Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g2252 ATGTCAAACCAGGTTAATCCTTTCCACCATCTCAAAATTGTACGCAACTCCAACGGCACCATCACTCGCCTGCGTCGAGACCCACACACCCCACCCACACCCGATCCCACCCTTCCCATCCCCGTTCTCACCAACGACGCCCCCATCAACCAATCAAACAACACCTTTGCTCGCATATTCCTACCCAGCAAAGCACTCCATCATTCCCCCAAAAAACTCCCTCTCATCGTTTATTTCCACGGCGGGGGATTCGTCCTATTCAGTGCAGCCTCCGATTTCCTTCAAGATGCCTGCATAAACCTCGCAAACGACGTCAACTCCATCGTCGTATCCGTAGAATACCGTCTTGCCCCCGAACACCGACTTCCCGCGGCGTACCACGATGCCGTGGAAGCGCTGCACTGGATCAAAGCGCAGTCAAACGATTGGTTGAGAAACCACGCTGATTACTCCAACTGTTACCTTATGGGAAGTAGCGCGGGAGCAAACATCGCGTACCACGCGGCTCTACGTGTGGCTGCGGAGGTTGACCGGGATTACCTGGGGCCCCTCAAGATCAGAGGCCTCATACTGACCCAACCGTTTTTCGGTGGAACAAAGAGGGTGCCCTCCGAGCTGAAGCTGGAAAACGATCCGGTTTTGCCGCCGCACGTGTGCGACTTGCTCTGGGAGTTGTCCTTGCCCGTTGGCGTTGACCGTGATCACGAGTATTGCAATCCAACGGCCGGTGATGGGCCTGCCATTTTGGATCGGGTGAGGCAACTTGGGTGGCGTGTGCTGGTGACTGGGTGCCATGGGGACCCACTGGTGCACCATCAGGTGGCACTGGCCAAGCTCATAAAGGAGAAGGGTGTGGCAGTGGTGAGCCATTTTAGTGAAGGTGGCTGTCACGGGATTGAGGTTCGTGACCGCACCCATCAAAAGCAATTGTATAACCTGGTCAATGATTTTATTGCTTCCTCTTCCTCCCTCCTTGGATTGGATGATTCAGGCTTAACCTAG 1002 0.5469 MSNQVNPFHHLKIVRNSNGTITRLRRDPHTPPTPDPTLPIPVLTNDAPINQSNNTFARIFLPSKALHHSPKKLPLIVYFHGGGFVLFSAASDFLQDACINLANDVNSIVVSVEYRLAPEHRLPAAYHDAVEALHWIKAQSNDWLRNHADYSNCYLMGSSAGANIAYHAALRVAAEVDRDYLGPLKIRGLILTQPFFGGTKRVPSELKLENDPVLPPHVCDLLWELSLPVGVDRDHEYCNPTAGDGPAILDRVRQLGWRVLVTGCHGDPLVHHQVALAKLIKEKGVAVVSHFSEGGCHGIEVRDRTHQKQLYNLVNDFIASSSSLLGLDDSGLT* 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g2252 333 Gene3D alpha/beta hydrolase 8 323 IPR029058 -
Apr8g2252 333 Pfam alpha/beta hydrolase fold 76 299 IPR013094 GO:0016787
Apr8g2252 333 PANTHER ARYLACETAMIDE DEACETYLASE 5 320 - -
Apr8g2252 333 SUPERFAMILY alpha/beta-Hydrolases 12 316 IPR029058 -
Apr8g2252 333 PANTHER CARBOXYLESTERASE 120-RELATED 5 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g2252 Apr-Chr8 32970840 32972111 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g2252 28 315 Carbohydrate Esterase AT5G16080 34.967 2.49e-47 161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g2252 - - gmx:100777786 507.679
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g0777 6 12115366 12120711 Apr8g2252 8 32970840 32972111 PCT
Apr8g2252 8 32970840 32972111 Apr6g0778 6 12127594 12129332 PCT