Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g2141 ATGGATGGAGACATCACCGTATGGGCCTCAAACACTTCAGGTGCTGATGTACAAACAGCAATCATGTCGGAAACTGGCAACTTCATTCTTCATAACACCAACAACCACCCTGTGTGGCAGAGTTTTTCTCAACCTTCTGATACTCTCCTCCCTAACCAGCTTCTAACAGTTTCTTCAGAACTAACATCATCAAAGTCTTCGTCTCATGGTGGCTACTATGCTCTGAAAATGCTTCAACAACCTACTTCTTTAAGCCTTGCTCTTACTTACAATCTGCCAGAAACTTTCCAGGCTTCAGATGAATCATACACTAACTATTCCTATTGGCAAGGTCCTGATATCTCCAATGTGACTGGCCAAGTTATAGCTGTTTTAGATCAAGCTGGAAGCTTTGGAATTGTGTATGGAGACTCATCTGATGGAGCAGTTTATGTGTTCAAGAATGATGATGATGATGCAGGCTTGTCTTCTGCAGTTCATCAATCTGCACCATTAACTGTTCTTAGGAGATTGACACTGGAAAAGAATGGTAATCTGAGATTGTATATTTGGGATGAAGTGAATGGTTCAAGCAAGTGGGTGCCGCAGTGGGCTGCAGTTTCAAATCCTTGTGATATTGCTGGGATTTGTGGCAACGGAGTTTGTAATTTAGATAGAAGTAAGACAAAAGCCTCATGCACATGTTTGCCAGGAACTTCTAAAGTTGGCAGGGATGGGCAGTGCTATGAGAATTCAACTCTTGTTGGAAAATGCAATGGGCAGCATGAAATCATGACATCCCAGTTCAGGATTTCAGTGGCGCAGCAAACGAACTATTATTTTTCTGAATTTTCAGTAATAGCTAACTATACTGATATTTCTAATGTATCGAAATGTGGGGATGCTTGCTTATCAGATTGTGATTGTGTTGCTTCTGTTTATGGGCTAAATGAGGAGAGACCATATTGCTGGGTGTTGAGGAGTTTAAGTTTTGGTGGTTTTGAGGATACCAGTTCAACTTTGTTTGTGAAGGTTAAAGCAAATGGTTCATGGACACCAGAAGGCCAAGCACGAAAGTCTAATAGCTCTTCTGATGGAATGGGAAGTGCAAAGGAGAAGGCTGTGATTATTCCCACTGTTATGAGCATGGTAGTTCTCATTGTTTTGCTGTGCTTATTACTGTATTACAGCGTTCACAGAAAGAGAGTTTTAAAAAGAGAAATGGAAAGTTCCTTGATCTTATCAGGTGCTCCAATGAATTTCACCTACCGTGATTTGCAAATTAGGACGTGTAACTTTTCTCAGCTGCTAGGAACAGGTGGATTTGGGAGTGTGTATAAAGGAAGCCTGGGAGATGGTACCTTAGTTGCAGTGAAGAAACTTGAAAGGGTTTTGCCTCATGGTGAGAAGGAATTTATCACTGAAGTAAACACCATTGGCTCAATGCATCATATGAATTTGGTTCGCCTATGTGGCTATTGTTCAGAGGGATCACACAGGCTTCTTGTTTATGAGTTCATGAAGAACGGTTCCTTGGATAAATGGATCTTCCCTTCATATCAAGGAAGAGATAGATTGCTAGATTGGACAACTCGCTTCAATATAGCCATAGCTACTGCACAAGGGATTGCATACTTTCATGAGCAGTGCAGAAATCGGATAATACATTGTGACATCAAACCAGAAAACATATTGTTGGATGAAAACTTTTGTCCTAAAGTATCAGATTTTGGACTAGCCAAATTGATGGGAAGGGAGCACTCTCATGTGGTAACAATGGTTAGAGGCACTAGAGGCTATTTGGCACCAGAATGGGTTAGTAATCGCCCTATAACTGTAAAAGCCGATGTTTACAGCTATGGGATGCTTCTTTTAGAGATCATTGGTGGCAGGAGAAACCTTGATATTTCCTTTGATGCAGAGGACTTCTTCTATCCTGGTTGGGCTTACAAGGAGATAACAAATGGTTCGCCAATCAAAGTGGCAGATGGAAGATTAAATGGGGCAGTTGATGAAGAAGAGTTAATGAGAGCTCTGAAAGTTGCATTTTGGTGCATCCAAGATGAGGTATTCATGCGTCCTACAATGGGGGAAGTGGTGAGGATGCTGGAAGACTCAATTAACATTAATATGCCACCAATGCCGCAAACAGTAATAGAGTTAATTGAAGAAGGCTTAGACAACGTATACAAAGCTATGAAAAGAGAGTATAACCAGTCCAGCTCATTCACCCTTACCAGCCATCTTACATCTCATGCCACATGCAGCAATTCCACGATGTCACCAAGATAA 2271 0.413 MDGDITVWASNTSGADVQTAIMSETGNFILHNTNNHPVWQSFSQPSDTLLPNQLLTVSSELTSSKSSSHGGYYALKMLQQPTSLSLALTYNLPETFQASDESYTNYSYWQGPDISNVTGQVIAVLDQAGSFGIVYGDSSDGAVYVFKNDDDDAGLSSAVHQSAPLTVLRRLTLEKNGNLRLYIWDEVNGSSKWVPQWAAVSNPCDIAGICGNGVCNLDRSKTKASCTCLPGTSKVGRDGQCYENSTLVGKCNGQHEIMTSQFRISVAQQTNYYFSEFSVIANYTDISNVSKCGDACLSDCDCVASVYGLNEERPYCWVLRSLSFGGFEDTSSTLFVKVKANGSWTPEGQARKSNSSSDGMGSAKEKAVIIPTVMSMVVLIVLLCLLLYYSVHRKRVLKREMESSLILSGAPMNFTYRDLQIRTCNFSQLLGTGGFGSVYKGSLGDGTLVAVKKLERVLPHGEKEFITEVNTIGSMHHMNLVRLCGYCSEGSHRLLVYEFMKNGSLDKWIFPSYQGRDRLLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSHVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIIGGRRNLDISFDAEDFFYPGWAYKEITNGSPIKVADGRLNGAVDEEELMRALKVAFWCIQDEVFMRPTMGEVVRMLEDSININMPPMPQTVIELIEEGLDNVYKAMKREYNQSSSFTLTSHLTSHATCSNSTMSPR* 757
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g2141 756 Gene3D Phosphorylase Kinase; domain 1 388 499 - -
Apr8g2141 756 Gene3D - 1 77 IPR036426 -
Apr8g2141 756 Gene3D Transferase(Phosphotransferase) domain 1 500 713 - -
Apr8g2141 756 PIRSF SRK 1 751 IPR024171 GO:0004674
Apr8g2141 756 ProSitePatterns Protein kinases ATP-binding region signature. 430 453 IPR017441 GO:0005524
Apr8g2141 756 Pfam D-mannose binding lectin 6 60 IPR001480 -
Apr8g2141 756 ProSitePatterns Serine/Threonine protein kinases active-site signature. 547 559 IPR008271 GO:0004672|GO:0006468
Apr8g2141 756 PANTHER OS07G0415500 PROTEIN 1 756 - -
Apr8g2141 756 SUPERFAMILY Protein kinase-like (PK-like) 402 696 IPR011009 -
Apr8g2141 756 ProSiteProfiles Bulb-type lectin domain profile. 1 43 IPR001480 -
Apr8g2141 756 SUPERFAMILY alpha-D-mannose-specific plant lectins 2 59 IPR036426 -
Apr8g2141 756 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE PLANT 1 756 - -
Apr8g2141 756 ProSiteProfiles Protein kinase domain profile. 424 700 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g2141 756 CDD STKc_IRAK 430 697 - -
Apr8g2141 756 SMART serkin_6 424 700 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g2141 756 Pfam S-locus glycoprotein domain 144 231 IPR000858 GO:0048544
Apr8g2141 756 Pfam Protein kinase domain 427 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g2141 Apr-Chr8 32021443 32025631 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g2141 378 706 Receptor kinase-like Gene Family AT5G20050 43.258 2.18e-80 263
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Apr8g2141 Pkinase 2.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g2141 - - gmx:100794281 1401.34