Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g2268 ATGGAGGGTACCAATTCCATGGCCTCCAAAAACGAAAGCGAGAATTCCACCGATACTACTCCATCATCGCCAAAGAACATATACAAAGATCCAGATGATGGGAGACAACGGTTTTTGCTTGAATTGGAGTTTGTTCAGTGCCTTGCTAATCCTACCTACATCCATTATCTGGCTCAGAATCGATATTTTGAGGATGAAGCATTCATTGGATACTTAAAGTATCTTCAATATTGGCAACGACCTGAATATATTAAATTTATTATGTATCCTCATTGCCTCTATTTTCTTGAACTGCTTCAGAATGCAAATTTTCGCAATGCAATGGCACATCCTAACAATAAGGAACTGGCGCATAGACAACAATTCTACTTCTGGAAGAACTATAGGAACAATCGGCTAAAACACATTTTACCAAGATCACTTCCTGAACCTAGTGCTGCTCCTGCACTTCCTGCTCCTGCTTCAACTCAAGTTGTGTCTGCACTACCACCAGTACCTGCTACAAGTGTTGCGGTGACAGCAACATCTACTCAAGTTCATTCTCCAATGTATGGTATGCCCCCTGGCTCTGCTCTTGCCAAAAATGAGATGAGGAATCCTGCCGTTGATAGAAGGAAGAGAAAGTGA 627 0.4179 MEGTNSMASKNESENSTDTTPSSPKNIYKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYFEDEAFIGYLKYLQYWQRPEYIKFIMYPHCLYFLELLQNANFRNAMAHPNNKELAHRQQFYFWKNYRNNRLKHILPRSLPEPSAAPALPAPASTQVVSALPPVPATSVAVTATSTQVHSPMYGMPPGSALAKNEMRNPAVDRRKRK* 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g2268 208 Pfam SOH1 36 128 IPR008831 GO:0003712|GO:0006355|GO:0016592
Apr8g2268 208 MobiDBLite consensus disorder prediction 1 26 - -
Apr8g2268 208 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 31 8 208 IPR008831 GO:0003712|GO:0006355|GO:0016592
Apr8g2268 208 MobiDBLite consensus disorder prediction 183 208 - -
Apr8g2268 208 Gene3D Mediator of RNA polymerase II, submodule Med31 (Soh1) 23 125 IPR038089 -
Apr8g2268 208 MobiDBLite consensus disorder prediction 1 29 - -
Apr8g2268 208 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 31 8 208 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SOH1 Apr8g2268 Med31 1.3e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g2268 K15153 - gmx:100527879 327.02