Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g2271 ATGCAGCTCCTTCACTCCGACGAAACCGCGCCCCAACCCTCCGATAAACCCCAAGACCATAACACCTCTAGCGATTCGCTCGACCCCGGAATCGACGATTCCCTGGCTCTCGACGTCACCGGAAAGACCGTCGAGTTCCTGGCGGCTGAGAATGCCGAAGACTCCGTCGAGAGTTTGTACATGTATAAGAATATCTATAGCTTGATTCCCAAGTCCGTAGCTGGCCTCGTGCGGTTGCGAACGTTGAAGTTCTTCGGAAACGAGATTAACTTGTTCGCCCCCGAGTTTGGGAACTTGACGGCGTTGGAGTGCTTGCAGATGAAGATTTCTTCGCCTGGGATTGGTGGCTTGCACTTGCACGAGCTCAAGGGTTTGAAGGAGCTTGAACTTTCTAAGGGCCCTCCCAGACCTTCTGCTTTTCCCATTTTGACTGAGATTTCTGGTCTCAAGTGTTTGACCAAGCTTTCCATTTGCCATTTCTCTATACGATACCTTCCTCCGGAAATTGGATGCTTAAAGAACCTGGAGTATCTTGATCTTTCATTCAATAAAATGAAGACATTGCCTTCGGAGATTAGTTATTTGAATGGCTTAATATCCATGAAGGTTGCGAATAACAAGTTGGTGGAACTACCGTCGGCTATGTCCTCTCTGTCAAGGCTGGAGAGTTTGGACCTGTCAAATAATAGGTTGACTTCATTAGGATCCCTTGAACTTGCCTCCATGCATAGACTTCAGAACTTAAATCTTCAGTACAACAAGCTGCTTGGAATGTTTCAAGTTCCTTCATGGATATGCTGTAGTATGGAGGGAAATGATGGAGCTAGATGCAAAGATGACTGCGGCAGTTCTTCTGTTGAAATGGATGTCTATGAAAGTAGCTTTCAGGAAAATGGTGAAGCCGTTTCTCATGGCCCTCATAACACCTCATCAAGCATATTAACAAGCTCCTCATGTAGCAGTAGATGTTTTGCAGCTCGGAAGTCAGGTAAACGGTGGAAACGGCGACATTATTTACAGCAGAAAGCTCGTCAAGAACGTTTGAACAACAGTAGGAAGTGGAAAGGTGTAGATCATGACCAGTTATTGAGCAAGAGGGTTCACAGAATTTCAGAACCAGGAAATCTTGATGGTCTTGCTTCTGAAGGTTGTGCAAAATCTGTATCAGATAATGGGGGCCTTGATGATAGTCGGAAAAGAATATTTTCTGAACAAGCAGTAAATAATAATGTAATTGATAATGTTGACAATGATGAAGTAATTATTGAAAAGCACTTTTCTAGTGAAGATTGCTGCACTGCTGAATGCGAGGATGAAAAAGATTCATCCTTATGCACCTTAGAGAATGGACAAAGTGAACGAGATGAAACATCTTGTTCAGAATTTTTGCAGTGTATTTCCAAATCAAAGAGACATTCGGATCAGGATATTGATAATCCTAAACCATGCAAGTGTAGAAAATCACTTGGTGATAGCTCATTGTCTTGCAAGTTTAGCAAGATCTCATTGTGCGGTGTTGAGGACCATTTATCAGATGGCTTTTATGATGCAGGACGTGATCGGCCATTTATGCCCCTTGAGAGTTATGAGCAAAATCAGTGTCTTGCTTCTCGTGAAGTTATCCTTTTAGACAGAAAAAGGGATGAAGAGTTTGATGCTGTTATACTAGCTGCTCAGGCATTGGTCTATAATTTAAAGCAGTTATATGGTGTAAGCAGACCTGGGAACCAGGCTATGGTTGATAACTTGCAGATAGCTTCACTTCTTGCACTCTTTGTATCAGATCATTTCGGTGGCAGTGATAGAGGTGCTATTGTTGAGAGGACACGAAAATCTGTGTCTGGTTCAAACTATACTAAGCCTTTTGTCTGTACATGTTCGGCTGGAAGCAGCACGGGTATAAGTTCTTCCACCAAACCAAGTGTAAATGCTGTAGAAGATATCACTCTTTCTAGGATCTCTGAGAAATCTCTTGATTCTATCAAGAAAAGGCAAAATTCAATCATAGTTCCAATTGGTTCTGTGCAGTATGGTGTATGTAGACATAGAGCTCTGCTTTTTAAGTATTTATGTGATCACATGGAGCCGCCAGTACCTTGTGAGCTTGTGAGGGGCTACTTGGATTTTTCACCACATGCCTGGAATGTCATTCTGATTAAGAGGGGTAGTTCATGGGTTCGGATGCTGATTGATGCGTGTCGGCCTCATGATATAAGAGAAGAGAAAGATCCTGAATACTGTTGCAGGTATATACCTCTTAGTCGAACCAAAATCCCCCTTTCATCTGGAGGAAGTCCAGGTCCTGATTATTCCTTTCCATCTTTCTCTACTGGCGATGAACTCGAGAAAAAAGCTTCAACTACTTTAGTTAAATGCAAATTTGGATCCGTTGAGGCTGCAGCAAAGGTGCGTACTTTGGAAGTGCAGGGGAGTTCAGCTGACAAAATTAAAAATTTTGAATATAATTGTTTGGGAGAAGTTAGAATTCTTGGTGCTTTAAAACACCCCTGCATAGTCGAAATGTATGGACACCAAATATCGTGTCAATGGTCTATCTCAGCTGATGGTAATCCTGAGCATCATGTACTAAAATCTGCAATTTTTATGGAGTATGTGGAAGGGGGCTCGTTAAAAAACTATTTGGAGAAGCTGTCGGAAGCTGGAGAAAAGCATGTTCCTGTGGAGTTGGCTTTATATATTGCCAGAGATGTCTCATCTGCTTTGTCAGAGCTGCACTTGAAGCACATAATTCATCGTGACATAAAAAGTGAAAACATTCTGTTTGATTTGGTTAGGAAGAGAGACAATGGAGCTCCCACTGTGAAGCTCTGTGATTTTGATAGTGCAGTGCCACTAAGAGCAACTTTGCATGCGTGCTGTATTGGTCATTTGGGGACACCTCCTCCTTGTGTATGTGTTGGAACTCCTCGGTGGATGGCTCCAGAAGTTATGCGGACTATGTATGAAAAAAACACTTATGGTTTGGAAGCTGATATTTGGTCGTTTGGATGTTTACTTTTGGAGATGTTGTCTCTGCAAATTCCATATTCTGGAATGCCTGATTCCCATTTCCTTGATAGTCTGCAGATGGGCAAACGACCACGGTTAACTGAAGAGCTGGAGGTATTGAGTTCAATGAATGAACCCAGGATGATCCAATCCGGTGAAGAGCTGGAAAAATCAGATGCTGAGTTAGACACATTGAAATTTCTTGTTAATTTGTTTCATAGGTGTGTGGAAGACAATCCAAGCGAACGTCCTACAGCTGAAGAAATCCATAAAATGCTGCTTGCACACACTGGTCGCTTACAAGTTCAAGAGGTTAGGAAAATCTAG 3336 0.4251 MQLLHSDETAPQPSDKPQDHNTSSDSLDPGIDDSLALDVTGKTVEFLAAENAEDSVESLYMYKNIYSLIPKSVAGLVRLRTLKFFGNEINLFAPEFGNLTALECLQMKISSPGIGGLHLHELKGLKELELSKGPPRPSAFPILTEISGLKCLTKLSICHFSIRYLPPEIGCLKNLEYLDLSFNKMKTLPSEISYLNGLISMKVANNKLVELPSAMSSLSRLESLDLSNNRLTSLGSLELASMHRLQNLNLQYNKLLGMFQVPSWICCSMEGNDGARCKDDCGSSSVEMDVYESSFQENGEAVSHGPHNTSSSILTSSSCSSRCFAARKSGKRWKRRHYLQQKARQERLNNSRKWKGVDHDQLLSKRVHRISEPGNLDGLASEGCAKSVSDNGGLDDSRKRIFSEQAVNNNVIDNVDNDEVIIEKHFSSEDCCTAECEDEKDSSLCTLENGQSERDETSCSEFLQCISKSKRHSDQDIDNPKPCKCRKSLGDSSLSCKFSKISLCGVEDHLSDGFYDAGRDRPFMPLESYEQNQCLASREVILLDRKRDEEFDAVILAAQALVYNLKQLYGVSRPGNQAMVDNLQIASLLALFVSDHFGGSDRGAIVERTRKSVSGSNYTKPFVCTCSAGSSTGISSSTKPSVNAVEDITLSRISEKSLDSIKKRQNSIIVPIGSVQYGVCRHRALLFKYLCDHMEPPVPCELVRGYLDFSPHAWNVILIKRGSSWVRMLIDACRPHDIREEKDPEYCCRYIPLSRTKIPLSSGGSPGPDYSFPSFSTGDELEKKASTTLVKCKFGSVEAAAKVRTLEVQGSSADKIKNFEYNCLGEVRILGALKHPCIVEMYGHQISCQWSISADGNPEHHVLKSAIFMEYVEGGSLKNYLEKLSEAGEKHVPVELALYIARDVSSALSELHLKHIIHRDIKSENILFDLVRKRDNGAPTVKLCDFDSAVPLRATLHACCIGHLGTPPPCVCVGTPRWMAPEVMRTMYEKNTYGLEADIWSFGCLLLEMLSLQIPYSGMPDSHFLDSLQMGKRPRLTEELEVLSSMNEPRMIQSGEELEKSDAELDTLKFLVNLFHRCVEDNPSERPTAEEIHKMLLAHTGRLQVQEVRKI* 1112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g2271 1111 ProSiteProfiles Protein kinase domain profile. 783 1096 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g2271 1111 SUPERFAMILY Protein kinase-like (PK-like) 774 1096 IPR011009 -
Apr8g2271 1111 PANTHER BNAC08G43810D PROTEIN 57 1100 - -
Apr8g2271 1111 MobiDBLite consensus disorder prediction 1 30 - -
Apr8g2271 1111 Gene3D Ribonuclease Inhibitor 45 276 IPR032675 -
Apr8g2271 1111 SMART LRR_sd22_2 218 239 - -
Apr8g2271 1111 SMART LRR_sd22_2 172 197 - -
Apr8g2271 1111 Pfam Leucine rich repeat 200 255 IPR001611 GO:0005515
Apr8g2271 1111 SUPERFAMILY Cysteine proteinases 676 734 IPR038765 -
Apr8g2271 1111 ProSitePatterns Serine/Threonine protein kinases active-site signature. 916 928 IPR008271 GO:0004672|GO:0006468
Apr8g2271 1111 SMART serkin_6 775 1098 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g2271 1111 PANTHER SERINE/THREONINE-PROTEIN KINASE SBK1 57 1100 - -
Apr8g2271 1111 PRINTS Leucine-rich repeat signature 175 188 - -
Apr8g2271 1111 PRINTS Leucine-rich repeat signature 218 231 - -
Apr8g2271 1111 Gene3D Transferase(Phosphotransferase) domain 1 774 1110 - -
Apr8g2271 1111 ProSiteProfiles Leucine-rich repeat profile. 220 241 IPR001611 GO:0005515
Apr8g2271 1111 SMART LRR_bac_2 172 191 - -
Apr8g2271 1111 SMART LRR_bac_2 195 214 - -
Apr8g2271 1111 SMART LRR_bac_2 218 237 - -
Apr8g2271 1111 SMART LRR_typ_2 242 268 IPR003591 -
Apr8g2271 1111 SMART LRR_typ_2 218 241 IPR003591 -
Apr8g2271 1111 SMART LRR_typ_2 172 195 IPR003591 -
Apr8g2271 1111 SMART LRR_typ_2 76 98 IPR003591 -
Apr8g2271 1111 Pfam Ethylene-responsive protein kinase Le-CTR1 649 731 - -
Apr8g2271 1111 SUPERFAMILY L domain-like 56 262 - -
Apr8g2271 1111 Pfam Protein kinase domain 815 1094 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g2271 1111 ProSiteProfiles Leucine-rich repeat profile. 174 195 IPR001611 GO:0005515
Apr8g2271 1111 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g2271 Apr-Chr8 33150292 33159367 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g2271 800 1092 MAP Kinase Kinase Kinase AT4G08500 32.993 2.05e-22 101
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-2 Apr8g2271 Pkinase 3.4e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g2271 - - gmx:100819959 1826.22