Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g2160 ATGCAACCTCTCTTTTTGAAGCATCACACCAACCTCTCTCACTCGCTCCTACTCACAAAAGCAGGACCACAGACACAAACATCAGAAAACACTCTTTGCCTCTCTTCTTCCACCCGAAGCTATTTAGCTCCACCGATCTCCATGGCGGCAGGACTCTCCACCGCCAGCAACTTAAAGCCCTACAGTCTCCTCCAACCTTCAATTCCTCTCCCTAAGCCGACCCCATCACTGCTCTTCAACCCCTTAAGAGGTTTCCATCACACCACAATCCTTCGAACCCTAAGAAGAACGAGTGCCTTCACCCTTTGTGTCCTTATGGAGGATCCTAAACGCAATTTGCAGATCAAAACGGAGGAAGAACAAGAATCCCCCAAACTCGTGATTCCTCAAGTTGTTTCAGCACATTTGGCAGAGAAATTGGCCAGGAAGAGGTCTGAAAGGTTCACTTATCTCGTTGCAGCTGTGATGTCTAGCTTTGGTGTCACTTCCATGGCAGTTTTCGCCGTTTATTATAGATTCGCATGGCAAATGGAGGGTGGAGAAGTTCCTTGGTCTGAAATGTTTGGCACATTTTCTCTCTCCGTGGGTGCTGCTGTGGGTATGGAGTTTTGGGCAAGATGGGCTCACAGAGCTCTTTGGCATGCTTCCTTGTGGCACATGCACGAGTCTCACCATCGAGCAAGGGAAGGGCCATTCGAGCTTAACGACGCTTTTGCAATAATTAACGCAGTCCCTGCCATCGCTCTTCTCTCATACGGTTTCTTCAACAAGGGACTGGTCCCTGGCCTCTGTTTTGGTGCAGGTCTTGGGATCACAGTTTTTGGGATGGCCTACATGTTTGTCCACGATGGATTAGTTCACAAGAGATTCCCTGTGGGTCCCATTGCCAACGTGCCCTACTTCAGAAGAGTCGCTGCAGCTCACCAGCTCCACCATTCGGACAAATTCAATGGGGTGCCATATGGGCTGTTTTTAGGACCAAAGGAAGTTGAAAAAGTGGGAGGGCTAGCAGAGCTAGAGAAAGAGATACGTAGGAGAAAAAAATCGGGATCATGA 1056 0.4896 MQPLFLKHHTNLSHSLLLTKAGPQTQTSENTLCLSSSTRSYLAPPISMAAGLSTASNLKPYSLLQPSIPLPKPTPSLLFNPLRGFHHTTILRTLRRTSAFTLCVLMEDPKRNLQIKTEEEQESPKLVIPQVVSAHLAEKLARKRSERFTYLVAAVMSSFGVTSMAVFAVYYRFAWQMEGGEVPWSEMFGTFSLSVGAAVGMEFWARWAHRALWHASLWHMHESHHRAREGPFELNDAFAIINAVPAIALLSYGFFNKGLVPGLCFGAGLGITVFGMAYMFVHDGLVHKRFPVGPIANVPYFRRVAAAHQLHHSDKFNGVPYGLFLGPKEVEKVGGLAELEKEIRRRKKSGS* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g2160 351 Pfam Fatty acid hydroxylase 197 324 IPR006694 GO:0005506|GO:0008610|GO:0016491
Apr8g2160 351 PANTHER BETA-CAROTENE HYDROXYLASE 53 348 - -
Apr8g2160 351 PANTHER BETA-CAROTENE 3-HYDROXYLASE 1, CHLOROPLASTIC 53 348 IPR045019 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g2160 Apr-Chr8 32170105 32172471 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g2160 48 267 Chloroplast and Mitochondria Gene Families AT4G25700 60.699 2.52e-87 261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g2160 K15746 - gmx:100802778 508.449
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g0656 6 9565325 9568452 Apr8g2160 8 32170105 32172471 PCT