Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g2236 ATGGCTGTTGCCAAGTGCAACAGCAGCAGTGAACATCCAACTTCTTACAATTGTTACAAAGTAACAAGCTTGTCTGAAACCATATTAGACACAAACGAAATCTCTAATCTGAAAGATCGATACATTCTTGGAGAGCAGTTGGGTTGGGGACAGTTTGGTGTCATAAGAGCGTGCTCTGACAAGCTGACTGGAGAGGTTTTGGCCTGCAAATCAATTTCTAAAGATAGGTTGGTTACTTCAGATGATCTGCAGAGTGTTAAACTTGAGATTGAGATAATGGCTAGGTTATCTGGGCACCCAAATGTTGTAGATCTCAAGGCAGTTTATGAAGAGGAAAATTTTGTTCATTTGGTGATGGAGCTTTGTGCTGGAGGGGAGCTTTTTCATTTGTTAGAGAAGCATGGGAGGTTTTCTGAATCTGAAGCTAGGGTTCTCTTTAGGCATCTCATGCAGATGGTTTTGTATTGTCATGAAAATGGGGTTGTTCATAGAGATTTGAAGCCTGAGAACATTCTCTTAGCTACTAGATCCTCCTCATCTCCAATTAAATTGGCAGACTTTGGGCTTGCAACCTATATCAAGCCTGGAGAGAGTTTGCATGGGTTAGTTGGGAGTCCATTCTATATTGCTCCAGAGGTACTGGCAGGTGCATATAACCAGGCTGCTGATGTCTGGAGTGCAGGGGTTATTCTTTACATTCTACTGAGTGGGATGCCTCCATTTTGGGGAAAGACAAAGTCACAGATATTTGAAGCGGTTAAGGCTGCTGATTTGAGGTTCCCATCTGATCCTTGGGATCTCATTTCTGAATCAGCTCAAAATTTGATCAGGGGAATGCTCTGCACAGAATCTTCTAAAAGACTCACCGCACAGGGGGTTTTGGATCATTGCTGGATGGAAAGCAATCAAACAAATACTGAACAACTAAGTGAACATAAAATCAGAAGTTGTGGAGATTTGGATGTTGGTAGCAACTCATTTTCTGGCTCGTTTATGTCCAGGAATCAGGACATCAGCTTTGGTGCTGGATCTCCCACATGTGGTTCTCAATCACCTACATTCACATGCAGATCCTCATTTTCTTCCTTTTTTGAGGAACCAGCAACACCTTGTTCTGTTTCTGGTGGGTTTTCATTTCAGAGCTCAGGTGGTTCCACTGATTTAGAATTTTGTTCTACTGTTCCCACAATGCATAGCTTTGCATTTCTCTGCCCCGTTTCTGTTGTTGAGCAAAGGGGCTGTAAATCAGAGCTCTCAACTAACATGTCAGATGTGAATGCAATTGCTGGAGATTCTCCCCTTTGCTTTGGACATGATGTTAAAGAAATGGATTGCAAGCCTGTAGAGGCTAAAAGGGCAGGTGGAGCAAATGGCCATAGGGCATTGGGACTCCACAGCAAAAGAAATCGGACAATCGGACTTGGTGAGCGGGAGCAACTTGATCTTGTGGTGACTGAATCAGTGATTCGTTGGTCATCATGCACACAACTTCCTACATCACCAAGATCATCTCTTGTCTGTTGA 1524 0.4318 MAVAKCNSSSEHPTSYNCYKVTSLSETILDTNEISNLKDRYILGEQLGWGQFGVIRACSDKLTGEVLACKSISKDRLVTSDDLQSVKLEIEIMARLSGHPNVVDLKAVYEEENFVHLVMELCAGGELFHLLEKHGRFSESEARVLFRHLMQMVLYCHENGVVHRDLKPENILLATRSSSSPIKLADFGLATYIKPGESLHGLVGSPFYIAPEVLAGAYNQAADVWSAGVILYILLSGMPPFWGKTKSQIFEAVKAADLRFPSDPWDLISESAQNLIRGMLCTESSKRLTAQGVLDHCWMESNQTNTEQLSEHKIRSCGDLDVGSNSFSGSFMSRNQDISFGAGSPTCGSQSPTFTCRSSFSSFFEEPATPCSVSGGFSFQSSGGSTDLEFCSTVPTMHSFAFLCPVSVVEQRGCKSELSTNMSDVNAIAGDSPLCFGHDVKEMDCKPVEAKRAGGANGHRALGLHSKRNRTIGLGEREQLDLVVTESVIRWSSCTQLPTSPRSSLVC* 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g2236 507 Gene3D Transferase(Phosphotransferase) domain 1 128 322 - -
Apr8g2236 507 CDD STKc_CAMK 40 298 - -
Apr8g2236 507 Gene3D Phosphorylase Kinase; domain 1 42 127 - -
Apr8g2236 507 ProSitePatterns Protein kinases ATP-binding region signature. 47 70 IPR017441 GO:0005524
Apr8g2236 507 PANTHER SERINE/THREONINE-PROTEIN KINASE 7 503 - -
Apr8g2236 507 ProSitePatterns Serine/Threonine protein kinases active-site signature. 161 173 IPR008271 GO:0004672|GO:0006468
Apr8g2236 507 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 34-LIKE 7 503 - -
Apr8g2236 507 SMART serkin_6 41 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g2236 507 SUPERFAMILY Protein kinase-like (PK-like) 38 364 IPR011009 -
Apr8g2236 507 Pfam Protein kinase domain 43 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g2236 507 ProSiteProfiles Protein kinase domain profile. 41 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g2236 Apr-Chr8 32829665 32833972 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g2236 24 304 EF-hand Containing Proteins AT3G57530 48.043 1.44e-95 294
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Apr8g2236 Pkinase 1.9e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g2236 - - gmx:100776088 825.469