Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g2221 ATGGGCTTTCTCCGGCGACTTTTCGGAGCCAAAAAATCTTCTGACGGGTCGGGTTCCAAATCCGGCAAGAGAAGATGGAGCTTCGCCAAACACTCCTTAAGGCACAAGTCACTCCCACCGCCACCGCCACCATCCGTCTTTGATCCCCCCACTCCCTTGGACGCCAATAAGCATGCCATCGCCGTCGCCGCCGCTACCGCCGCAGTTGCCGAGGCCGCTCTTGCCGCCGCCCACGCTGCCGCCGAGGTAGTCAGACTCACCAGCGGCGGCGTTGCCGGAAGTAGTACTAGCACCAGACCCACCGCGCCGCCGCCGGAGTATGTGGGCGAACCGCGGTTGCCGGAGGATACCGCCGCCGTTAAGATACAGTCGGCGTTTCGCGGTTACTTGGCAAGGAGAGCATTGAGAGCACTGAAAGCATTGGTGAAGTTGCAAGCATTGGTTAGGGGCCACATTGTGAGAAAGCAAACTGCAGATATGCTCAGGCGCATGCAAACGTTGGTGCGACTGCAGGCCCAGGCACGTGCAAGTCGTGCGCACCTGTCAGATAATATGCACTCTTTCAAGTCTTCCCTTTCTCATTATCCTGTCCCTGAAGAATACGAGCATCCACCTCGAGCCTACAGCACAAAATTTGATGGATCTTCTATGCTTAAGAGATGTAGTTCCAATGCCAATTTTAGTGTTGACTCAGAACGGGCACGGTTTAGTTCCAATTGGTTAGACCGATGGATGGAATTAGATAAAATGTGCAGACAAACTGGAAATGCTTCATTAAGAAATGGACAGCTTGATGATGATAAAAGTGACAAGATTCTCGAAGTAGATACTTGGAAGCCACACTTTAAGTCTCACCACAGTAGCAACTCCTTCCAGACAGCACATTATTATTTGAGCTCTGATTATAACAATGAGTCTCCATCAAAACGTTCAACAAAAGCTCTAAATCAAAGCTTCTCATCAAGGGAGGTGTTACAGCTAAACTCTTTGAGGTTTCACAAAGGAAAAGAAGAAGCAGCTTCCCGAACTGCTGATAATAGTCCACAAGCATTTTCAGCCACCTCTAGAACTGGAAGTGGTGCAAGGAAAGGTCCCTTTACACCTACGAGAAGTGAGTGTTCGTGGGGTTTCTTCAGTGGCTACTCGGGTTACCCCAATTACATGGCTAACACTGAATCTTTTAGAGCTAAGGTTAGATCACAAAGTGCACCAAGACAAAGGTTGGAGTTTGACAGATACGGTTCTACTAGGAGACCTGTTCAGGTTCTTTGTGACGTGGGGCCAAATTCAGACGGGGATTCTGATTTGAGGAATAAAGTCTTACCTGCCCCTAGCCGTGTGAACAGAATTGGTAGTACCAGTTTAAGGTGA 1371 0.4945 MGFLRRLFGAKKSSDGSGSKSGKRRWSFAKHSLRHKSLPPPPPPSVFDPPTPLDANKHAIAVAAATAAVAEAALAAAHAAAEVVRLTSGGVAGSSTSTRPTAPPPEYVGEPRLPEDTAAVKIQSAFRGYLARRALRALKALVKLQALVRGHIVRKQTADMLRRMQTLVRLQAQARASRAHLSDNMHSFKSSLSHYPVPEEYEHPPRAYSTKFDGSSMLKRCSSNANFSVDSERARFSSNWLDRWMELDKMCRQTGNASLRNGQLDDDKSDKILEVDTWKPHFKSHHSSNSFQTAHYYLSSDYNNESPSKRSTKALNQSFSSREVLQLNSLRFHKGKEEAASRTADNSPQAFSATSRTGSGARKGPFTPTRSECSWGFFSGYSGYPNYMANTESFRAKVRSQSAPRQRLEFDRYGSTRRPVQVLCDVGPNSDGDSDLRNKVLPAPSRVNRIGSTSLR* 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g2221 456 MobiDBLite consensus disorder prediction 90 112 - -
Apr8g2221 456 MobiDBLite consensus disorder prediction 1 52 - -
Apr8g2221 456 MobiDBLite consensus disorder prediction 335 367 - -
Apr8g2221 456 PANTHER IQ-DOMAIN 5-RELATED 1 454 - -
Apr8g2221 456 MobiDBLite consensus disorder prediction 36 50 - -
Apr8g2221 456 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 117 160 IPR027417 -
Apr8g2221 456 Gene3D - 115 167 - -
Apr8g2221 456 Pfam Protein of unknown function (DUF4005) 347 408 IPR025064 -
Apr8g2221 456 ProSiteProfiles IQ motif profile. 139 166 IPR000048 GO:0005515
Apr8g2221 456 SMART iq_5 114 136 IPR000048 GO:0005515
Apr8g2221 456 SMART iq_5 137 158 IPR000048 GO:0005515
Apr8g2221 456 PANTHER CALMODULIN-BINDING PROTEIN 1 454 - -
Apr8g2221 456 Pfam IQ calmodulin-binding motif 118 136 IPR000048 GO:0005515
Apr8g2221 456 Pfam IQ calmodulin-binding motif 139 156 IPR000048 GO:0005515
Apr8g2221 456 MobiDBLite consensus disorder prediction 342 364 - -
Apr8g2221 456 ProSiteProfiles IQ motif profile. 115 143 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g2221 Apr-Chr8 32671307 32675581 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g2221 1 410 IQD Protein Family AT5G62070 46.875 1.23e-66 217
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g2221 - - gmx:100783694 606.29