Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g2148 ATGGCAGAACAATCACCATCCACACCTCCACCACCCCTTAAAACCTACAAACTAACAGCAACTTCAATCTCTTACACCAAATCCACCAACACACTCTTCAAACACTGCACCACAACCCCACCAACCTACATCCTCAAAGACGTTTCTCTCACCGCTTACCCTTCTCAAATCCTCGCCATTGTTGGCCCAAGTGGCGCTGGAAAATCCACTCTTCTGGACATTCTCTCTGCTCGAACACTTCCTTCTAACGGCACTCTCTCTCTCAACTCTTCCCCTCTCAATCCCTCCACATTCCGCAAACTCTCTTCCTACGTCCCTCAACACGATGCATGCCTTCCTTTGCTCACTGTCTCCGAAACTTTCTTCTTCGCCGCGTGTCTTCTTATGCCTAAAACACCCAACATTGCTAACATTGTTTCTTCTCTTCTTACTCAACTGAGACTCACGCATTTGGCTAACACTAGGCTCGCTCATGGCTTATCTGGTGGAGAACGTAGAAGGGTCTCTATTGGCCTTAGTCTTCTTCATGATCCTGCTGTTTTGCTCCTTGATGAACCCACTTCTGGCCTTGATAGCACTTCTGCTTTCAAAGTCATGCAGATTCTTAAATCCACTTGCGTTTCTCGTAATAGGACTATTGTGTTGTCTATTCACCAACCCAGCTTCAAGATCCTCTCTTGCATTGATAGTATCTTGTTGCTTTCTAAAGGGAGTGTGGTTCATCATGGAAGTCTTGCTTCTCTTCAAGCGTTTTTGCACTCCAGTGGTTTCACTGTCCCTCATCAACTCAATGCATTGGAATATGCTATGGAAATATTGAACCGGTTGAGTGAGGTTAAACCCGTTACTCCCCCGAGTCTTCCTGAATCACCTGAAAGTTCAACGAGTTTTGTTTCTGATCATGGAAGTAAGAGCAGGGAGATCAGGTACAAAAGCTCTAGGATCCATGAAATTTGTACTCTCTATAGCAGGTTTTGGAAGATAATTTACAGAACTAGGCAATTGCTTTTGACTAACACGGTGGAAGCACTTCTTGTGGGTCTTGTGTTAGGCACTATTTATATCAACATCGGATTTGATAAGGAAGGCATTGAGAAAAGGTTTGGTCTCTTTGCCTTCACTCTCACATTCCTCTTATCCTCTACAACTGAGACCCTTCCCATCTTCATCAACGAGAGACCAATCTTGTTGAGAGAAACTTCGAGTGGCGTTTATAGGCTATCATCTTATCTCATTGCAAATACACTTGTTTTCTTGCCATATTTGTTGGTAGTTGCTGTTATATACTCAATCCCAGTCTATTTCTTAGTGGGTCTTTGTGCGTCTTGGGTTTCTTTTGCTTATTTTGTTTTGGTCATTTGGGTCATAGTTCTAATGGCAAACTCGTTTGTGCTCTTCTTGAGCTCTCTTGCCCCAAACTACATATCTGGGACTTCACTCTTGACGGTGCTTCTTGCAGCGTTTTTTCTCTTCTCTGGCTATTTTATCTCCAAGGATTCATTGCCCAAGTACTGGCTCTTCATGCACTTCTTGTCTATGTACAAATACGCTCTTGATGCTCTTCTTATCAACGAGTACTCTTGCTTGGTAACGAGGTGTTTTATATGGTACCAAGAGAATGAAGACTGCATGGTCACCGGAGGTGACGTGCTACGCAATAGAGGCCTCCAAGAGAGTGAAAGATGGACCAACGTGTACATCTTGATCGGATTCTTTGTGTTGTATCGTGTGCTTTGCTTCTTGGTTTTGCTTAGGAGGGTTTCAAGATCCAAAACTTGA 1779 0.4368 MAEQSPSTPPPPLKTYKLTATSISYTKSTNTLFKHCTTTPPTYILKDVSLTAYPSQILAIVGPSGAGKSTLLDILSARTLPSNGTLSLNSSPLNPSTFRKLSSYVPQHDACLPLLTVSETFFFAACLLMPKTPNIANIVSSLLTQLRLTHLANTRLAHGLSGGERRRVSIGLSLLHDPAVLLLDEPTSGLDSTSAFKVMQILKSTCVSRNRTIVLSIHQPSFKILSCIDSILLLSKGSVVHHGSLASLQAFLHSSGFTVPHQLNALEYAMEILNRLSEVKPVTPPSLPESPESSTSFVSDHGSKSREIRYKSSRIHEICTLYSRFWKIIYRTRQLLLTNTVEALLVGLVLGTIYINIGFDKEGIEKRFGLFAFTLTFLLSSTTETLPIFINERPILLRETSSGVYRLSSYLIANTLVFLPYLLVVAVIYSIPVYFLVGLCASWVSFAYFVLVIWVIVLMANSFVLFLSSLAPNYISGTSLLTVLLAAFFLFSGYFISKDSLPKYWLFMHFLSMYKYALDALLINEYSCLVTRCFIWYQENEDCMVTGGDVLRNRGLQESERWTNVYILIGFFVLYRVLCFLVLLRRVSRSKT* 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g2148 592 PANTHER ABC TRANSPORTER G FAMILY MEMBER 8 6 587 - -
Apr8g2148 592 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 6 587 - -
Apr8g2148 592 Gene3D - 24 256 IPR027417 -
Apr8g2148 592 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 39 252 IPR027417 -
Apr8g2148 592 SMART AAA_5 54 238 IPR003593 -
Apr8g2148 592 ProSitePatterns ABC transporters family signature. 160 174 IPR017871 GO:0005524
Apr8g2148 592 Pfam ABC transporter 45 188 IPR003439 GO:0005524
Apr8g2148 592 Pfam ABC-2 type transporter 317 526 IPR013525 GO:0016020|GO:0140359
Apr8g2148 592 Pfam ABC-2 type transporter 218 278 IPR043926 GO:0140359
Apr8g2148 592 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 26 261 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g2148 Apr-Chr8 32088822 32090600 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g2148 38 255 Calmodulin-binding Proteins AT2G36910 27.917 5.58e-18 86.3