Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g2133 ATGGCAGGCTTTTGGAGTGTATTTTGTGGGGAATTTAGTTGTTCAGAGGATGGAAGAAAACCCTGTAGATATGATTTTAAGTTTCTTATTGATCCTTCTACTTGTATCAACCATTTGTTAATCTCCTGCTTTGATGTGTTGATGCTTGTCATGCTCTTATTTATTATGATCCAGAAATCAACATTAAAACCATGTCATGGTCTATCACGGGTGCGAAGACATTCATATTTGCAGCTAGTTTCTGCTATAGCCAATGGTGCTTTTGGATTGGTGCATTTGTGTTTAGGCATTTGGGTCTTAGAGGAGAAGTTGAGGAAAACCCAAACTGCATTGCCCCTTAACTGGTGGTTGCTAGAAATCTTTCATGGATTGACATGGTTGCTAGTGGGTTTAACAATAAGCCTGAAGTTGAAACAACTTCCAAGAGCATGGTCAAGGATTTTTTCTATTCTATTCTTCTTGGTTTCTGGTATTTCTTGTGCATTATCCTTGTTTTATACAATTAGTAGCAGAGAACTGTCGCTTAAGATAGCTTTAGATGTTATATCTTTTCCAGGGGCAGTATTTTTGCTATTATTCACATATAAGGAAACCGTGTGTAAGAACACTGACAGAGAAGTTGATGAAAGCCTTTATGCCCCTTTAAATGGTGACAACAATAAAAATGGTTCTGTTGATTATGTAACCCTATTTGCCAAAGCTGGATTCTTTAACAGAATGTCATTTTGGTGGTTGAATCCATTGATGAAAAAAGGTAAACAGAAAACACTTCAGGATGAAGACATCCCAAGGTTACGCGAGGAGGATCGAACAGAAAATTGTTATTTGTTGTTTTTGGACCAATTGAACAGACAAAAACAGAAAGATCCATCCTCACAGGCATCAGTTTTGAGGACAATAATTTTATGCCATTGGAAAGAAATTTTAGTATCAGGATTCTTTGCAATGCTTAAGGTTCTTGCTTTGTCTTCTGGACCTTTGCTTCTAAATTCTTTTATATTGGTTGCAGAGGGTAATGGAAGTTTCAAATATGAAGGTTTTGTGTTGGCCATATCACTTTTCTTTACAAAAACCATAGAATCCCTATCACAAAGGCAGTGGTACTTCCGCTCTAGACTTATTGGTTTGAAAGTTAGATCGTTGCTAACTGCAGCAATTTATAAAAAGCAACTAAGATTATCCAATTCTGCTAGATTGATGCACTCTGGTGGTGAGATAATGAATTATGTGACCGTGGATGCTTATAGAATTGGTGAATTTCCCTATTGGTTTCACCAAACTTGGACAACTAGCTTCCAGCTGTGTATCTCATTAGTAGTACTTTTCCGTGCTGTTGGGCTAGCTACACTTGCCTCCTTGGTGGTGATAATAATCACAGTGCTTTGCAATACTCCACTGGCAAAGTTACAACACAAGTTTCAAAGCAAACTTATGGGGGCACAAGATGAGAGATTGAAGGCTTGTTCTGAAGCTCTCGTCAATATGAAGGTGTTGAAGTTGTATGCGTGGGAAACCAATTTTAGGAATGCTATAGAAAGATTAAGAAATGTAGAGCTCAAATGGTTGTCTGCAGTGCAACTAAGAAAGGCATACAACAGCTTTCTCTTTTGGTGCTCCCCTGTTTTGGTCTCTGCTGCAACTTTTGGGGCATGTTACTTTCTCAATGTTCCTTTACATGCAAATAATGTTTTCACTTTTGTGGCAACTTTGCGCCTTGTTCAAGATCCAGTTAGAACCATCCCTGATGTTATTGGGATGGTTATTCAGGCCAAAGTTGCATTTTCCCGAATTGTAAAATTCCTGGAGGCACCTGAGCTGCAGAGTGCAAATGTCAGAAAAAGATGCCCTAATGAAAATATGAAGGGTTCAATTGTAATAAAGTCTTCTGACTTTTCATGGGAAGAGAATGGATCAAAGTCAACCCTGAGAAACATAAATTTGGATGTTAGACCTGGGCAAAAGGTGGCTATTTGTGGAGAGGTTGGCTCAGGCAAATCAACGCTCTTAGCAGCAATTCTCAGAGAAGTTCCTAATACTTGTGGGACAATTGAAGTTTACGGGAAGTTTGCCTATGTTTCTCAAACAGCATGGATACCGACAGGTACAATTCGGGAGAATATATTGTTTGGAAAAAGTATGGATGCTGAAAAGTATCAAGAAACGCTTCATAGGTCATCATTGGTGAAGGACCTTGAGTTGTTTCCCTACGGTGATCTCACGGAAATAGGGGAGAGAGGGGTTAACCTGAGTGGAGGTCAGAAGCAGCGAATTCAACTTGCCCGTGCACTTTATCAAAATGCTGATATATATCTCTTGGATGATCCATTTAGTGCTGTTGATGCGCATACTGCAACAAATTTGTTTAATGAATACATAATGGAAGGACTTGCTGGCAAGACAGTCTTGCTCGTGACTCATCAAGTTGATTTCCTTCCAGCATTTGATTCTGTTTTGTTAATGTCAGATGGAGAAATCATACAATCTGCTTCTTATCACCATTTGTTGAGCACAAGCCAAGAATTTCAGGACCTTGTGAACGCCCACAAAGAAACTGCTGGTTCTGACCGGCTTGTGGATGTTACTTCTTCCCAGAGACATTTAAATAGTTCCAGAGAAATTCGGAAAACACATGTGGAAAAGCATTCAGAAGCATCAAAAGGTGATCAATTGATTAAGGAAGAAGAGAGAGAGAAAGGAGATCAAGGGTTCAAACCTTACTTACAATATCTAAATCAGAACAAAGGATATATATACTTCTCTGTGGCTGCTCTGTCTCATCTTACATTTGTGGTTGGCCAAATATTGCAGAACTCATGGATGGCTGCTAATGTTGACAATCCTCGAATCAGCACTTTGGAGTTGATTCTAGTTTACTTGATCATTGGAGTTATTTCATTAATATTCTTGTTGACGAGAAGTCTTGTTACAGTTGCTTTGGGTATTCAATCATCAAAATCTCTTTTTTTACAACTGCTGAACTCCCTTTTTTGTGCCCCGATGTCATTTTATGACTCCACTCCTTTAGGACGGATACTCAGTAGGGTCTCCTCAGATGTCAGCATTGTGGACCTTGATGTTCCATTCAGCCTTGTTTTTGCTGTAGCAGCTACTACGACTTTTTTTGCCAATCTTACAGTTTTAGCAGTTGTTACTTGGCAAATCTTGTTTGTCTCCATACCAATGATTTGTTTCGCACTTCGCCTGCAGAGATATTACTTTGCCTCTGCAAAAGAACTGATGCGGATGAATGGCACAACAAAATCCTTTGTAGCTAACCATCTTGCTGAATCTGTTGCTGGAGCTGTGACAATAAGGGCTTTTGAAGAGGAAGATCGATTTTTTGTGAAAAATCTTGAGCTAATTGATGTCAATGCTAGTCCTTTCTTTCACAGTTTTGCAGCAAATGAGTGGTTGATTCAACGGTTAGAAGTAGTCAGTGCAGTTGTTCTTGCATCTACGGCACTTTGCATGGTTGTCCTTCCACCTGGAACTTTTGCTTCCGGATTTATTGGCATGGCTCTCTCTTACGGCCTTTCACTTAACATGTCCTTGGTAAATTCAATTCAAAATCAATGCTATATAACAAATTATATAATATCAGTGGAGAGGCTAAATCAATATATGCATATACCAAGTGAGGCCCCAGAAATAATAGAAGAAAAACGTCCTCCAGTGAATTGGCCGGTTGCTGGTAGAGTAGAAATAAATGAATTGCAGATACGTTACAGGCCAGATGCTCCACTTGTACTCCGTGGGATCACATGCACATTTGAAGGAGGGCACAAAATTGGTATTGTTGGCCGCACAGGCAGTGGGAAGTCCACTCTTATAGGTGCTTTATTCCGTCTAGTGGAGCCAGCAGGTGGAAGTATCATTGTTGATGGCATTGACATTTGCTCCATTGGACTCCATGATTTAAGATCACGTTTTGGTATTATACCTCAGGATCCTACTCTTTTTAATGGGACAGTCAGATACAATTTGGACCCCTTATCTCAATACTCTGATCAAGAGATATGGCAGGTTCTTGAGAAATGTCAGTTGCAAGAGGCTGTCCAAGAGAAAGAAGAGGGATTAGACTCTTCAGTTGTTGAAGCTGGAGCAAACTGGAGCATGGGACAACGACAGTTATTCTGTTTGGGGCGTGTTCTTTTGAGAAGAAGTCAGATATTGGTGCTTGATGAAGCAACTGCATCTATTGATAATGCAACTGATTTGATTCTACAGAAAACTATAAGGACTGAGTTTGCAGATTGTACTGTAATCACGGTCGCTCACAGGATACCAACTGTGATGGATAGTACTAAGGTTCTTGCCATCAGTGATGGAAAACTGGTGGAATATGATGAGCCAATGAACTTGATGAAGAGAGAAGGATCGTTGTTCGGGAAGCTTGTCAAGGAATACTGGTCCCATTTTCAGTCTGCAGAATTTCATTGA 4440 0.3975 MAGFWSVFCGEFSCSEDGRKPCRYDFKFLIDPSTCINHLLISCFDVLMLVMLLFIMIQKSTLKPCHGLSRVRRHSYLQLVSAIANGAFGLVHLCLGIWVLEEKLRKTQTALPLNWWLLEIFHGLTWLLVGLTISLKLKQLPRAWSRIFSILFFLVSGISCALSLFYTISSRELSLKIALDVISFPGAVFLLLFTYKETVCKNTDREVDESLYAPLNGDNNKNGSVDYVTLFAKAGFFNRMSFWWLNPLMKKGKQKTLQDEDIPRLREEDRTENCYLLFLDQLNRQKQKDPSSQASVLRTIILCHWKEILVSGFFAMLKVLALSSGPLLLNSFILVAEGNGSFKYEGFVLAISLFFTKTIESLSQRQWYFRSRLIGLKVRSLLTAAIYKKQLRLSNSARLMHSGGEIMNYVTVDAYRIGEFPYWFHQTWTTSFQLCISLVVLFRAVGLATLASLVVIIITVLCNTPLAKLQHKFQSKLMGAQDERLKACSEALVNMKVLKLYAWETNFRNAIERLRNVELKWLSAVQLRKAYNSFLFWCSPVLVSAATFGACYFLNVPLHANNVFTFVATLRLVQDPVRTIPDVIGMVIQAKVAFSRIVKFLEAPELQSANVRKRCPNENMKGSIVIKSSDFSWEENGSKSTLRNINLDVRPGQKVAICGEVGSGKSTLLAAILREVPNTCGTIEVYGKFAYVSQTAWIPTGTIRENILFGKSMDAEKYQETLHRSSLVKDLELFPYGDLTEIGERGVNLSGGQKQRIQLARALYQNADIYLLDDPFSAVDAHTATNLFNEYIMEGLAGKTVLLVTHQVDFLPAFDSVLLMSDGEIIQSASYHHLLSTSQEFQDLVNAHKETAGSDRLVDVTSSQRHLNSSREIRKTHVEKHSEASKGDQLIKEEEREKGDQGFKPYLQYLNQNKGYIYFSVAALSHLTFVVGQILQNSWMAANVDNPRISTLELILVYLIIGVISLIFLLTRSLVTVALGIQSSKSLFLQLLNSLFCAPMSFYDSTPLGRILSRVSSDVSIVDLDVPFSLVFAVAATTTFFANLTVLAVVTWQILFVSIPMICFALRLQRYYFASAKELMRMNGTTKSFVANHLAESVAGAVTIRAFEEEDRFFVKNLELIDVNASPFFHSFAANEWLIQRLEVVSAVVLASTALCMVVLPPGTFASGFIGMALSYGLSLNMSLVNSIQNQCYITNYIISVERLNQYMHIPSEAPEIIEEKRPPVNWPVAGRVEINELQIRYRPDAPLVLRGITCTFEGGHKIGIVGRTGSGKSTLIGALFRLVEPAGGSIIVDGIDICSIGLHDLRSRFGIIPQDPTLFNGTVRYNLDPLSQYSDQEIWQVLEKCQLQEAVQEKEEGLDSSVVEAGANWSMGQRQLFCLGRVLLRRSQILVLDEATASIDNATDLILQKTIRTEFADCTVITVAHRIPTVMDSTKVLAISDGKLVEYDEPMNLMKREGSLFGKLVKEYWSHFQSAEFH* 1480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g2133 1479 SMART AAA_5 1259 1444 IPR003593 -
Apr8g2133 1479 SMART AAA_5 651 824 IPR003593 -
Apr8g2133 1479 SUPERFAMILY ABC transporter transmembrane region 907 1213 IPR036640 GO:0005524|GO:0016021
Apr8g2133 1479 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 626 847 IPR003439 GO:0005524
Apr8g2133 1479 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 617 847 IPR027417 -
Apr8g2133 1479 CDD ABC_6TM_ABCC_D2 915 1208 IPR044726 GO:0140359
Apr8g2133 1479 Gene3D ABC transporter type 1, transmembrane domain 881 1214 IPR036640 GO:0005524|GO:0016021
Apr8g2133 1479 Gene3D ABC transporter type 1, transmembrane domain 280 606 IPR036640 GO:0005524|GO:0016021
Apr8g2133 1479 Pfam ABC transporter transmembrane region 309 576 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Apr8g2133 1479 Pfam ABC transporter transmembrane region 917 1156 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Apr8g2133 1479 PANTHER ABC TRANSPORTER C FAMILY PROTEIN 74 1479 - -
Apr8g2133 1479 CDD ABCC_MRP_domain1 624 824 - -
Apr8g2133 1479 Gene3D - 1216 1468 IPR027417 -
Apr8g2133 1479 Pfam ABC transporter 642 776 IPR003439 GO:0005524
Apr8g2133 1479 Pfam ABC transporter 1250 1398 IPR003439 GO:0005524
Apr8g2133 1479 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 74 1479 - -
Apr8g2133 1479 CDD ABCC_MRP_domain2 1231 1451 - -
Apr8g2133 1479 ProSitePatterns ABC transporters family signature. 749 763 IPR017871 GO:0005524
Apr8g2133 1479 MobiDBLite consensus disorder prediction 869 897 - -
Apr8g2133 1479 CDD ABC_6TM_ABCC_D1 310 597 IPR044746 GO:0140359
Apr8g2133 1479 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1235 1467 IPR003439 GO:0005524
Apr8g2133 1479 SUPERFAMILY ABC transporter transmembrane region 297 602 IPR036640 GO:0005524|GO:0016021
Apr8g2133 1479 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 309 589 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Apr8g2133 1479 Gene3D - 622 854 IPR027417 -
Apr8g2133 1479 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 927 1196 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Apr8g2133 1479 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1223 1460 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g2133 Apr-Chr8 31935167 31943251 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g2133 618 1474 Calmodulin-binding Proteins AT2G36910 24.258 2.04e-55 210
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g2133 K05666 - gmx:100811468 2543.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g0606 6 8718679 8725440 Apr8g2133 8 31935167 31943251 PCT