Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g2253 ATGGCACTGCACGGAGTACTTACGGCACTCTCCTTGTATCTCATATATGCATCCACAAGCGTTCACTCAGCTATGGACCCGTACAAGGCACTGGGAATCATCCTCAACCCAAACGGCACGCTCACACGTTTAAACAAACCCCCACAGAGCCCTCCCTCACCGGATCCCACCCTCTCCACACCCGTTCTCTCCAAAGACCTAACCGTCAACCAATCAAAAAACACATGGGTTCGGATCTACCTTCCCCACAAAGCACTGGATAATCCCCCCTACTCCAACTCCAAACTACCACTCATTGTCTTCTACCACGGTGGTGGCTTTATATTCGACAGCGCCGCTTCCACTTACTTCCACAATTTCTGCGTCAATGTCGTCAACCAAACCCAATCCCTCGTCGTTTCAGTCGACTACCGCCTCGCCCCCGAGCACCGTCTTCCTGCGGCCTTTGAAGACTCCGTGGAGGCGCTGCACTGGATCAAAACCTCCAACGATCCGTGGTTGACGCGCCACGCTGATTACTCCCGCTGTTATCTTATGGGAGAGAGTGCCGGGGGTAATATTGCCTACAACGTGGGTCTACGTGCAGCCGCGAAGCTTTATCAAATCGAGCCGCTAAAGATACAAGGGCTGATATTGATTCAACCCTTTTTTGGTGGGACGAAGAGGACCCCATCAGAGATGAGGCTCGCTGAGGATGGGACTTTGCCTTTGGCAATTACTGATTTGCTGTGGAATCTGTCGTTGCCCAGAGGCGCTAACCGTGATTACAAGTATTCCAATCCAATGGCGAAGGGCGGAGCTAAGGTATTGAATCGGATTAGGGTGCTTGGGTGGAGCGTTGAGGTGTTTGGGTGCGAAGGGGACCCACTCGTGGACCGCGAGAAAGAGTTGGTGGAATTGCTCCACCGCAAGGGTGTGTCTGTTGAGGGAAAATTTTATGAAGGTGGTCGCCATGGGATTTTTGTGGGTGACCCTTCCATGTCCCAGAAAGTCTATGATTTTATTAGAAGTCTTCATTGA 1020 0.5176 MALHGVLTALSLYLIYASTSVHSAMDPYKALGIILNPNGTLTRLNKPPQSPPSPDPTLSTPVLSKDLTVNQSKNTWVRIYLPHKALDNPPYSNSKLPLIVFYHGGGFIFDSAASTYFHNFCVNVVNQTQSLVVSVDYRLAPEHRLPAAFEDSVEALHWIKTSNDPWLTRHADYSRCYLMGESAGGNIAYNVGLRAAAKLYQIEPLKIQGLILIQPFFGGTKRTPSEMRLAEDGTLPLAITDLLWNLSLPRGANRDYKYSNPMAKGGAKVLNRIRVLGWSVEVFGCEGDPLVDREKELVELLHRKGVSVEGKFYEGGRHGIFVGDPSMSQKVYDFIRSLH* 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g2253 339 Gene3D alpha/beta hydrolase 28 338 IPR029058 -
Apr8g2253 339 Pfam alpha/beta hydrolase fold 99 321 IPR013094 GO:0016787
Apr8g2253 339 PANTHER RECEPTOR GID1, PUTATIVE-RELATED 28 337 - -
Apr8g2253 339 PANTHER ARYLACETAMIDE DEACETYLASE 28 337 - -
Apr8g2253 339 SUPERFAMILY alpha/beta-Hydrolases 47 338 IPR029058 -
Apr8g2253 339 MobiDBLite consensus disorder prediction 42 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g2253 Apr-Chr8 32972330 32973785 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g2253 44 339 Carbohydrate Esterase AT5G16080 35.714 4.13e-58 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g2253 - - gmx:100777262 522.316
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g0778 6 12127594 12129332 Apr8g2253 8 32972330 32973785 PCT
Apr8g2253 8 32972330 32973785 Apr6g0780 6 12143241 12144509 PCT