Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Apr8g2216 | ATGGCTTTACCCTTCAACCTCGTAATCTCGTACCTTGTCGCGTTCCACTTGTTCTGCGCCATTGCAGACCAAAACCCAGAAATAACTTCCCTCCTTTCCTTCAAGGAGGGTCTTCAAAACCCTAAACTTCTCGCTTCGTGGCACCCCTCCACCTCGCACTGCAACTGGGTCGGCGTCACGTGTCAACTCGGTCGAGTCACCTCGCTTTCTCTTCCATCTCTTTCCCTCAGTGGCACACTTCCTTCGCCCCTTTTCTCTCTCTCCTCACTCACTCTTCTCAACCTCGGTGACAACCAGCTTTCTGGCGAGCTTCCCGGCGAACTCGGCGAATTAGTTCAGCTTGAAACTCTTCGACTCGGTTCCAACTCGTTCGCCGGAAAAATCCCGCCGGAGCTGGGGTTATTGGCGAAACTCCGCACTCTCGACCTCTCTGGCAATGCACTCGCCGGAGAAATACCGGAGACTCTAGGAAACTTGAGCCGGCTTGAGTTCATGGACTTTAGTAACAACCTCCTCTCAGGTTCTCTTCCGATAACTCTCTTCACCGGAACTCAGTCTTTGATTTCTGTTGATATCTCGAACAACTCGTTTTCCGGCGTTCTGCCGCCGGAAATTGGGAACTGGAAGAACATCAGTGCACTTTACCTGGGGATTAACAAGTTGTCGGGTACGTTGCCGAAGGAAATTGGGAAGCTCTCGAGGCTTGAAATTTTGTATGCACCTTCCTGTTCCATCGAAGGTCCTTTGCCTGACGAAATGGCAGAGCTGAAGTCGTTGGCCAAGCTTGACCTTTCTTACAACCCGTTGAGATGTTCGATCCCAAAGTTTATTGGGAAGTTGCAGAATTTGAAAATTTTGAATCTTGTGTTTGCTCAGCTTAATGGGTCAGTGCCACCTGAGTTTGGGAATTGTAAGAGCCTGAGGTCTATGATGCTTTCTTTCAATTCACTTTCTGGCTTACTGCCCGAGGAGCTTTCTGAGCTCCCAATAATAACATTTTCAGCTGAAAAAAATCAGATTCATGGGCCTTTGCCTTCTTGGCTGGGAAAGTGGACTGATGTTAATTCTCTTTTGCTTTCTTCTAACCGTTTTTCTGGGGTGATTCCACCTCAACTTGGGAATTGCTCTGCAATGCAGCACCTTAGTTTAAGCAGTAATTTGTTGACTGGTCCCATACCTGAGGAGCTTTGTAAAGCTGCCTCACTTGTGGATATTGATCTTGATGACAACTTCCTTTCTGGTACAATTGAGAAAGCATTTGTCAAGTGTAAGAACCTTACCCAGTTGGTTTTGATGAACAATAGGGTTGTCGGTTCTATACCACAGTACCTTTCAGAGCTTCCCTTGATGGTGCTGGACCTGGATTCTAACAATTTTAGTGGAAAAATACCTTCTAGTCTTTGGAACTCATCAACTCTGTTGGAATTCTCTGCAGCTAATAACCGTTTGGAGGGGTCTCTTCCTGTGGAGATTGGGAATGTGGTTAGTCTACAGAGGCTTGTTCTTAGCAATAATAGACTGACAGGTACTATACCTAAGGAAATTGGAAGTCTCACAAGTCTTTCAGTTCTTAATTTGAATGGGAATATGCTTGAAGGGAATATTCCCACTGAGCTTGGTGATTGCATTTCCCTTACTACACTGGACCTTGGGAACAATCAACTCAAAGGGTCTATTCCTGAGAAGCTGGTGGAGCTAAGCCAATTACAGTGCTTGGTTCTTTCTCACAATAATCTGTCTGGGTCTATTCCTGCCAAGAAATCTTCATATTTTCGACAACTCACCATCCCTGACTTGAGCTTTGTTCAACACCTTGGTGTGTTTGATCTTTCTCACAATAGATTGTCTGGCACCATTCCTGATGAATTGGGGAGCTGTGTAGTGATTGTGGATCTCTTAGTTAGCAACAACATGCTTTCTGGGAGCATTCCAAGATCACTGGCACGCTTGACAAATCTTACAACTTTGGATTTGTCTAGCAACTTCTTGTCAGGTTCCATTCCATCAGAGCTTGGAGATGCCCTCAAACTCCAGGGTTTGTATCTGGGACAGAATCAACTATCAGGTACCATCCCTGAAAGTTTTGGGAAGTTGAGTAGTTTGGTGAAGCTGAATTTGACAGGAAATAAGTTGTCGGGTCCAATCCCAATTAGTTTTGGGAACATGAAGGAGTTGACTCACTTGGATTTGAGCTCTAATGAGCTCAGTGGTCAGCTTCCATCCTCTCTGTCAGGGGTGCAAAGCCTTGTTGGGCTTTATGTGCAGAAGAACAGGCTTTCTGGCCAAGTAGGGGACCTCTTCTCCAACTCCATGACATGGAGAATTGAGACAATGAATTTAAGTGATAATTGCTTCAACGGGAACTTGCCACGGTCTTTGGGAAATCTTTCTTACTTGACAAATTTGGATCTTCATGGAAATATGTTGACTGGACAGATTCCTTTAGACCTTGGGGATCTAATGCAATTGGAATATTTTGATGCTTCAGGTAATCAGCTAACTGGAAGGATTCCAGAGAAGCTATGCAGCCTAGTTAATCTGAACTACCTAGATTTGTCTCAAAACAGATTGGAAGGACCTATACCTAAAAGTGGTATTTGCCAAAACCTATCCAGAGTTAGATTTGTGGGGAACAAAAATCTTTGTGGCCAGTTGTTGGGTATAATTTGTCAGACCAAAAGCATTGGTAGATCAGCATTGTTTAATGCGTGGAGGCTTGCTGCAATTGCCATTACAATCATTTTACTAACTCTAAGCATTGCTTTTGTTCTACATAGATGGATTACCAGGAGGCAAAATGATCCTGAGGAGCTTGAGGAGCGCAAATTAAACAGTTATGTAGATCACAATCTTTATTTCTTGAGCAGTAGTAGATCAAAGGAACCTTTGAGTATCAATGTTGCAATGTTTGAGCAGCCTCTTCTGAAATTAACTTTGGTGGATATCCTTGAAGCCACTGACAACTTCAGCAAGACAAATATTATTGGAGACGGAGGCTTTGGAACTGTGTACAAGGCCACTTTACCTGATGGAAAAACAGTAGCTGTGAAGAAGCTTAGTGAAGCTAAAACGCAGGGTAATCGTGAGTTCATGGCTGAAATGGAGACCTTGGGCAAGGTGAAGCATCAAAATCTTGTTGCGTTGCTTGGATATTGCTCAATGGGCGATGAAAAACTCCTTGTTTACGAATATATGGTAAATGGGAGCTTAGATCTTTGGTTGAGAAATAGGACTGGGGCCCTTGAAATCCTTGACTGGAACAAACGTTACAAAATTGCAACCGGCGCAGCCCGAGGATTAGCTTTCCTTCATCATGGTTTCATACCTCACATCATCCACAGGGATGTTAAAGCTAGCAACATTTTACTCAATGAAGACTTTGAGCCAAAAGTTGCAGATTTTGGACTTGCAAGACTAATCAGTGCCTGTGAGACTCATATCACCACTGATATAGCTGGAACATTTGGTTACATTCCACCAGAGTATGGGCAGAGTGGGAGGTCCACAACAAGAGGAGATGTGTACAGTTTTGGTGTCATTTTACTTGAACTAGTGACTGGAAAAGAGCCAACTGGACCAGATTTTAAGGAGATTGAAGGTGGAAACTTGGTTGGATGGGTTAGTCAGAAGATCAAGAAGGGGCAAGCTGCTGATGTTCTTGATCCAACAGTTCTTGATGCTGATTCTAAGCAGATGATGCTTCAAATGCTGCACATTGCTTGTGTATGCCTCTCTGACAATCCTGCAAACAGGCCTACCATGCTTCAAGTACACAAATTCTTGAAGGGGATTAAGGGAGAGTAG | 3804 | 0.4409 | MALPFNLVISYLVAFHLFCAIADQNPEITSLLSFKEGLQNPKLLASWHPSTSHCNWVGVTCQLGRVTSLSLPSLSLSGTLPSPLFSLSSLTLLNLGDNQLSGELPGELGELVQLETLRLGSNSFAGKIPPELGLLAKLRTLDLSGNALAGEIPETLGNLSRLEFMDFSNNLLSGSLPITLFTGTQSLISVDISNNSFSGVLPPEIGNWKNISALYLGINKLSGTLPKEIGKLSRLEILYAPSCSIEGPLPDEMAELKSLAKLDLSYNPLRCSIPKFIGKLQNLKILNLVFAQLNGSVPPEFGNCKSLRSMMLSFNSLSGLLPEELSELPIITFSAEKNQIHGPLPSWLGKWTDVNSLLLSSNRFSGVIPPQLGNCSAMQHLSLSSNLLTGPIPEELCKAASLVDIDLDDNFLSGTIEKAFVKCKNLTQLVLMNNRVVGSIPQYLSELPLMVLDLDSNNFSGKIPSSLWNSSTLLEFSAANNRLEGSLPVEIGNVVSLQRLVLSNNRLTGTIPKEIGSLTSLSVLNLNGNMLEGNIPTELGDCISLTTLDLGNNQLKGSIPEKLVELSQLQCLVLSHNNLSGSIPAKKSSYFRQLTIPDLSFVQHLGVFDLSHNRLSGTIPDELGSCVVIVDLLVSNNMLSGSIPRSLARLTNLTTLDLSSNFLSGSIPSELGDALKLQGLYLGQNQLSGTIPESFGKLSSLVKLNLTGNKLSGPIPISFGNMKELTHLDLSSNELSGQLPSSLSGVQSLVGLYVQKNRLSGQVGDLFSNSMTWRIETMNLSDNCFNGNLPRSLGNLSYLTNLDLHGNMLTGQIPLDLGDLMQLEYFDASGNQLTGRIPEKLCSLVNLNYLDLSQNRLEGPIPKSGICQNLSRVRFVGNKNLCGQLLGIICQTKSIGRSALFNAWRLAAIAITIILLTLSIAFVLHRWITRRQNDPEELEERKLNSYVDHNLYFLSSSRSKEPLSINVAMFEQPLLKLTLVDILEATDNFSKTNIIGDGGFGTVYKATLPDGKTVAVKKLSEAKTQGNREFMAEMETLGKVKHQNLVALLGYCSMGDEKLLVYEYMVNGSLDLWLRNRTGALEILDWNKRYKIATGAARGLAFLHHGFIPHIIHRDVKASNILLNEDFEPKVADFGLARLISACETHITTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPDFKEIEGGNLVGWVSQKIKKGQAADVLDPTVLDADSKQMMLQMLHIACVCLSDNPANRPTMLQVHKFLKGIKGE* | 1268 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Apr8g2216 | 1267 | SUPERFAMILY | L domain-like | 29 | 272 | - | - | |
Apr8g2216 | 1267 | Gene3D | Ribonuclease Inhibitor | 24 | 181 | IPR032675 | - | |
Apr8g2216 | 1267 | PANTHER | UNNAMED PRODUCT | 604 | 1265 | - | - | |
Apr8g2216 | 1267 | PANTHER | UNNAMED PRODUCT | 108 | 271 | - | - | |
Apr8g2216 | 1267 | PANTHER | UNNAMED PRODUCT | 423 | 671 | - | - | |
Apr8g2216 | 1267 | PANTHER | UNNAMED PRODUCT | 333 | 606 | - | - | |
Apr8g2216 | 1267 | PANTHER | UNNAMED PRODUCT | 23 | 238 | - | - | |
Apr8g2216 | 1267 | PANTHER | UNNAMED PRODUCT | 172 | 441 | - | - | |
Apr8g2216 | 1267 | Gene3D | Phosphorylase Kinase; domain 1 | 952 | 1064 | - | - | |
Apr8g2216 | 1267 | ProSiteProfiles | Protein kinase domain profile. | 989 | 1261 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Apr8g2216 | 1267 | SMART | LRR_sd22_2 | 542 | 568 | - | - | |
Apr8g2216 | 1267 | SMART | LRR_sd22_2 | 135 | 161 | - | - | |
Apr8g2216 | 1267 | SMART | LRR_sd22_2 | 722 | 748 | - | - | |
Apr8g2216 | 1267 | SMART | LRR_sd22_2 | 650 | 673 | - | - | |
Apr8g2216 | 1267 | SMART | LRR_sd22_2 | 796 | 817 | - | - | |
Apr8g2216 | 1267 | SMART | LRR_sd22_2 | 844 | 872 | - | - | |
Apr8g2216 | 1267 | Pfam | Leucine rich repeat N-terminal domain | 25 | 61 | IPR013210 | - | |
Apr8g2216 | 1267 | SUPERFAMILY | L domain-like | 591 | 883 | - | - | |
Apr8g2216 | 1267 | PANTHER | LEUCINE-RICH REPEAT RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED | 172 | 441 | - | - | |
Apr8g2216 | 1267 | PANTHER | LEUCINE-RICH REPEAT RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED | 333 | 606 | - | - | |
Apr8g2216 | 1267 | PANTHER | LEUCINE-RICH REPEAT RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED | 108 | 271 | - | - | |
Apr8g2216 | 1267 | PANTHER | LEUCINE-RICH REPEAT RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED | 604 | 1265 | - | - | |
Apr8g2216 | 1267 | PANTHER | LEUCINE-RICH REPEAT RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED | 23 | 238 | - | - | |
Apr8g2216 | 1267 | PANTHER | LEUCINE-RICH REPEAT RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED | 423 | 671 | - | - | |
Apr8g2216 | 1267 | SUPERFAMILY | Protein kinase-like (PK-like) | 970 | 1261 | IPR011009 | - | |
Apr8g2216 | 1267 | SMART | LRR_typ_2 | 159 | 183 | IPR003591 | - | |
Apr8g2216 | 1267 | SMART | LRR_typ_2 | 722 | 745 | IPR003591 | - | |
Apr8g2216 | 1267 | SMART | LRR_typ_2 | 518 | 542 | IPR003591 | - | |
Apr8g2216 | 1267 | SMART | LRR_typ_2 | 543 | 566 | IPR003591 | - | |
Apr8g2216 | 1267 | SMART | LRR_typ_2 | 844 | 869 | IPR003591 | - | |
Apr8g2216 | 1267 | SMART | LRR_typ_2 | 796 | 820 | IPR003591 | - | |
Apr8g2216 | 1267 | SMART | LRR_typ_2 | 650 | 674 | IPR003591 | - | |
Apr8g2216 | 1267 | SMART | LRR_typ_2 | 494 | 517 | IPR003591 | - | |
Apr8g2216 | 1267 | SMART | LRR_typ_2 | 602 | 626 | IPR003591 | - | |
Apr8g2216 | 1267 | SMART | LRR_typ_2 | 87 | 111 | IPR003591 | - | |
Apr8g2216 | 1267 | SMART | LRR_typ_2 | 698 | 721 | IPR003591 | - | |
Apr8g2216 | 1267 | SMART | LRR_typ_2 | 256 | 280 | IPR003591 | - | |
Apr8g2216 | 1267 | SMART | LRR_typ_2 | 135 | 158 | IPR003591 | - | |
Apr8g2216 | 1267 | Gene3D | Ribonuclease Inhibitor | 398 | 470 | IPR032675 | - | |
Apr8g2216 | 1267 | Gene3D | Ribonuclease Inhibitor | 332 | 397 | IPR032675 | - | |
Apr8g2216 | 1267 | Pfam | Leucine Rich Repeat | 725 | 745 | IPR001611 | GO:0005515 | |
Apr8g2216 | 1267 | Pfam | Leucine Rich Repeat | 137 | 159 | IPR001611 | GO:0005515 | |
Apr8g2216 | 1267 | SMART | serkin_6 | 989 | 1261 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Apr8g2216 | 1267 | ProSitePatterns | Protein kinases ATP-binding region signature. | 995 | 1018 | IPR017441 | GO:0005524 | |
Apr8g2216 | 1267 | Gene3D | Transferase(Phosphotransferase) domain 1 | 1065 | 1267 | - | - | |
Apr8g2216 | 1267 | PRINTS | Leucine-rich repeat signature | 725 | 738 | - | - | |
Apr8g2216 | 1267 | PRINTS | Leucine-rich repeat signature | 844 | 857 | - | - | |
Apr8g2216 | 1267 | Gene3D | Ribonuclease Inhibitor | 471 | 591 | IPR032675 | - | |
Apr8g2216 | 1267 | SUPERFAMILY | L domain-like | 272 | 366 | - | - | |
Apr8g2216 | 1267 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 1111 | 1123 | IPR008271 | GO:0004672|GO:0006468 | |
Apr8g2216 | 1267 | Gene3D | Ribonuclease Inhibitor | 592 | 893 | IPR032675 | - | |
Apr8g2216 | 1267 | Gene3D | Ribonuclease Inhibitor | 182 | 331 | IPR032675 | - | |
Apr8g2216 | 1267 | SUPERFAMILY | L domain-like | 336 | 600 | - | - | |
Apr8g2216 | 1267 | Pfam | Leucine rich repeat | 651 | 711 | IPR001611 | GO:0005515 | |
Apr8g2216 | 1267 | Pfam | Protein kinase domain | 990 | 1258 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Apr8g2216 | Apr-Chr8 | 32613790 | 32617643 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Apr8g2216 | 21 | 1264 | Receptor kinase-like Gene Family | AT5G07280 | 60.480 | 0.0 | 1442 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-Xb-1 | Apr8g2216 | Pkinase | 2.2e-46 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Apr8g2216 | - | - | gmx:100780446 | 2156.72 |