Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g2241 ATGGAAGCGAATCCTAACCACGACGGCGATTTCAACGAAGACGACGACACCCACAGCACCGACATCTCTCCCTCGGAGGCAACAACGCCAATGGCCAACCCGACGGAGTCGCCTCCGTCAGCGGCGGCACCGCCTCCGGATACGGCAGCTCCAATGAAGGAAGAACTCACGGACACGGAGCAAAGCGGGGACGCGTCTCTTCCGATGAGCGTTATTTCGATGCCGTTGGCGATGTCAACGCCGGCGGCAAAGAAACCGTCGAAGGATCGTCACACGAAGGTGGAGGGTCGCGGCCGGAGAATCCGGATGCCGGCGACGTGCGCCGCCAGGATCTTCCAACTGACGCGTGAGCTAGGCCACAAATCCGACGGAGAAACAATCCGGTGGTTGCTGGAGCACGCTGAACCGGCGATCATAGAAGCGACCGGCACCGGAACCATCCCGGCGATCGCGGTGTCAGTGGGCGGCACACTGAAGATTCCAACGACATCGTCGGCGAGACCGGAGGGAGAAGATACCCCAAGGAAGCGAAGGAGAAGAGCATCAAACAGTGAATTCATTGACATAAACAATGATCAAGTTTCGGTGTCTTCGGGACTCGCACCAATTGCACAAACTTCATATGGAGGCGGTGTTAGTGGTAGTGGCAGTGGCGGTGGATTAGTCCCTTTGTGGCCTGCGTCTAATGCTGGAGGCCCCTTTTTCATGTTCCCTAACTCTGCTAACCCTCCTCAGTATTGGGCCATTCCAGCAACTGCGGCCCCTTTTTTCAACGTTCAAGCCAGACCCATTTCGGGCTTTGTTTCCGCTATGCAGATTCAACCGAATAGTGCCTCCGATTCTGCTGACACTTGCTCTCCTATGTGCTCAACAACTGCTACTACTGTTCCTACTGTTAGTGCTGCTTCCACTTCTTCCGCTGCTACAACCACCCAAATGCTTAGGGATTTCTCTTTGGAAATTTATGACAAGAAAGAGCTTCCATTTTTGGGACGTCCTTCTCCCAATTCAGACCCTCCACCCACTTCCAAGCCTTCGAATTGA 1044 0.5479 MEANPNHDGDFNEDDDTHSTDISPSEATTPMANPTESPPSAAAPPPDTAAPMKEELTDTEQSGDASLPMSVISMPLAMSTPAAKKPSKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIRWLLEHAEPAIIEATGTGTIPAIAVSVGGTLKIPTTSSARPEGEDTPRKRRRRASNSEFIDINNDQVSVSSGLAPIAQTSYGGGVSGSGSGGGLVPLWPASNAGGPFFMFPNSANPPQYWAIPATAAPFFNVQARPISGFVSAMQIQPNSASDSADTCSPMCSTTATTVPTVSAASTSSAATTTQMLRDFSLEIYDKKELPFLGRPSPNSDPPPTSKPSN* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g2241 347 Pfam TCP family transcription factor 87 161 IPR017887 -
Apr8g2241 347 MobiDBLite consensus disorder prediction 1 21 - -
Apr8g2241 347 MobiDBLite consensus disorder prediction 333 347 - -
Apr8g2241 347 MobiDBLite consensus disorder prediction 169 185 - -
Apr8g2241 347 MobiDBLite consensus disorder prediction 22 36 - -
Apr8g2241 347 MobiDBLite consensus disorder prediction 326 347 - -
Apr8g2241 347 PANTHER TCP FAMILY TRANSCRIPTION FACTOR 32 343 - -
Apr8g2241 347 MobiDBLite consensus disorder prediction 159 185 - -
Apr8g2241 347 MobiDBLite consensus disorder prediction 1 66 - -
Apr8g2241 347 MobiDBLite consensus disorder prediction 78 97 - -
Apr8g2241 347 ProSiteProfiles TCP domain profile. 87 141 IPR017887 -
Apr8g2241 347 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 32 343 IPR005333 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g2241 Apr-Chr8 32862050 32864210 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g2241 79 330 TCP Transcription Factor Family AT5G51910 55.094 1.42e-78 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Apr8g2241 TCP 1.5e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g2241 - - gmx:100819475 426.402