAGAGGATTCGAGAGTCAGAAGGAAAGCCTCATCAAAAACATTCAACGCAGAGAAATGCTACAGAAGATTACATGTTCAGGCATTTATATAATGAAATGGACAGAGGCTTGGAAGACAACGTCAAGATTGTTGAGATGGATGTTTGTTTATCAAAATGGAACTCAAGAAGCAGAAGCAGCAGTGTACATCATCATGGACATCACGAACAATTTGACCATAGATTTTCAACACATTATTCAACAAATGGTTCATACTCAAAGGAAGAAAACTACAAGGTATCGCCAGCTCCATCAGCTTTGACAGAGCTGAGTCCAAGAGCCTGCAGTGGCCATTTTGAGGACTGCTTCAGCACAGCACAAAGCAGCCCCCAGTACTACTCAGCTGTGTCAAGAGCAGATGATTCAAAACATCCTTTTGCATTCCCTGGGCCAGCTTATGCAGAATCCATGTCCTATGACTACCCTTTGTTCCCAAATTACATGGCTAACACTGAATCTTCAAGGGCTAAAGTCAGATCACACAGTGCACCAAAACAAAGACCAGCAGATTCATTTGAAAGACAACCAAGCCGGCGAAGAGTGTCAGTGGAAGGAAGAAATGTGCCAAGGCCAATGAGGATGCAGAGGTCATCTTCACATGTGGGTGCCACTGCCCATAACTACCAATACCCTTGGTCTATCAAGCTTGACAGATCCACTGTTTCACTCAAAGACAGCGAGTGTGGCTCTACAAGCACAGTGCTCACAAACACTAACTACTGCAGATCTCTCGTTGCATATGATCCACGTGGAGATAGGTATTGA 1401 0.4461 MGKTGKWLRSFLTGKKDKEKEKEKSATNLSSSNGTENPTTPISTTPKEKKRWSFRRSSASATPPTTSKELNFAESNVTASSQQIVQTATDIENEQRKHEMAVAAATAAAADAAVAAAQAAAVVIRLTSASNETSKSIEEVAAIKIQSVFRSHLARKALCALRGLVKLQALVRGHLVRKQAKATLRCMQALVTAQARARAQRIRESEGKPHQKHSTQRNATEDYMFRHLYNEMDRGLEDNVKIVEMDVCLSKWNSRSRSSSVHHHGHHEQFDHRFSTHYSTNGSYSKEENYKVSPAPSALTELSPRACSGHFEDCFSTAQSSPQYYSAVSRADDSKHPFAFPGPAYAESMSYDYPLFPNYMANTESSRAKVRSHSAPKQRPADSFERQPSRRRVSVEGRNVPRPMRMQRSSSHVGATAHNYQYPWSIKLDRSTVSLKDSECGSTSTVLTNTNYCRSLVAYDPRGDRY* 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g2289 466 MobiDBLite consensus disorder prediction 1 67 - -
Apr8g2289 466 Pfam Protein of unknown function (DUF4005) 337 397 IPR025064 -
Apr8g2289 466 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 443 - -
Apr8g2289 466 MobiDBLite consensus disorder prediction 27 47 - -
Apr8g2289 466 ProSiteProfiles IQ motif profile. 162 189 IPR000048 GO:0005515
Apr8g2289 466 Gene3D - 138 187 - -
Apr8g2289 466 MobiDBLite consensus disorder prediction 375 398 - -
Apr8g2289 466 Pfam IQ calmodulin-binding motif 141 158 IPR000048 GO:0005515
Apr8g2289 466 Pfam IQ calmodulin-binding motif 165 181 IPR000048 GO:0005515
Apr8g2289 466 ProSiteProfiles IQ motif profile. 138 166 IPR000048 GO:0005515
Apr8g2289 466 PANTHER IQ-DOMAIN 5-RELATED 1 443 - -
Apr8g2289 466 MobiDBLite consensus disorder prediction 10 26 - -
Apr8g2289 466 MobiDBLite consensus disorder prediction 367 398 - -
Apr8g2289 466 SMART iq_5 160 181 IPR000048 GO:0005515
Apr8g2289 466 SMART iq_5 137 159 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g2289 Apr-Chr8 33295125 33297164 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g2289 1 454 IQD Protein Family AT4G14750 44.958 6.52e-107 323
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g2289 - - gmx:100817667 718.383