Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g2152 ATGGCTGAGGATTGGGATCTCTTTGCCATCGTGCGAAGTTGCCTATCAGCCACCAATACTGCCACCGTAGAAATTCCACAAACCACCACCAATACCATATCACTTACAGACACTTCCTCTTCCTTGGTCACTTCCACTGTCAACGAAGAATATGACGTATTTTCTTTTCCCAATATAGTGCAACCTATAACCAATGAGTTTCAAGAGCTTCACCAATTGTTCACACCCGTTAACCCCACCACTTCCACTAGTGCTCCTGGTATCAATCCCAATTCCCCTGATTTTGCAGAACATGAAAGGAAGCAGCGTGACCCTTTTCCTGTGCTTGCTCCTCCTACTCACACCTCAATTTGGCCTCATTTTGTGCCAGAACTCTCCACTTCAAGTTTCAACAAATTCCATGACCAACAACAACCACAGAAACAACTGCAAGTAGTTCAGACACAGAAATTTCAAGTACCCCAGAGCAATTCTCCTATTGTTTCACCAAGCACACAACCTCAAACACCCAGATCAAGAAAAAGAAAAAGCCAACAGAAGAAAATGGTGTGTCATGTAACCGCAGATAACCTCTCAGCAGATTTGTGGGCCTGGCGAAAATACGGACAAAAACCAATAAAGGGTTCTCCATATCCAAGGAACTACTATAGGTGCAGCAGCTCCAAAGGTTGTGCGGCGCGAAAGCAAGTTGAACGGAGTAACACTGAAACCGACATGTTCATCGTGACGTACACCGGAGACCACACGCATCCCAGACCCACCCACCGAAACTCGCTCGCCGGAAGTACCCGGAGTAAGACTCCGACGACGAATCCACCACCGTCACCCACGTCCTTCTCCTTTCAAGTCAACCCGTTTTCTTCTTCTTCTTCACCATCACACTCTCCGACCACGACTTCGGAAGACCCACCGGAAACAGGCGTGGCTGAAGCGGAAGTGGAACCCGAGCCGGAAATAGAAACCGAAGAGGACGACGAAGTTGACCGTGACGTTCGGTAA 999 0.4805 MAEDWDLFAIVRSCLSATNTATVEIPQTTTNTISLTDTSSSLVTSTVNEEYDVFSFPNIVQPITNEFQELHQLFTPVNPTTSTSAPGINPNSPDFAEHERKQRDPFPVLAPPTHTSIWPHFVPELSTSSFNKFHDQQQPQKQLQVVQTQKFQVPQSNSPIVSPSTQPQTPRSRKRKSQQKKMVCHVTADNLSADLWAWRKYGQKPIKGSPYPRNYYRCSSSKGCAARKQVERSNTETDMFIVTYTGDHTHPRPTHRNSLAGSTRSKTPTTNPPPSPTSFSFQVNPFSSSSSPSHSPTTTSEDPPETGVAEAEVEPEPEIETEEDDEVDRDVR* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g2152 332 SUPERFAMILY WRKY DNA-binding domain 187 253 IPR036576 GO:0003700|GO:0006355|GO:0043565
Apr8g2152 332 Gene3D WRKY domain 175 246 IPR036576 GO:0003700|GO:0006355|GO:0043565
Apr8g2152 332 Pfam WRKY DNA -binding domain 194 251 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr8g2152 332 MobiDBLite consensus disorder prediction 132 183 - -
Apr8g2152 332 SMART WRKY_cls 192 252 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr8g2152 332 MobiDBLite consensus disorder prediction 78 101 - -
Apr8g2152 332 PANTHER WRKY TRANSCRIPTION FACTOR 27-RELATED 3 325 - -
Apr8g2152 332 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 3 325 IPR044810 GO:0003700
Apr8g2152 332 MobiDBLite consensus disorder prediction 209 332 - -
Apr8g2152 332 MobiDBLite consensus disorder prediction 280 304 - -
Apr8g2152 332 ProSiteProfiles WRKY domain profile. 187 253 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr8g2152 332 MobiDBLite consensus disorder prediction 307 332 - -
Apr8g2152 332 MobiDBLite consensus disorder prediction 132 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g2152 Apr-Chr8 32116963 32118191 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g2152 171 276 WRKY Transcription Factor Family AT5G52830 80.189 5.38e-59 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Apr8g2152 WRKY 1.5e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g2152 - K13425 aprc:113871802 513.072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g0635 6 9316442 9317982 Apr8g2152 8 32116963 32118191 PCT