Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g2270 ATGCCAGTGAGGCAGATGAAAGAGAGCTCAGAGCAACACCTTGTAATCAAGCCCCATTTGCAGAATCCTATGAATCCAGCTAAGAAAACAACCAAAACTGCACAAAACGGTAAAGGTCCACCGCCACAAGAAAATCATGGCCAAACTTCGCCTCACCCAAAGAACAAGGGAAGAAGAAGGGGACGAGGTGTCAGAAAATCGGATCAAGAAGTTTTGATGAGGCCTAGTTGCAGACCATGCACTGCAACACTAACAAGTAATGCAAATGGAAGTCTTGGAAAGGGTTGCATCTCTGCTGGCATGGATATGGGTTTTCCCACTTCAAGCAAGTCTTTGAGTTTTCCGCGTAGGCCTGGGTGTGGACAAGTTGGGACAAAATGCATTGTGAAGGCTAACCACTTCTTTGCAGAGTTACCAGACAAGGACTTGAACCAATATGATGTCACTATTACCCCAGAAGTGTCTTCTAGAACAGTAAACAGGTCCATTATAGCAGAACTTGTGAGGTTGTATAAAGAGTCTGACTTGGGGATGAGACTTCCAGCATATGATGGCAGAAAAAGTCTGTACACTGCAGGGCAGCTTCCCTTTGCTTGGAGAGAGTTTAAGATTAAGCTTGTGGATGAAGAGGATGGAGCTAATGGCCCCAAAAGGCAAAGAGAGTACAGGGTGGTGATCAAATTTGTTGCTCGGGCAAACTTGCATCACTTGGGCCAGTTTCTAGCTGGTAAGCGTGCTGATGCACCACAGGAGGCACTTCAAATTCTTGACATTGTATTAAGAGAGCTATCAACTAAGAGGTATTGCCCCATTGGGAGGTCCTTCTTTTCACCTGATATTAGAACACCACAACGGCTTGGAGAGGGATTGGAGTCTTGGTGTGGATTTTACCAGAGCATAAGACCTACTCAGATGGGCCTTTCCCTCAATATTGATATGGCATCTGCTGCTTTTATTGAGCCTCTTCCAGTAGTGGAATTTGTTGGCCAGCTATTAGGAAAAGATGTTCTGTCAAGGCCATTATCGGATGCTGATCGCATTAAGATTAAGAAAGCCCTTAGAGGAGTTAAAGTTGAAGTAACACACAGAGGAAGTGTGCGAAGAAAATATCGTGTTTCAGGGTTGACTTCTCAACCAACAAGAGAACTTGTGTTTCCTGTTGATGAGAACTCAACTATGAAATCGGTAGTTGAATACTTCCAAGAGATGTATGGTTTCACTATCCAACACACTCACCTTCCTTGCCTTCAAGTAGGAAACCAAAAGAAGGCTAACTATTTACCTATGGAGGCCTGCAAAATTGTTGAGGGGCAACGTTATACAAAAAGATTGAATGAGAAGCAAATTACTGCTCTATTGAAAGTAACATGCCAGAGACCTCGTGATCGGGAAAATGATATTTTACGGACCATTCAACATAGTGCTTATGATCAAGATCCATATGCAAAGGAATTTGGAATTAAAATCAGTGAAAAGCTAGCTTCTGTTGAAGCACGAATTCTTCCCGCCCCTTGGCTTAAATATCATGAAAGTGGGAAAGAAAAGAACTGTTTACCTCAAGTTGGTCAGTGGAATATGATGAACAAGAAAATGATTAATGGAATGACTGTTAGCCGGTGGGCATGCATAAATTTTTCAAGGAGTGTGCAAGACAGTGTTGCTCGCACTTTTTGCAATGAGCTTGCCCAAATGTGTCAAGTATCTGGGATGGAATTTAATCCAGAGTCTGTTATTCCTATCTACAATGCCAAGCCTGAGCAGGTGGAGAAAGCCTTGAAACATGTTTACCACGTGTCAGCGAACAAAACTAAAGGAAAGGAATTGGAGCTATTGTTAGCAATATTGCCAGACAATAATGGATCTCTCTATGGTGATATTAAGCGTATTTGTGAAACTGACCTTGGCTTAATTTCACAATGCTGTCTGACAAAGCATGTCTTTAAAATCACTAAACAGTACTTGGCTAATGTGTCTCTGAAGATCAATGTGAAGATGGGAGGTAGAAACACTGTACTTCTCGATGCTGTAAGTTGCAGAATACCATTGGTCAGTGATATACCAACCATAATTTTTGGAGCAGACGTAACCCACCCTGAAAATGGAGAAGATTCAAGCCCCTCAATAGCAGCTGTAGTAGCATCACAAGACTGGCCTGAAGTGACAAAATATGCTGGTTTAGTGTGCGCTCAAGCTCATAGACAGGAACTTATACAAGATTTGTACAAAACTTGGCATGATCCTATTCGTGGCACAGTTAGTGGTGGCATGATCCGAGATTTACTGGTTTCCTTTAGAAAGGCAACAGGACAAAAGCCACTACGAATTATATTTTACAGGGATGGTGTCAGTGAAGGGCAATTTTACCAAGTTTTACTTTATGAGTTGGATGCAATTCGGAAGGCATGTGCTTCCTTAGAACCAAACTACCAGCCTCCAGTAACTTTTATTGTTGTGCAAAAAAGACATCATACTCGGTTATTCGCAAACAACTACAGGGACAGAAGCAGTATGGATAGGAGTGGGAATATATTGCCTGGGACTGTTGTTGATTCTAAAATTTGTCATCCAACAGAATTTGATTTTTATCTTTGCAGTCATGCTGGCATCCAGGGTACTAGTCGGCCAGCTCATTATCATGTCTTATGGGATGAAAACAACTTCACAGCAGATGGAATTCAGTCTTTGACGAACAATCTTTGTTATACATATGCCAGATGTACAAGATCGGTATCTGTTGTTCCTCCAGCATATTATGCACATTTAGCAGCTTTTCGAGCCCGTTTCTATATGGAACCAGATATGCAAGAGAATGGCTCCGCCGGTGATGGCAATGTTCATACTTCCAAGGGAACTCGAGCAGCTGGAGAGTGTGCTGTCAAGCCATTGCCAGCCTTGAAAGAAAATGTGAAGAGAGTGATGTTCTACTGTTAG 2931 0.4231 MPVRQMKESSEQHLVIKPHLQNPMNPAKKTTKTAQNGKGPPPQENHGQTSPHPKNKGRRRGRGVRKSDQEVLMRPSCRPCTATLTSNANGSLGKGCISAGMDMGFPTSSKSLSFPRRPGCGQVGTKCIVKANHFFAELPDKDLNQYDVTITPEVSSRTVNRSIIAELVRLYKESDLGMRLPAYDGRKSLYTAGQLPFAWREFKIKLVDEEDGANGPKRQREYRVVIKFVARANLHHLGQFLAGKRADAPQEALQILDIVLRELSTKRYCPIGRSFFSPDIRTPQRLGEGLESWCGFYQSIRPTQMGLSLNIDMASAAFIEPLPVVEFVGQLLGKDVLSRPLSDADRIKIKKALRGVKVEVTHRGSVRRKYRVSGLTSQPTRELVFPVDENSTMKSVVEYFQEMYGFTIQHTHLPCLQVGNQKKANYLPMEACKIVEGQRYTKRLNEKQITALLKVTCQRPRDRENDILRTIQHSAYDQDPYAKEFGIKISEKLASVEARILPAPWLKYHESGKEKNCLPQVGQWNMMNKKMINGMTVSRWACINFSRSVQDSVARTFCNELAQMCQVSGMEFNPESVIPIYNAKPEQVEKALKHVYHVSANKTKGKELELLLAILPDNNGSLYGDIKRICETDLGLISQCCLTKHVFKITKQYLANVSLKINVKMGGRNTVLLDAVSCRIPLVSDIPTIIFGADVTHPENGEDSSPSIAAVVASQDWPEVTKYAGLVCAQAHRQELIQDLYKTWHDPIRGTVSGGMIRDLLVSFRKATGQKPLRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFIVVQKRHHTRLFANNYRDRSSMDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGIQSLTNNLCYTYARCTRSVSVVPPAYYAHLAAFRARFYMEPDMQENGSAGDGNVHTSKGTRAAGECAVKPLPALKENVKRVMFYC* 977
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g2270 976 MobiDBLite consensus disorder prediction 24 50 - -
Apr8g2270 976 SUPERFAMILY Ribonuclease H-like 602 932 IPR012337 -
Apr8g2270 976 Pfam Piwi domain 611 930 IPR003165 GO:0003676
Apr8g2270 976 ProSiteProfiles PAZ domain profile. 322 436 IPR003100 GO:0005515
Apr8g2270 976 Pfam N-terminal domain of argonaute 126 260 IPR032474 -
Apr8g2270 976 Pfam Mid domain of argonaute 519 596 IPR032473 -
Apr8g2270 976 Gene3D - 500 673 - -
Apr8g2270 976 SMART DUF1785_2 269 321 IPR014811 -
Apr8g2270 976 SUPERFAMILY PAZ domain 316 476 IPR036085 GO:0005515
Apr8g2270 976 PANTHER PROTEIN ARGONAUTE 10 57 975 - -
Apr8g2270 976 SMART Piwi_a_2 610 931 IPR003165 GO:0003676
Apr8g2270 976 Pfam PAZ domain 348 452 IPR003100 GO:0005515
Apr8g2270 976 SMART PAZ_2_a_3 326 458 IPR003100 GO:0005515
Apr8g2270 976 MobiDBLite consensus disorder prediction 1 73 - -
Apr8g2270 976 Gene3D - 679 976 IPR036397 GO:0003676
Apr8g2270 976 Pfam Argonaute linker 2 domain 462 508 IPR032472 -
Apr8g2270 976 CDD Piwi_ago-like 480 930 IPR045246 -
Apr8g2270 976 Pfam Argonaute linker 1 domain 270 319 IPR014811 -
Apr8g2270 976 Gene3D paz domain 315 440 - -
Apr8g2270 976 CDD PAZ_argonaute_like 321 435 - -
Apr8g2270 976 ProSiteProfiles Piwi domain profile. 610 931 IPR003165 GO:0003676
Apr8g2270 976 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 57 975 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g2270 Apr-Chr8 33128268 33135178 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g2270 1 976 Eukaryotic Initiation Factors Gene Family AT5G43810 82.000 0.0 1655
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g2270 K11593 - gmx:100816999 1871.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g0480 7 11158944 11161379 Apr8g2270 8 33128268 33135178 PCT