Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g2182 ATGATTCCTTTCTTATCTTCCAAGATGAACGTCTTCGTGGCCTTCGCATTTTTCTATCTAACCACGCTGGTTCGCTCGGAAGAGAGGCTTCTGGTGAACATGACGCTGGTTCCGAAGGCTCGTGCTAGCGGTGCTTTTTGTTTGGACGGTAGTTTACCGGCGTATCATTTGGACAGAGGATTTGGAGCTGGCGAAAATAACTGGCTTCTACAGTTTGAGGGAGGTGGGTGGTGCAATGACTTGACATCATGCTTGGGGAGAGCCCGAACTCGAAGGGGCTCAACACGTTATATGACAAAGTGGGAGGTTTTCTCTGGTATCTTAAGCAACAATGCCACCCTCAATCCAGACTTTTACAATTGGAACCGTGTGAAGCTGAGATATTGCGATGGAGCTTCATTTACTGGAGACGCTGTGTTCAGTAACAAGACAACAACACTTTATTTCAAAGGGCAGAAGATTTGGGAAGCCATTATCCGCGACCTTTTACCAAAAGGATTGGGAAAGGCACGCAAGGCTTTGCTTTCAGGCTGCTCTGCAGGAGGCTTAGCGACCTTTCACCACTGTGATGGCTTAGCCAAGTATTTGCCAACGAATGCTAGTATTAAATGCTTGAGTGATGCCGGTTTTTTTCTTGACGGAAGAGATGTAAGTTTGAACCACACTATGAGGTTCTTCGTCAAAAGTCTAGTTCAATTGCAGGGGATAGAGCAGAACTTGAATCGAAATTGCACTAGAGCGCTGTACTTTCCAGACTTGTGCTTCTTTCCACAATATGCGTTGGGATACATATCAACACCATATTTTATCTTGAACTCTGCCTATGATGTATTCCAATTCCATCATATCTTGGTGCCACCCTCTGCTGATGTGCGCGGACACTGGAACCACTGCAAGCTGAACCCTGCGGCATGCACACCAGATCAAATTAATACATTGCAAGGTTTTAGGCTCGACATGCTTGCTGCTTTGAGACCGTTCTCTATATATTCAAGAAGAGGGGGAATGTTTATAAATTCATGTTTTGCTCATTGCCAAAGTGAATTGCAAGAAACATGGTTTGGGGCTGATTCTCCGAGAGTAAACAACAAGACTATTGCAGAAGCGGTTGGTGATTGGTATTTTAGTAGAAACAGAAGCAAGGAAATAGACTGTGCATATCCATGTGATACAACATGTCACAATCTTATACCATAA 1197 0.4436 MIPFLSSKMNVFVAFAFFYLTTLVRSEERLLVNMTLVPKARASGAFCLDGSLPAYHLDRGFGAGENNWLLQFEGGGWCNDLTSCLGRARTRRGSTRYMTKWEVFSGILSNNATLNPDFYNWNRVKLRYCDGASFTGDAVFSNKTTTLYFKGQKIWEAIIRDLLPKGLGKARKALLSGCSAGGLATFHHCDGLAKYLPTNASIKCLSDAGFFLDGRDVSLNHTMRFFVKSLVQLQGIEQNLNRNCTRALYFPDLCFFPQYALGYISTPYFILNSAYDVFQFHHILVPPSADVRGHWNHCKLNPAACTPDQINTLQGFRLDMLAALRPFSIYSRRGGMFINSCFAHCQSELQETWFGADSPRVNNKTIAEAVGDWYFSRNRSKEIDCAYPCDTTCHNLIP* 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g2182 398 PANTHER PECTIN ACETYLESTERASE 9 24 398 - -
Apr8g2182 398 Pfam Pectinacetylesterase 26 378 IPR004963 GO:0016787
Apr8g2182 398 PANTHER NOTUM-RELATED 24 398 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g2182 Apr-Chr8 32335820 32346231 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g2182 11 398 Carbohydrate Esterase AT5G23870 68.718 0.0 556
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g2182 K19882 - gmx:100802358 710.679