Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g2226 ATGGCACCTTCTCGGGTGGCTGGAGGCTTAACTCGATCATCATCAAGTTCTGGAATATTTTTTCAAGGAGATGGGCAATCACAGAATGTAGTTAATTCTCATTTAAGCTCATCTTTCGGTAACTCATCTAACACGATTCCTGGAACTGGCCGTTCAAATCTGGGTCCGGTTTCTGGGGATATGAATAATGCAGTTTTAAACAGTGTGACAAACACAGCTCCAAGTGTTGGAGCTAGTTCTTTAGTCACAGATGCTAATTCTGCACTTTCTGGAGGCCCCCATTTGCAGAGAAGTGCAAGCTTTAACACAGATTCTTACTTACGATTACCTGCCTCACCAATGTCGTTTTCATCAAATAATATTAGTATTTCTGGGTCATCGGTTCTGGATGGTTCTTCTCAGAATCAGCAGCTGCCTCAAGGTGCTACGAGTGCTACATCTTTGCTTCCATCCCAAACTGGCCCAGCTCCGCTCCCAATGGATGCAAATAATTTATCCCAACTGCAGAAGAAACCTCGTCTGGATATCAAGCAGGAAGATATAGTGAAACAGCAGGTAATACATCAACTTCTTCAGAGACAAGACCCCATGCAATTACAGGGTCGAAATCCACAATTGCAGGCTTTGTTTCAGCAGCAGCAACAGAGACTAAGGCAACAACAACAAATCTTTCAATCAATGCCACAGTTACAGCGAGCACACATGCAGCAGCAGCAGCAGCATCATCATCAACAGCAACAACAACAAATGCAATTGAGGCAGCAGTTACAGCAACAAGTAATGCAGCCGTTATCTGGTGGAAAGCGCCCATTTGACAGTGGTGTCTGTGCCCGTCGACTGATGCAATACCTCTATCATCAAAGGCAGCGACCAAATGATAATAGTATTGCCTATTGGAGAAAATTTGTGGCTGAATATTACTCTCCTCGGGCAAAGAAACGGTGGTGCTTGTCATTGTATGATAATGTTGGTCATCATGCACTCGGTGTTTTCCCCCAAGCTGCTATGGATGCATGGCAGTGTGACATATGCTGTTCTAAATCTGGAAGGGGATTTGAGGCCACTTTTGAAGTACTACCTAGACTTAATGAAATCAAATTTGGCAGTGGTGTGATGGATGAACTTCTGTTTTTGGACTTGCCACGGGAATGCAGATTTACTTCTGGTTTGTTGATGATAGAATATGCAAAAGCAGTTCAAGAGAGTGTATATGAGCAGCTTCGTGTTGTTCGTGAGGGTCAACTTCGTATTATATTCACACAAGATCTGAAGATATTATCTTGGGAGTTTTGTGCTAGGCGGCATGAAGAACTTCTTCCTCGAAGGTTGGTTGCACCACAGGTTAACCAATTGGTTCAAGTAGCACAAAAATGCCAGAGTACACTTGCTGAAAGTGGATCTGATGGGATTTCTCAGCAGGAACTGCAAACAAACAGCAATATGGTATTGACAGCTGGACGCCATCTTGCAAAGAGTTTGGAGTTACAGTCTCTAAATGACTTGGGTTTCTCCAAAAGATATGTGAGGTGTTTGCAGATAGCTGAGGTTGTTAATAGCATGAAAGATCTGATAGATTTCTGTGCGGAGCACAAAGTTGGTGCAATTGAAAGCTTGAAAAATTATCCTCGACATGCAAATGCAGCCAAGCTTCATATCCAAAAGATGCAGGAGATGGAACAACTAACAAATGTTCAAGGTCTGCCGACTGATCAAAACACACTTAAGCTAATGGCAATGCATCCTGGCTTGAACAAAATCAACACTAATCATAATATGGGTAATCGAGGTGCTTTAAGTGGGCCGGCACAAGCTGCTTTGGCACTGACCAACTACCAGAATCTTCTCATGAGACAAAACTCAATGAATTCAAATTCTGCTGGCTCTACTCTGCGAGAAGGGTCATCTTCTTTCAATAATTCAAACCAGAGTCCATCTTCATCCTTGCAAGGTGCTGCTGCTGCTTTAATTCCAGGCTCAATGCAGAATTTATCTGTTAGTGGTTTCACAAATCCCCATCTGCAACAGCAGCAGCAGCAGCAGCAGCAGCAACACCAGTTGCAACAACTTCAACAGCGCTCTCTTAATGCAACAAATAACTTACCGCAACAAAATCATTCACAGGGCTCCCAAGGAAATCAGGCTCTACAACAGCAGATGATCCAGCAACTGCTGCAGATGTCTAATAACAACGGTGGGGTGCAACCACAGTCCCTTGGTGGACCCAGTATAAATGGGAGTATGGCTAAGAATGGGCTAGGCTTTGGAGGCCAGGCTCCACCTGTAACTGCAGGTACTACAACTGTTTCAGGGAGTAATGGACCTGTTCCTAACCGGAGCAATAGCTTCAAAGCTGCTTCAAACAGTGATTCTTCTGCAGCTGGTGCCAACAATGGATTCAACCAGAGAACAGCTGATATACCACAAAATCTCCATTTGCCAGAAGATGTGGGTCAAGATATTGGCAATGATTTCTTGGACAGTGGCTTTTTTAACAGTGATCTAGATGATAACTTGGGTTATGACTGGAAAGCTTGA 2535 0.4371 MAPSRVAGGLTRSSSSSGIFFQGDGQSQNVVNSHLSSSFGNSSNTIPGTGRSNLGPVSGDMNNAVLNSVTNTAPSVGASSLVTDANSALSGGPHLQRSASFNTDSYLRLPASPMSFSSNNISISGSSVLDGSSQNQQLPQGATSATSLLPSQTGPAPLPMDANNLSQLQKKPRLDIKQEDIVKQQVIHQLLQRQDPMQLQGRNPQLQALFQQQQQRLRQQQQIFQSMPQLQRAHMQQQQQHHHQQQQQQMQLRQQLQQQVMQPLSGGKRPFDSGVCARRLMQYLYHQRQRPNDNSIAYWRKFVAEYYSPRAKKRWCLSLYDNVGHHALGVFPQAAMDAWQCDICCSKSGRGFEATFEVLPRLNEIKFGSGVMDELLFLDLPRECRFTSGLLMIEYAKAVQESVYEQLRVVREGQLRIIFTQDLKILSWEFCARRHEELLPRRLVAPQVNQLVQVAQKCQSTLAESGSDGISQQELQTNSNMVLTAGRHLAKSLELQSLNDLGFSKRYVRCLQIAEVVNSMKDLIDFCAEHKVGAIESLKNYPRHANAAKLHIQKMQEMEQLTNVQGLPTDQNTLKLMAMHPGLNKINTNHNMGNRGALSGPAQAALALTNYQNLLMRQNSMNSNSAGSTLREGSSSFNNSNQSPSSSLQGAAAALIPGSMQNLSVSGFTNPHLQQQQQQQQQQHQLQQLQQRSLNATNNLPQQNHSQGSQGNQALQQQMIQQLLQMSNNNGGVQPQSLGGPSINGSMAKNGLGFGGQAPPVTAGTTTVSGSNGPVPNRSNSFKAASNSDSSAAGANNGFNQRTADIPQNLHLPEDVGQDIGNDFLDSGFFNSDLDDNLGYDWKA* 845
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g2226 844 MobiDBLite consensus disorder prediction 127 157 - -
Apr8g2226 844 Coils Coil 672 699 - -
Apr8g2226 844 MobiDBLite consensus disorder prediction 622 652 - -
Apr8g2226 844 MobiDBLite consensus disorder prediction 622 689 - -
Apr8g2226 844 Pfam LIM-domain binding protein 279 539 IPR029005 -
Apr8g2226 844 Coils Coil 235 255 - -
Apr8g2226 844 MobiDBLite consensus disorder prediction 659 689 - -
Apr8g2226 844 MobiDBLite consensus disorder prediction 8 59 - -
Apr8g2226 844 MobiDBLite consensus disorder prediction 728 744 - -
Apr8g2226 844 MobiDBLite consensus disorder prediction 760 802 - -
Apr8g2226 844 PANTHER LIM-DOMAIN BINDING PROTEIN/SEUSS-RELATED 700 839 - -
Apr8g2226 844 PANTHER LIM-DOMAIN BINDING PROTEIN/SEUSS-RELATED 5 699 - -
Apr8g2226 844 MobiDBLite consensus disorder prediction 1 59 - -
Apr8g2226 844 MobiDBLite consensus disorder prediction 228 254 - -
Apr8g2226 844 PANTHER LIM DOMAIN-BINDING PROTEIN 700 839 IPR029005 -
Apr8g2226 844 PANTHER LIM DOMAIN-BINDING PROTEIN 5 699 IPR029005 -
Apr8g2226 844 MobiDBLite consensus disorder prediction 728 802 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g2226 Apr-Chr8 32714824 32722360 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g2226 271 545 C2H2 Transcription Factor Family AT1G43850 59.273 3.02e-110 356
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g2226 - - pper:18787712 1118.22