Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g2231 ATGGTGTCGAGTCGGTGTGCAGCTTGCAAGATTCAGGGAAGAAAGTGTCCTTCAGATTGCATTTTCTCTCCTTATTTCCCTCTTAATGATCCTCAAAGATATACTAGTGTCCATAGAATATATGGTGGTAGCAACGTTGGAAAAATGCTTCAATGCTTCAGCAAATTTCACCCTTTGTCAGAACACAGGCAGCAGACAGTTTTATATGATGAAGCAGAATGCCGTATTCAAGATCCTATTTATGGTTGTTACGGAAATATCTCTGAACGTGTTCAACAAATCAATAGTACAGAAAGTGAGTTAGCCAAAATCCAATCTCATATTAGCATTCTCAAGCTCCAAAACCCACAACTTGTGAATGAATCAAACTTCGATGTCTTGTTGCACAGAGCAGAATTGGACAGGTTCAGTTTGGCAGCCATGCAAGCCAAACTACTTGGTTTAATTATTTGA 453 0.3929 MVSSRCAACKIQGRKCPSDCIFSPYFPLNDPQRYTSVHRIYGGSNVGKMLQCFSKFHPLSEHRQQTVLYDEAECRIQDPIYGCYGNISERVQQINSTESELAKIQSHISILKLQNPQLVNESNFDVLLHRAELDRFSLAAMQAKLLGLII* 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g2231 150 Pfam Lateral organ boundaries (LOB) domain 5 105 IPR004883 -
Apr8g2231 150 ProSiteProfiles LOB domain profile. 4 108 IPR004883 -
Apr8g2231 150 PANTHER LOB DOMAIN-CONTAINING PROTEIN 23-RELATED 1 117 - -
Apr8g2231 150 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 1 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g2231 Apr-Chr8 32770038 32771376 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g2231 1 124 AS2 family AT3G26660 48.413 1.18e-34 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Apr8g2231 LOB 1.9e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g2231 - - aprc:113871821 308.145