Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g2163 ATGGACACCCAAAACCTCATTATACCTTTAGTCTTTCTCTTTTTCATACCCTCCTTAGTTTCCTTCACTCCTACAGATAACTACCTTCTTAGCTGTGGAACACACAGCAATGTTTCTCTCTTCAACCGAGTCTTCATGAGCGATTCCAACAACCCAGGCTCCACTTTTCTCTCTGCAGATAACACCATTTCACTCACATACCAAAAGCCACCTCAAAATTTGCCCACTTTGTACCGCACAGCCAGAGTTTTCAGAAGCACTGGGAGATACACGTTCAACATGAAGAAAAACGGTACCCACTTGGTGCGTTTTCATTTCTCCCCCTTTAAAGCTCAAACTTTTGATCTGAAATCTGCGAAATTCAGTGTCTTTCTTAATGGGATTTCGGTCATGCGCAATTTCCAGCCACCTAGTGATGTTCTGCTCAAAGAGTTTATTTTGAAGATAGAATCAAACTCGCTTGAAATTTTGTTTAGACCTGTTGGTAACTCAGGTTTTGCCTATGTTAATGCTGTGGAGGTGTTTACTGCCCCTGTGGATTTTGTTATAGATTTTGGAGCCAGGTTGGTTGGTGCTTCTGGGGTAGAGGAGTATAGAAACCTTTCATCTCAGGTTTTGGAAACTATTCATAGGATTAATGTTGGAGGTTTAAAAATTACTCCTTTCAATGACACCCTTTGGAGGACTTGGATTCCTGACGAGGATTATCTGGTGTTTAAGGGTGCAGCTAAGCCCGCAGTTAGCACTAACACACCAAATTACCAAAAGGGAGGTGCGAGTAGAGAGATCGCGCCTGAAAATGTTTACATGACTGCTCAACAGATGAATAGGGGAAACTCAAGTTTAGCTTCAAGGTTCAACATAACTTGGAATTTCCCTGTGTCTCCTGGTGGGGTTCCACACTTGGTTAGGTTGCATTTCTGTGATATTGTTAGTCCTGCCCTCAACTTGCTTTACTTTGATGTGTATATCAATGGGTACATTGCATATAAGGATCTTGATTTGTCAACCCTCACAATCCACACGCTTGCGTCACCAGTGTATGTGGATTTTGTCGCAAATTCAGATAATTTAGGTGTCATTCAAGTAAGTGTTGGTCCTTCTGACCTGAGCAGTGCTATAAGAATGAATGCTATATTGAATGGTGCAGAGATAATGAAGATGGTGAATGATGTAGATACAAATACTGTGCATAGGAGGAAGAAGTTGCGGGTGTTGGTGGGTTCCATTGTTGGAGGAATTGTTGTTTCACTTTTAGTGATAACTGCTTTTCTACTTGTTATTAAATGCAGGAACATGAAACCAAAACAGAAGACAGTGGACAGTGTTGGATGGACCACTTTGGGCATGTTTAGAGGGAGTTCCCTTAGTAGAACATCTGAACCTGGTTCTCATGGATATCTTGGCTTGAAGATCCCTTTTGCTGAAATCCAATCAGCAACAAACAATTTTGACAGAAATCTGATTATAGGGTCCGGTGGGTTTGGCATGGTATACAAGGGAGTGCTCAGAGACAATGTGAAGGTTGCTGTCAAGAGAGGCATGCCGGGGTCTAGACAAGGCCTTCCTGAATTCCAGACTGAAATAACCGTTTTGTCAAAAATTCGCCATTGCCACCTTGTTTCACTAGTTGGTTTTTGTGAAGAAAATTCAGAAATGATACTTGTGTATGAGTATGTGGAAAAAGGTCCACTGAAGAGGCATTTGTATGGTTCAGCACTACAACCACCTCTATCATGGAAGCAGCGTCTTGAAATATGCATTGGTGCAGCTAGAGGTCTTCACTATCTTCACACTGGTTTTGCTCAAGGAATCATCCACCGTGACATTAAATCAACTAACATATTGCTTGATGAAAACTATGTGGCCAAAGTTGCTGACTTTGGTCTTTCAAGGTCCGGGCCATGTATCAATGAAACACATGTGAGCACTGGTGTGAAAGGTAGTTTTGGTTATCTTGATCCTGAGTATTACAGGAGGCAACAACTTACAGATAAATCAGATGTTTATTCATTTGGAGTTGTGCTTTTTGAGGTTCTTTGTGGTAGACCTGCTGTTGATCCACATCTCACTAGAGAACAGGTGAATTTGGCAGAATGGGCACTTGAATGGCTGAATAAGGGAATGCTGGAGCATATTGTTGACCCTCATCTTGTTGGACAGACCAATCAAAGCTCATTGAAAAAATTTTGTGAAACTGCAGAGAAATGTGTGGCTGAGTATAGTGTTGATAGGCCAACGATGGGTGATGTCTTGTGGAATTTGGAATATGCACTTCAACTTCAAGAAAGTGGACAACAAAGGGAGCCACGTGCTGATAGTAGTAGTAGTGAAGCTGTGAGTATGACAACTACATTTATTCATGGAAATCCTTCTACCAACGGAAGAGCAAAGAGGGATTATGATATTGGTTCTTCAGACATAAGTACTAGCCAAGTGTTTTCCCAGTTAATGAACAATGAAGGCAGATAG 2472 0.4155 MDTQNLIIPLVFLFFIPSLVSFTPTDNYLLSCGTHSNVSLFNRVFMSDSNNPGSTFLSADNTISLTYQKPPQNLPTLYRTARVFRSTGRYTFNMKKNGTHLVRFHFSPFKAQTFDLKSAKFSVFLNGISVMRNFQPPSDVLLKEFILKIESNSLEILFRPVGNSGFAYVNAVEVFTAPVDFVIDFGARLVGASGVEEYRNLSSQVLETIHRINVGGLKITPFNDTLWRTWIPDEDYLVFKGAAKPAVSTNTPNYQKGGASREIAPENVYMTAQQMNRGNSSLASRFNITWNFPVSPGGVPHLVRLHFCDIVSPALNLLYFDVYINGYIAYKDLDLSTLTIHTLASPVYVDFVANSDNLGVIQVSVGPSDLSSAIRMNAILNGAEIMKMVNDVDTNTVHRRKKLRVLVGSIVGGIVVSLLVITAFLLVIKCRNMKPKQKTVDSVGWTTLGMFRGSSLSRTSEPGSHGYLGLKIPFAEIQSATNNFDRNLIIGSGGFGMVYKGVLRDNVKVAVKRGMPGSRQGLPEFQTEITVLSKIRHCHLVSLVGFCEENSEMILVYEYVEKGPLKRHLYGSALQPPLSWKQRLEICIGAARGLHYLHTGFAQGIIHRDIKSTNILLDENYVAKVADFGLSRSGPCINETHVSTGVKGSFGYLDPEYYRRQQLTDKSDVYSFGVVLFEVLCGRPAVDPHLTREQVNLAEWALEWLNKGMLEHIVDPHLVGQTNQSSLKKFCETAEKCVAEYSVDRPTMGDVLWNLEYALQLQESGQQREPRADSSSSEAVSMTTTFIHGNPSTNGRAKRDYDIGSSDISTSQVFSQLMNNEGR* 824
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g2163 823 CDD STKc_IRAK 490 756 - -
Apr8g2163 823 Gene3D Transferase(Phosphotransferase) domain 1 560 782 - -
Apr8g2163 823 Gene3D Phosphorylase Kinase; domain 1 455 559 - -
Apr8g2163 823 MobiDBLite consensus disorder prediction 764 792 - -
Apr8g2163 823 Pfam Malectin-like domain 30 388 IPR024788 -
Apr8g2163 823 ProSitePatterns Protein kinases ATP-binding region signature. 490 512 IPR017441 GO:0005524
Apr8g2163 823 SMART serkin_6 484 758 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g2163 823 ProSitePatterns Serine/Threonine protein kinases active-site signature. 605 617 IPR008271 GO:0004672|GO:0006468
Apr8g2163 823 MobiDBLite consensus disorder prediction 764 804 - -
Apr8g2163 823 ProSiteProfiles Protein kinase domain profile. 484 758 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g2163 823 PANTHER OS07G0166700 PROTEIN 15 767 IPR045272 GO:0004714|GO:0006468
Apr8g2163 823 Gene3D - 27 180 - -
Apr8g2163 823 Gene3D - 205 390 - -
Apr8g2163 823 SUPERFAMILY Protein kinase-like (PK-like) 471 753 IPR011009 -
Apr8g2163 823 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 15 767 - -
Apr8g2163 823 Pfam Protein tyrosine and serine/threonine kinase 489 752 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g2163 Apr-Chr8 32186435 32189658 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g2163 22 823 Receptor kinase-like Gene Family AT3G46290 48.175 0.0 715
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Apr8g2163 Malectin_like 1e-31 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g2163 - - gmx:100801169 1417.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g0661 6 9660740 9663751 Apr8g2163 8 32186435 32189658 PCT