Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g2258 ATGCCATCTCGACAACTGTCCACGTCGGCACCAGCTCCGAACCACCACCGCCACAACCACCACGTCTTAACCCCTCTCCTCGCTTCCACCGCCTCCGTCTGCTCTTTAATCCTTTTACTTCTCCTCTGCCTTCGGAAGCGCAAACGCACCACTCCATCCTCCGACTCCGATTCAAACCCTCCTCACCCCTACTCCTACGCGCTCCTCCGACGCGCCACCAGCTCCTTCTCCACGCGCCTCGGCCATGGCGGCTTCGGCCCCGTCTTCTCCGGCTCTCTCTCCGGAAAACCCGTCGCCGTGAAGCTCATGGACTCTGCTTCCCTCCAAGGCGAGCGCGAGTTCCACAACGAGCTCTTCTTCGCCTCCAGGCTCCGCTCTCCCCTCGTTGTCCCCGCCATCGGCTTCTCCTCCGACCCCAAACGCCGGCGTTTCCTCCTCGTTTACCACCTCATGCACAACGGCAACCTCCACGACGCCCTTCTCCGCCGCAAGACCCCCCACCTCGCGCTATGGAAAAACCGTTTCTCCATCATCCTCGACATCGCCAGAGGAATCCAATACCTCCACTCGTGCGACCCACCCGTCATTCACGGCGACATTAAACCCAGTAACATTCTTCTCGACGATTGCTTCAACGCCAGGATCGGCGATTTCGGCCTTGCCAGGCTGAAAACCGAGCCCCAGTTGGAAGTAGAAGTGGAAATCGACGGGAAGAGAAAGAAGGAGGAGTTGGAGAGCGACGGCGGGTCGGAATTGGAAACTCAGAGCGTGAACACGGAGCAATCGTTTGAAGGCGAGACGCAGAAGAAGAATGGGAAAGGGCTAAGCAGCAACAATGAGGTTGTTGGAGTTGCAGGGTGGGGTTCGGATTACGTGATGGATTGGATTGGGAAGGAGGTGAAGAAGGAAAGGGCGAAGGAGGAGTGGGTGGGTTCTGCGTCGGGTAGTGGAACGGTAGAGAAGAAGAAGAGTAGGAAGAAGTTGGAATGGTGGGAATCGATGGATGAGGAAAAGGGCGTTGCTGGTTGCGGAGTTTTGAATTTGAAGAAGGATAAGAGAAGGGGCGCGAGAGAGTGGTGGAAGGAGGAGTATTCTGAAGAGCTTGCAAGGAAGAAAAAGAAAAAGAAAAAGAAACAAAGCGACAACGATGACTGGTGGGAGACAGATGATGGTTTTAACAAGGATGTAAATGTAACAAACAAGGGTAAGAAAAAGCGTATTAGAAAGAGTAGTGGTAGTGTAGATTCGTGGTTTAGTGGGGAGCTGCGTAGAGCTAGATGGAATAGTTATGATTCAAACAGCGGAGAAATAGGGAAGAGTGGAGGTGTAAGCAGTACTCAAAGCATGAGGGGAACGGTTTTTTATGTTGCTCCTGAGTATGGATATGACGGAGATGTGTCAGAGAAGTGTGACGTGTACAGTTTCGGGGTTTTATTGCTTGTTATCGTTTCTGGGAGGCGCCCACTTCAGGTGACTGCTTCACCATTATCAGAGTTTCAACGTGCAAATCTGGTGTCTTGGGCTCGTGAATGTGGGCGCAGAGGGAAGCTCCTTGAAGTGGTTGATGAGTCCATTGAGTGGTTGAATAAAGAGGAGGCTCTTCTCTGCATGACGGTTGCGCTTCTTTGTTTGCTAAAGTCACCCGCTCGTCGTCCTTCCATGAAAGAGGTTGTGGGAATGCTCAGCGGGGACTTGGAGGCGCCCCAATTGCCGGTTGAATACTCACACTCACAAGAATCTCACTTGCCGTTCAAGTCTCGGAAAGGAGGCCGCTGA 1776 0.5315 MPSRQLSTSAPAPNHHRHNHHVLTPLLASTASVCSLILLLLLCLRKRKRTTPSSDSDSNPPHPYSYALLRRATSSFSTRLGHGGFGPVFSGSLSGKPVAVKLMDSASLQGEREFHNELFFASRLRSPLVVPAIGFSSDPKRRRFLLVYHLMHNGNLHDALLRRKTPHLALWKNRFSIILDIARGIQYLHSCDPPVIHGDIKPSNILLDDCFNARIGDFGLARLKTEPQLEVEVEIDGKRKKEELESDGGSELETQSVNTEQSFEGETQKKNGKGLSSNNEVVGVAGWGSDYVMDWIGKEVKKERAKEEWVGSASGSGTVEKKKSRKKLEWWESMDEEKGVAGCGVLNLKKDKRRGAREWWKEEYSEELARKKKKKKKKQSDNDDWWETDDGFNKDVNVTNKGKKKRIRKSSGSVDSWFSGELRRARWNSYDSNSGEIGKSGGVSSTQSMRGTVFYVAPEYGYDGDVSEKCDVYSFGVLLLVIVSGRRPLQVTASPLSEFQRANLVSWARECGRRGKLLEVVDESIEWLNKEEALLCMTVALLCLLKSPARRPSMKEVVGMLSGDLEAPQLPVEYSHSQESHLPFKSRKGGR* 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g2258 591 Gene3D Transferase(Phosphotransferase) domain 1 425 576 - -
Apr8g2258 591 Pfam Protein tyrosine and serine/threonine kinase 76 226 IPR001245 GO:0004672|GO:0006468
Apr8g2258 591 Pfam Protein tyrosine and serine/threonine kinase 444 558 IPR001245 GO:0004672|GO:0006468
Apr8g2258 591 MobiDBLite consensus disorder prediction 240 279 - -
Apr8g2258 591 Coils Coil 361 381 - -
Apr8g2258 591 PANTHER RECEPTOR-LIKE SERINE/THREONINE-KINASE PLANT 1 589 - -
Apr8g2258 591 PANTHER OS07G0586332 PROTEIN 1 589 IPR044576 -
Apr8g2258 591 SMART serkin_6 74 561 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g2258 591 ProSitePatterns Serine/Threonine protein kinases active-site signature. 195 207 IPR008271 GO:0004672|GO:0006468
Apr8g2258 591 SUPERFAMILY Protein kinase-like (PK-like) 58 574 IPR011009 -
Apr8g2258 591 Gene3D Transferase(Phosphotransferase) domain 1 61 241 - -
Apr8g2258 591 MobiDBLite consensus disorder prediction 250 278 - -
Apr8g2258 591 ProSiteProfiles Protein kinase domain profile. 74 570 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g2258 Apr-Chr8 33016640 33018697 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g2258 439 561 Receptor kinase-like Gene Family AT3G58690 35.659 2.41e-13 70.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XI Apr8g2258 PK_Tyr_Ser-Thr 1.6e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g2258 - - aprc:113872924 1136.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g0784 6 12228456 12230935 Apr8g2258 8 33016640 33018697 PCT