Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g2266 ATGGAAGATGATGGCTTGGTGCTGTTGTTCTATGCTAATGCAGCTAACCATCGCAGCAAGTTCAGCTCTATCATGGTTCCTCTTCTGCTCCTGCTTTTCCTCCTCTCTCCACTTGCCTCGCCATTCAGTGAAGAAGGACAAGCATTAATGGTGATGAAGGCTTCCTTCATCAATATGGCGGACGTACTCCTTGACTGGGATGACGTGCACAATGACGACTTTTGCTCTTGGCGTGGAGTTTTCTGTGATAATGTCAGCCTTACCGTGGTATCTCTGAATCTGTCCAGCTTGAACCTTGGTGGGGAAATATCGCCGGCCATTGGTGACTTGGGAAACTTGCAATCTATAGACTTGCAGGGGAACAAGCTAACTGGTCAAATCCCAGATGAAATTGGAAACTGTGCAGCACTTGTTCATCTGGATTTGTCTGACAATCAGCTATATGGGGATATATCTTTTTCCATATCAAAGTTAAAGCAACTCGAGTTTTTGAATTTAAAGAGTAATCAATTGACTGGTCCAATTCCTTCAACTTTAACCCAAATTCCAAACCTGAAGACTCTGGATCTTGCTAGAAATAAGCTCACTGGGGAGATACCAAGGCTTCTCTATTGGAATGAAGTCTTGCAGTATCTTGGGTTGCGAGGGAACTTGTTGACTGGAACTTTGTCCCCTGATATCTGTCAATTAACTGGTTTGTGGTATTTTGATGTGAGGGGCAATAATCTGACTGGTACTATACCTGACAGCATTGGGAACTGTTCAAGTTTTGAAATCTTGGACATATCATATAATCAGATTTCTGGGGAGATTCCCTACAATATTGGATTTCTGCAAGTGGCTACTTTGTCACTTCAAGGAAATAGGTTAACTGGGAAGATTCCAGAAGTCATTGGTTTAATGCAAGCCCTTGCAATATTGGATCTGAGCGAAAACGAATTAGAGGGATCAATTCCTCCAATACTTGGCAATCTGACTTTTACTGGCAAACTGTACCTTCATGGAAACAAGCTTTCTGGTGCCATTCCTCCAGAACTTGGCAATATGTCCAAGCTTAGCTATTTGCAATTGAATGACAATCAATTAGTGGGTAAAATTCCAGATGAAATAGGGAAGCTTGAACATCTTTTTGAATTGAACCTGGCAAATAATCTTCTTGATGGATCAATTCCGCATAACATCAGCTCCTGCACTGCCTTAAATCAGTTTAATGTGCATGGTAATCGTTTAAGTGGATCCATTCCATTGAGTTTCCGCAGCCTGGAGAGTTTGACGTACTTAAATCTATCTACAAACAATTTTAAGGGGAACATTCCAGTTGAGTTGGGGCATATCATTAATCTTGATACACTGGATTTGTCAAGCAATAATTTTTCAGGGCATGTACCAGCATCTGTTGGTTATCTTGAGCATCTCCTGACCCTAAACTTGAGTTATAATCACCTTGATGGGCCCTTACCTGCCCAATTTGGGAATCTCAGAAGCATTCAATTAATTGATTTGTCATTCAACAACTTGTCTGGTAGCATACCTTCAGAAATTGGACAGCTGCAGAATCTTGTTTCTCTGATTATGAACAGCAATGATTTGCAGGGGAAGATTCCTGATCAGCTGACTAACTGTTTCAGTCTTACTTCCGTAAACTTTTCGTATAATAATCTTTCTGGTGCAATTCCTTCAATGAGGAACTTCTCTCGGTTTTCAGCTGACAGCTTCATCGGAAATCCTTTATTATGTGGAAACTGGGTAGGATCAATTTGTCGTCCTTACGTACCAAAATCAAGAGAGATATTCTCAAGAGTTGCTGTTGTATGTCTCACACTGGGTATCATGATGTTGTTGGCAATGGTAATTGTTGCTTTCTATAAATCCAGCCAATCGAAGCAACTGGTTAAAGGATCTAGCCTAACTGGGCAAGGGCCTCCTAAACTTGTTATTCTTCATATGGATATGGCTATCCACACCTTGGATGATATAATGAGAAGTACTGAGAATCTCAATGAAAAATATATCATAGGGTATGGTGCCTCTAGTACTGTATACAAATGTGTTTTGAAGAGTTCACGACCTATTGCAATTAAGCGATTGTACAACCAGCATCCGCACAATTTAAGGGAATTCGAGACTGAACTTGAAACAATTGGCAGCATTAGACACAGAAACCTTGTCACCTTGCATGGATATGCCCTCACTCCCTATGGAAACCTCCTTTTCTATGATTATATGGCAAATGGCTCACTCTGGGATCTTCTTCATGGTCCCTTGAAGGTAAAACTTGATTGGGAAACACGCTTGAGGATTGCTGTAGGAGCAGCTGAGGGACTTGCTTATCTCCATCATGACTGCAATCCTCGAATTGTTCACAGGGACATAAAGTCTTCAAATATCCTGTTGGATGAGAACTTTGAGGCTCATCTCTCTGATTTTGGCACTGCAAAGTGTATCTCAACCACAAGAACTCATGCATCAACTTATGTTCTTGGAACTATAGGCTATATTGACCCAGAGTATGCTCGAACATCTAGGCTGAATGAAAAATCAGATGTATATAGCTTCGGCATTGTTCTACTAGAGCTACTTACAGGGAAGAGGGCAGTGGACAACGAGTCTAATTTGCATCAATTGATATTGTCAAAGGCAGATAACAACACTGTAATGGAGACTGTGGATCCAGAGGTCTCCATTACATGCATTGATCTGGCTCATGTGAAGAAGACCTTTCAGCTTGCTTTGCTTTGCACGAAAAGGAACCCTTCTGAGAGGCCTTCCATGCATGAAGTAGCCAGGGTGCTGGTATCACTACTTCCTGCACCTCCGAGTAAAATCCTTGCTCCCCCTGCAAAGAACTTTGACTATACTCATTTTGTGATTGAGAAGGGACAACAAAAATTGGAAGCGCAACAACCTCAGCAAGATAACAATTCATCCAATGCTCAATGGTTTGTTCGTTTTGGAGATGTTATATCCAAGAGCACTTGA 2979 0.4139 MEDDGLVLLFYANAANHRSKFSSIMVPLLLLLFLLSPLASPFSEEGQALMVMKASFINMADVLLDWDDVHNDDFCSWRGVFCDNVSLTVVSLNLSSLNLGGEISPAIGDLGNLQSIDLQGNKLTGQIPDEIGNCAALVHLDLSDNQLYGDISFSISKLKQLEFLNLKSNQLTGPIPSTLTQIPNLKTLDLARNKLTGEIPRLLYWNEVLQYLGLRGNLLTGTLSPDICQLTGLWYFDVRGNNLTGTIPDSIGNCSSFEILDISYNQISGEIPYNIGFLQVATLSLQGNRLTGKIPEVIGLMQALAILDLSENELEGSIPPILGNLTFTGKLYLHGNKLSGAIPPELGNMSKLSYLQLNDNQLVGKIPDEIGKLEHLFELNLANNLLDGSIPHNISSCTALNQFNVHGNRLSGSIPLSFRSLESLTYLNLSTNNFKGNIPVELGHIINLDTLDLSSNNFSGHVPASVGYLEHLLTLNLSYNHLDGPLPAQFGNLRSIQLIDLSFNNLSGSIPSEIGQLQNLVSLIMNSNDLQGKIPDQLTNCFSLTSVNFSYNNLSGAIPSMRNFSRFSADSFIGNPLLCGNWVGSICRPYVPKSREIFSRVAVVCLTLGIMMLLAMVIVAFYKSSQSKQLVKGSSLTGQGPPKLVILHMDMAIHTLDDIMRSTENLNEKYIIGYGASSTVYKCVLKSSRPIAIKRLYNQHPHNLREFETELETIGSIRHRNLVTLHGYALTPYGNLLFYDYMANGSLWDLLHGPLKVKLDWETRLRIAVGAAEGLAYLHHDCNPRIVHRDIKSSNILLDENFEAHLSDFGTAKCISTTRTHASTYVLGTIGYIDPEYARTSRLNEKSDVYSFGIVLLELLTGKRAVDNESNLHQLILSKADNNTVMETVDPEVSITCIDLAHVKKTFQLALLCTKRNPSERPSMHEVARVLVSLLPAPPSKILAPPAKNFDYTHFVIEKGQQKLEAQQPQQDNNSSNAQWFVRFGDVISKST* 993
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g2266 992 ProSiteProfiles Protein kinase domain profile. 666 935 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g2266 992 Gene3D Ribonuclease Inhibitor 324 589 IPR032675 -
Apr8g2266 992 Gene3D Ribonuclease Inhibitor 42 205 IPR032675 -
Apr8g2266 992 Gene3D Ribonuclease Inhibitor 206 279 IPR032675 -
Apr8g2266 992 Pfam Protein kinase domain 668 928 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g2266 992 ProSiteProfiles Leucine-rich repeat profile. 184 206 IPR001611 GO:0005515
Apr8g2266 992 SUPERFAMILY Protein kinase-like (PK-like) 645 931 IPR011009 -
Apr8g2266 992 Pfam Leucine Rich Repeat 112 134 IPR001611 GO:0005515
Apr8g2266 992 Pfam Leucine Rich repeat 254 270 IPR001611 GO:0005515
Apr8g2266 992 Gene3D Transferase(Phosphotransferase) domain 1 742 938 - -
Apr8g2266 992 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 33 972 - -
Apr8g2266 992 Gene3D Phosphorylase Kinase; domain 1 635 741 - -
Apr8g2266 992 SUPERFAMILY L domain-like 323 580 - -
Apr8g2266 992 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE ERL1-RELATED 33 972 - -
Apr8g2266 992 ProSitePatterns Serine/Threonine protein kinases active-site signature. 786 798 IPR008271 GO:0004672|GO:0006468
Apr8g2266 992 Pfam Leucine rich repeat 447 506 IPR001611 GO:0005515
Apr8g2266 992 Pfam Leucine rich repeat 160 219 IPR001611 GO:0005515
Apr8g2266 992 Gene3D Ribonuclease Inhibitor 280 323 IPR032675 -
Apr8g2266 992 ProSitePatterns Protein kinases ATP-binding region signature. 672 694 IPR017441 GO:0005524
Apr8g2266 992 SMART LRR_typ_2 301 325 IPR003591 -
Apr8g2266 992 SMART LRR_typ_2 421 445 IPR003591 -
Apr8g2266 992 SMART LRR_typ_2 373 397 IPR003591 -
Apr8g2266 992 SMART LRR_typ_2 110 134 IPR003591 -
Apr8g2266 992 SMART LRR_typ_2 158 181 IPR003591 -
Apr8g2266 992 SMART LRR_typ_2 469 492 IPR003591 -
Apr8g2266 992 SMART LRR_typ_2 493 517 IPR003591 -
Apr8g2266 992 SMART LRR_typ_2 349 372 IPR003591 -
Apr8g2266 992 SMART LRR_typ_2 230 254 IPR003591 -
Apr8g2266 992 SMART LRR_typ_2 182 206 IPR003591 -
Apr8g2266 992 SMART serkin_6 666 932 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g2266 992 SUPERFAMILY L domain-like 47 326 - -
Apr8g2266 992 Pfam Leucine rich repeat N-terminal domain 44 83 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g2266 Apr-Chr8 33089724 33099550 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g2266 112 992 Receptor kinase-like Gene Family AT5G07180 76.871 0.0 1372
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIb Apr8g2266 Pkinase 1.5e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g2266 K20718 - gmx:100811653 1753.03