Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g2170 ATGCCTTCATGGTGGGGAAAATCGTCATCAAAAGAAACCAAGAAGAAAGCTAGTAAGGAAAGTTTTATTGATACATTGCACCGAAAATTTAAAATTCCATCTGAAGGTAAACTAAGCAATGGATCTGGAGGATCTCGTAGACATTGCAATGACACAATTTCAGAGAAGGGGGATCGTTCTCCATCTGAATCAAGATCGCCTTCACCTTCCAAAGTGGCAAGGTGTCAAAGTTTTGCTGAAAGGCCTCATGCTCAGCCACTTCCACCTCCTGGTCTGCACCCTTCAAGTGTAGGCCGAGTAGATTCTGAAATTAGCATATCATCAAAGTCAAGATTGGAAAAAGGTTCCAAGCCATCACTGCTTCTTCCACTTCCAACACCTGGATGCATACGTTATAGGCCAAACCCTGCAGATTTGGATGGAGATGTGATCACTGCTTCTATTTTTAGTGATTGCTCTGCTGATAGTGATGAGCCGGCAGACTCACACAATCGTAGTCCTCTGGCAACTGAGACTGAGACTGGGACTAGAACTGCAGCTGGCAGTCCTTCCAGCTTGATGCTCAAGGATCAATCACCAGCTCTTTCCCAATTGCATTCAAGAGAAGTAAAAAAACCAGTAAATATTCTAAGTAATCATATGTCTTCTACTTCACCAAAACGGAGGCCTTTACGCAACCATGTTCCAAATCTTCAGGTTCCTCCTCACGGTGCCTATTATAGTGCTCCTGATAGTTCCTTGTCAAGTCCATCAAGGAGTCCATTGAGAGCATTTGGCACAGATCAGGTGTTGAACTCTGCTTTTTGGGCTGGAAAGCCATATTCAGAGGTGAATTTAGTTGGATCTGGGCATTGCTCTAGTCCAGGTTCTGGGCATAATTCAATGGGAGGGGATATGTCAGGACCATTATTATGGCAACCAAGCAGGGGTAGCCCTGAGTATTCTCCAGTACCTAGTCCCAGAATGACCAGCCCTGGTCCAAGCTCTAGAATTCAGAGTGGAGCAGTGACACCTATTCATCCTAAAGCTGGGGGAACACCCGCGGAGGCACCGACAGGATGGGTTGATGATGGAAAACAGCAGAGTCATCGTTTGCCCCTTCCTCCTTTGACAGTTACCAATTCCTCGCTGTTCTCTCATTCTAATTCTGCAGCAACATCTCCGTCTATGCCAAGAAGTCCAGCTAGAGCAGATAATCCAAGCTCTGGCTCACGTTGGAAAAAAGGGAAGCTGCTTGGCAGAGGTACTTTTGGGCATGTCTATATTGGCTTCAATAGTGAAAGTGGTGAAATGTGTGCAATGAAGGAGGTTACTCTGTTTTCAGATGATCCCAAGTCTATGGAAAGTGCTAAGCAATTAATGCAGGAAATTCATTTATTGAGCCGTTTACGGCATCCAAATATTGTGCAGTATTATGGTTCTGAACCAGTGGATGACAAACTTTACATATATCTTGAGTATGTATCTGGAGGCTCCATACATAAACTTCTTCAAGAATATGGGAAATTTGGTGAACTAGCTATTCGTAGTTATACTCAACAAATTTTGTCAGGGCTTGCTTATTTACATGCTAAAAATACTCTCCATAGGGATATCAAAGGAGCAAATATACTTGTTGATCCAAATAGTCGGGTCAAGTTGGCAGACTTTGGCATGGCAAAACATATGACAGGTCAATCTTGTCCATTGTCGTTCAAGGGAAGCCCTTACTGGATGGCTCCCGAGGTTATAAAGAACTCTAATGGATGCTCCCTTGCTGTGGATATATGGAGTCTTGGATGCACAGTTTTGGAAATGGCTACAACCAAGCCTCCTTGGTTTCAGTATGAAGGGGTTGCTGCCATGTTCAAGATTGGTAATAGCAAGGAACTCCCAACAATTCCAGATCATCTCTCAAATGAAGGAAAAGATTTTGTTAGGAAATGTCTTCAACGTAACCCACATGATCGCCCTTCAGCCAGTGAATTATTGGACCACCCTTTTGTAAAATGTGCAGCACCTTTGGAAAGACCTATTCTGGTTCCTGAAGCTTCAGACCCTGTTTCTGTGATTACATATGGAACAAAAGCTCTGGGCATTGGACAAGGAAAGAATGCATCTGCCTTGGATTCAGATAGACTCGCTGTTCATTCTTCTAGATTTTTGAAAATCAATCCACATGAAAGTGAAATCCATATTCCAAGGAATATATCTTGCCCTGTGTCTCCCATTGGAAGCCCACTTTTGAAGTCAAGATCACCACAGCACAGGAGTGGGAAAATGTCTCCTTCTCCTATATCTAGCCCGCGGACTGCTTCTGGTGCATCCACACCTCTTGCTGGTGGCAGTGGTGCCATTCCATTTAGTAATCACCTGAAACAGGCAATTTACCTTCAAGAGGGTTTTGGAAGCATGCTAAAGTCCTCAAACGGTGTCTACGTTAATGGCCCTGCTCATCATGACTCAAATGTTGACATTTTTCGAGGAATGCAACTGGGGTCTCACATTTCATCAGAACTGATTTCCAGTGAAAATGATGTTCTGGTTAAGCAGTTTGCAAGGCCTCATCTTGCAGAGCGATATGATTTTCAATCAGTCTTGGCTGATCGTGTTGGCCGACAGCTGCTGGGGGAACATGTTAAGATTAACCCATCCCTTGATCCTAGTCCCAACTCATCTTTGCTTAGCCGAGCAAATGGTTTATGA 2685 0.4391 MPSWWGKSSSKETKKKASKESFIDTLHRKFKIPSEGKLSNGSGGSRRHCNDTISEKGDRSPSESRSPSPSKVARCQSFAERPHAQPLPPPGLHPSSVGRVDSEISISSKSRLEKGSKPSLLLPLPTPGCIRYRPNPADLDGDVITASIFSDCSADSDEPADSHNRSPLATETETGTRTAAGSPSSLMLKDQSPALSQLHSREVKKPVNILSNHMSSTSPKRRPLRNHVPNLQVPPHGAYYSAPDSSLSSPSRSPLRAFGTDQVLNSAFWAGKPYSEVNLVGSGHCSSPGSGHNSMGGDMSGPLLWQPSRGSPEYSPVPSPRMTSPGPSSRIQSGAVTPIHPKAGGTPAEAPTGWVDDGKQQSHRLPLPPLTVTNSSLFSHSNSAATSPSMPRSPARADNPSSGSRWKKGKLLGRGTFGHVYIGFNSESGEMCAMKEVTLFSDDPKSMESAKQLMQEIHLLSRLRHPNIVQYYGSEPVDDKLYIYLEYVSGGSIHKLLQEYGKFGELAIRSYTQQILSGLAYLHAKNTLHRDIKGANILVDPNSRVKLADFGMAKHMTGQSCPLSFKGSPYWMAPEVIKNSNGCSLAVDIWSLGCTVLEMATTKPPWFQYEGVAAMFKIGNSKELPTIPDHLSNEGKDFVRKCLQRNPHDRPSASELLDHPFVKCAAPLERPILVPEASDPVSVITYGTKALGIGQGKNASALDSDRLAVHSSRFLKINPHESEIHIPRNISCPVSPIGSPLLKSRSPQHRSGKMSPSPISSPRTASGASTPLAGGSGAIPFSNHLKQAIYLQEGFGSMLKSSNGVYVNGPAHHDSNVDIFRGMQLGSHISSELISSENDVLVKQFARPHLAERYDFQSVLADRVGRQLLGEHVKINPSLDPSPNSSLLSRANGL* 895
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g2170 894 ProSiteProfiles Protein kinase domain profile. 406 662 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g2170 894 MobiDBLite consensus disorder prediction 875 894 - -
Apr8g2170 894 SMART serkin_6 406 662 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g2170 894 MobiDBLite consensus disorder prediction 9 34 - -
Apr8g2170 894 MobiDBLite consensus disorder prediction 165 198 - -
Apr8g2170 894 ProSitePatterns Protein kinases ATP-binding region signature. 412 435 IPR017441 GO:0005524
Apr8g2170 894 MobiDBLite consensus disorder prediction 100 114 - -
Apr8g2170 894 MobiDBLite consensus disorder prediction 366 400 - -
Apr8g2170 894 Gene3D Transferase(Phosphotransferase) domain 1 403 678 - -
Apr8g2170 894 MobiDBLite consensus disorder prediction 878 894 - -
Apr8g2170 894 MobiDBLite consensus disorder prediction 1 128 - -
Apr8g2170 894 MobiDBLite consensus disorder prediction 209 223 - -
Apr8g2170 894 Pfam Protein kinase domain 407 662 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g2170 894 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 1 806 - -
Apr8g2170 894 MobiDBLite consensus disorder prediction 741 771 - -
Apr8g2170 894 SUPERFAMILY Protein kinase-like (PK-like) 390 663 IPR011009 -
Apr8g2170 894 MobiDBLite consensus disorder prediction 150 229 - -
Apr8g2170 894 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE YODA 1 806 - -
Apr8g2170 894 MobiDBLite consensus disorder prediction 737 772 - -
Apr8g2170 894 MobiDBLite consensus disorder prediction 286 409 - -
Apr8g2170 894 CDD STKc_MEKK1_plant 405 662 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g2170 Apr-Chr8 32244705 32253206 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g2170 4 883 MAP Kinase Kinase Kinase AT1G63700 58.202 0.0 856
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Apr8g2170 Pkinase 3e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g2170 K20717 - gmx:100797994 1511.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g0678 6 10249705 10257647 Apr8g2170 8 32244705 32253206 PCT