Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g2233 ATGGATGGCAACCCTTTTGGAAACGTGCCAGTGCCACCTCCTCCAATACAAGTCCCTGACTTGGTTATCTCTTCCTCCACCTCAGCACCCACAACACCAACCCCAACCCCAACAACATCCTCGCCATCTCCGACACCCTCCGCTGCTGTCCGGTACCGGGGAACCCGGTGTCGGAGTGGTAAATGGGTGTCGGAGATACGTGAGCCACGTAAAACGAAGCGCATTTGGCTTGGAACATACCCGACAGCGGAAATGGCTGCAGCGGCTTATGATGTGGCTGCGCTTGCGTTGAAGGGGCCAGACACGCCCCTTAACTTCCCTAATTCGATACTCTCGTACCCAATTCCTGCGTCATTGTCGGCCACGGATATTCGAGCGGCTGCTGCAGCTGCTGCACAAGCGAGGATGGTGAGGCCAGCACAAGAGAGTGGAGAAATGATAAGAAACCCTGGTGGTGATGGGTCTTCGAGTGGACAAGGGTTGGAGACGCGTGAGGAGTACATTGATGAGGATGAGTTGTTGAACATGCCCAATTTGCTTGATGACATGGCCAGGGGAATGCAGGTTAGTCCCCCTAGGATGAGTTCCTTTTCTTCCGATGATTCGCCAGGGAATTCTGATGGAGATAACCTTTGGAGTTATACTCTTTGA 651 0.5346 MDGNPFGNVPVPPPPIQVPDLVISSSTSAPTTPTPTPTTSSPSPTPSAAVRYRGTRCRSGKWVSEIREPRKTKRIWLGTYPTAEMAAAAYDVAALALKGPDTPLNFPNSILSYPIPASLSATDIRAAAAAAAQARMVRPAQESGEMIRNPGGDGSSSGQGLETREEYIDEDELLNMPNLLDDMARGMQVSPPRMSSFSSDDSPGNSDGDNLWSYTL* 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g2233 216 ProSiteProfiles AP2/ERF domain profile. 51 107 IPR001471 GO:0003700|GO:0006355
Apr8g2233 216 Gene3D AP2/ERF domain 50 109 IPR036955 GO:0003700|GO:0006355
Apr8g2233 216 SMART rav1_2 51 113 IPR001471 GO:0003700|GO:0006355
Apr8g2233 216 MobiDBLite consensus disorder prediction 20 34 - -
Apr8g2233 216 MobiDBLite consensus disorder prediction 1 55 - -
Apr8g2233 216 Pfam AP2 domain 56 99 IPR001471 GO:0003700|GO:0006355
Apr8g2233 216 MobiDBLite consensus disorder prediction 139 161 - -
Apr8g2233 216 MobiDBLite consensus disorder prediction 179 216 - -
Apr8g2233 216 CDD AP2 51 109 IPR001471 GO:0003700|GO:0006355
Apr8g2233 216 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF026 36 214 - -
Apr8g2233 216 MobiDBLite consensus disorder prediction 191 216 - -
Apr8g2233 216 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 36 214 - -
Apr8g2233 216 SUPERFAMILY DNA-binding domain 52 109 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g2233 Apr-Chr8 32795085 32796478 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g2233 52 214 AP2-EREBP Transcription Factor Family AT5G52020 57.895 3.74e-48 156
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Apr8g2233 AP2 2.1e-10 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g2233 - - gmx:100776717 274.248