Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g2257 ATGTTTCCTTTACAACGCGGCAATGAGCTGGTTATCCAGTTTTCTAATGGTCTCCACCAGCAACACAAAATCTCACAAGATCTGATTCTCGATCATCATGATAATTCTCACTTTCTCAGTTATTCCGATCAAAAATCGCGTACTAGCTTCCCAAAGAAATCATCTTACGATGGGGCTGATACCAGTCACGCTAATTCCAACGAACATACAAAAAAGATGGTTCACAGAGAGATTGAGAGACAAAGGAGGCAAGAAATGGCTACCCTTCATGCCTCTCTTAGATCCCTTCTCCCTCTTGAGTTCATCAAGGGAACGCGTTCGTTATCTGATCAAATGAATCAGGCAGTGAATTACATACACCACTTGCAAAAGAATATCAAAGAACTGAGTTACAAGAGGGATGAACTAAAGAACAAAGTCTCCATTGATCCCAACCAACCCGAAAGCCATGAGACCAAGCATGAATCTTGTAGTTTCACTGTCCATCACAATAATGGAGCTGTGGGAATTGAAATCGCTAGTGGCTTCAAAGAGGAAGGCCCCCAACTTTCAAATTTGCTGGAACTTCTGTTAGAAGAAGGACTTGAAGTTGTTGGTTGTCTCTCAACCCAAGTCAATGGCAGGTTACTCCACAGTGTGCAGTGTGAGGTTAACAATTCCGACAGTGTAGACCTTTCTGAGCTGAGAAGGAAATTTTCCATTGTAATTCCGTCATTTAGATGTTCTGATTAA 732 0.418 MFPLQRGNELVIQFSNGLHQQHKISQDLILDHHDNSHFLSYSDQKSRTSFPKKSSYDGADTSHANSNEHTKKMVHREIERQRRQEMATLHASLRSLLPLEFIKGTRSLSDQMNQAVNYIHHLQKNIKELSYKRDELKNKVSIDPNQPESHETKHESCSFTVHHNNGAVGIEIASGFKEEGPQLSNLLELLLEEGLEVVGCLSTQVNGRLLHSVQCEVNNSDSVDLSELRRKFSIVIPSFRCSD* 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g2257 243 MobiDBLite consensus disorder prediction 40 72 - -
Apr8g2257 243 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 1 241 - -
Apr8g2257 243 Pfam Helix-loop-helix DNA-binding domain 71 123 IPR011598 GO:0046983
Apr8g2257 243 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 1 241 IPR015660 GO:0003700|GO:0006357
Apr8g2257 243 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 67 141 IPR036638 GO:0046983
Apr8g2257 243 CDD bHLH_AtORG2_like 71 137 - -
Apr8g2257 243 MobiDBLite consensus disorder prediction 41 63 - -
Apr8g2257 243 Coils Coil 119 139 - -
Apr8g2257 243 Gene3D - 61 152 IPR036638 GO:0046983
Apr8g2257 243 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 70 122 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g2257 Apr-Chr8 33010771 33011802 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g2257 30 232 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G25410 39.906 1.40e-38 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Apr8g2257 HLH 5.7e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g2257 - - gmx:100775836 328.176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g0783 6 12221523 12222848 Apr8g2257 8 33010771 33011802 PCT