Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g2184 ATGGAGTTTCTAGGGCTATCTGGGATTCTTGTTGCCTTCTTGGCAATGCTTTGCCTTTTCTTGCTCATGATACTAACGTTTTCTTGGTGGATTTTCCCTATCCAAACACATAAGAAGCTTAGGAAATGTGGGTTGGGAGGGCCAACCCCAAGTTTTCCACTTGGAAACATTAAAGAGATGAAAAGAAAGAATAACATTCAATCTTTAGTTGCATCCTCAAATCTCCCACATGACATACACTCGTACGTTTTCCCCTACTTTTCTAGCTGGCAGAAATCACATGGTAAGCTGTTCGTGTACTGGCTGGGCACAGAGCCATTTTTGTACATTGCTGACCCAGAATTCTTGAAGAAAATGTCAGCAGAGGTGATGGCGAAGAGATGGGGAAAACCAAGTGTGTTTAGAAATGATAGAGACCCCATGTTTGGAAGTGGTTTGGTCATGGTTGAGGGCAATGATTGGGTTCGTCACCGCCACATTGTTGCCCCCGCATTCAACCCCATTAATCTCAAGAACATGGCAAACATGATGGTTGAATCTACGAATCAAATGATAGACAGATGGGCTACCCAAATAAACTCGGGTGAACCCGAAATTGACGTGGAGAGAGAGATTATAGCGACAGCTGGGGAGATCATAGCCAGAACAAATTTTTGCATGAAAGATAACAATGCAAGAGATGTTTTTGACAAATTACGAGCTTTGCAAATGACTCTCTTTAAGAATAATCGATATGTGGGGGTTCCCTTGGGCAAGTATTTCAACGTGAAGAAAACCCTAGAGGCCAAAAAACTTGGGAAAGAAATCGATGAGCTTTTGTTGTCCATTATAGAAGCTCGAATGAGTTCAGCCACAAAAAATTCTGAACAAGATTTGTTAGGTATATTGTTGCGAGAAAATCATCGGGCTGACGGCCAATTAGGAAAGACATTAACAATGCGAGAAGTGGTTGATGAATGCAAGACCTTTTTCTTTGGTGGCCATGAAACCACAGCACTTGCTATCACATGGACTTTGCTGCTTCTAGCCATGCACGAAGATTGGCAGAATCAGTTGAGAGACGAGATAAGACAAGTTGTGGGAAACAGCGAACTTGATATCACTATGCTTGCTGGACTGAAAAAGATGAAGTGTGTGATGAACGAAGTTCTAAGACTGTACCCACCATCACCAAATGTGCAAAGGCAAGCTAGGGAAGACATTCATGTAGATGATATAACAGTGCCTAATGGAACCAACGTTTGGATCGATGTGGTAGCTATGCACCACGACCCTGAATTATGGGGAAAGGATGCGAATGAGTTTAGACCAGAGAGGTTCATGGATGATGTGAATGGTGGGTGCAACCATAAGATGGGGTATTTGCCTTTTGGGTTTGGAGGGAGAATGTGTGTTGGTAGGAACTTAACCTTTATGGAATACAAAGTTGTGTTAACCCTACTTCTCTCTAGGTTTAGTTTTAAGGTTTCCCCAAGTTACCATCATTCACCATCTATCATGCTCTCTCTAAGGCCCACTCACGGCCTTCCACTCATAGTTCAACCCCTTTAA 1551 0.4268 MEFLGLSGILVAFLAMLCLFLLMILTFSWWIFPIQTHKKLRKCGLGGPTPSFPLGNIKEMKRKNNIQSLVASSNLPHDIHSYVFPYFSSWQKSHGKLFVYWLGTEPFLYIADPEFLKKMSAEVMAKRWGKPSVFRNDRDPMFGSGLVMVEGNDWVRHRHIVAPAFNPINLKNMANMMVESTNQMIDRWATQINSGEPEIDVEREIIATAGEIIARTNFCMKDNNARDVFDKLRALQMTLFKNNRYVGVPLGKYFNVKKTLEAKKLGKEIDELLLSIIEARMSSATKNSEQDLLGILLRENHRADGQLGKTLTMREVVDECKTFFFGGHETTALAITWTLLLLAMHEDWQNQLRDEIRQVVGNSELDITMLAGLKKMKCVMNEVLRLYPPSPNVQRQAREDIHVDDITVPNGTNVWIDVVAMHHDPELWGKDANEFRPERFMDDVNGGCNHKMGYLPFGFGGRMCVGRNLTFMEYKVVLTLLLSRFSFKVSPSYHHSPSIMLSLRPTHGLPLIVQPL* 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g2184 516 Gene3D Cytochrome P450 29 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr8g2184 516 Pfam Cytochrome P450 84 494 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr8g2184 516 PANTHER CYTOCHROME P450 FAMILY 72 PROTEIN 5 511 - -
Apr8g2184 516 SUPERFAMILY Cytochrome P450 79 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr8g2184 516 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 457 466 IPR017972 GO:0005506|GO:0016705
Apr8g2184 516 PRINTS P450 superfamily signature 326 343 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr8g2184 516 PRINTS P450 superfamily signature 378 389 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr8g2184 516 PRINTS P450 superfamily signature 455 464 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr8g2184 516 PRINTS P450 superfamily signature 464 475 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr8g2184 516 PRINTS E-class P450 group I signature 91 110 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr8g2184 516 PRINTS E-class P450 group I signature 315 332 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr8g2184 516 PRINTS E-class P450 group I signature 335 361 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr8g2184 516 PRINTS E-class P450 group I signature 377 395 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr8g2184 516 PRINTS E-class P450 group I signature 418 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr8g2184 516 PRINTS E-class P450 group I signature 454 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr8g2184 516 PRINTS E-class P450 group I signature 464 487 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr8g2184 516 PANTHER CYTOCHROME P450 FAMILY MEMBER 5 511 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g2184 Apr-Chr8 32373952 32376487 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g2184 1 516 Cytochrome P450 AT5G52400 57.795 0.0 646
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g2184 - - gmx:100785284 915.605
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g0697 6 10650929 10654990 Apr8g2184 8 32373952 32376487 PCT