Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g2130 ATGTCTTATCACTCTCTTCTACTCTTATGGTTCCTTTTCTTTCTCTTCACCCACCCCTTACTTTCTCTCCCTTTCTTGCCTTCAGACAACGTCACACTCTATGGTGACGCTTTCTTCAGCAACAACGGTATCACTCTCACCAAAGAACAATCCACGTGCCCTTTCTCTTCTTCTTCATCATCATCAGGGATAGGAAGAGCTTTCTATGTCTACCCAGTTCGCTTTCTTGATCCTGAAACTAACTCCACTGTTTCTTTCTCAGGCCGTTTCTCTTTCTCAATCGTTTCATCATCTCCTTCTTGTTCTTCAGGTGATGGCATTGCCTTTCTCATAGCCTCAACTACCGAGTTTGCAACACTTTCTAAAGGTTACATGGGTCTTCCCTCACACGTTTTGGACAAAAAAGCTTCATACTTTGCTGTGGAATTTGACACCAGTTTGGACCCTTCACTTGGTGACCTTAATGGAAACCATGTTGGGATTGATGTTAACAGTGTCGTGTCTTTTGCTTCTGTGGATGCTTTGTCACGTGGGATTGACCTCAAGAGCGGGAAAATGATCACTGCTTGGGTAGAGTATAGGGATGCCATGAAGATGGTTCGTGTGTGGGTTGGTTATTCTTCAACTAGGCCTACAACTCCAATTCTTGCTTCACAAATTGACCTTTCTGAGAAGTTTAAGGATTTCATGCATGTTGGTTTTTCTGCCTCTAATGGGCAGGGTTCAGGTGTTCACCTTGTTCATCATTGGCAGTTTAAAACTTATGGGTATTCCCCTTCAGTGAGTCCTATTGACATGGTGGAAGAAGGAGACTGTTTCTTGTGTTATGCTGGGGATTCAAGAATGGCTCTTGGATTGGGAGGGTTAACATCATTTCTGGTGTCAGGTTTGATAGCTGCTGTGGCAGTGTGTGTTTTCTTGACAAAGAAAAAGGGTGGTTTAAGACAGATTAGGGACGGGCAAAGTTGTAGATTTCAGACAACTAAAGTGCCAACCAGATTGTCACTTTCAGAGATCAAATCAGCCACAATGGGGTTCAATCAAAATAGACTTGTTGGGGAAGGTGCATCAGCAAAGGTTTATAAAGGGTATCTTCCACTTGGAGGAGTTGTGGCAGTGAAGAGATTTGAGAGCGTTAATGATTTAGACTGTTTGCACAACCCTTTTGCAACTGAATTTGCAACAATGGTGGGTTACTTGAGGCACAAGAATTTGGTTCAGCTTAAGGGATGGTGCTGTGAGGGGAATGAGCTGGTCCTGGTTTATGAGTACTTGCCCAATGGGAGCCTCAATAAAGTTCTTCATAGAAACTTCAATTCTTCAGTTGTACTTTCATGGAAGCAAAGAGTTAACATAATTCTGGGGGTTGCTTCTGCTCTTACCTATCTTCATGAAGAATGTGAGAGGCAAATCATTCATAGAGATGTGAAGACTTGCAATATAATGCTTGATGCAGATTTCAATGCGAAGCTTGGGGATTTTGGACTTGCAGAAGTGTATGAACATAGTTGTAGCACAAGGGATGCTACTATACCTGCAGGAACAATGGGGTATCTTGCTCCTGAATATGTTTATTCTGGTGTTCCTACTGTAAAGACTGATGTGTATAGCTTTGGAGTAGTGGTGTTAGAAGTGGCAACGGGGAGGAAGCCTGTAGAAGATGATGGCACTGTGGTTGCTGATTATGTGTGGAACTTGTGGGAAAAAAACAAACTCATTGATGCTGCCGATCCAAGATTGAGTGGAAGGTTTGATGCACTTGAGATGGAAAGGATACTCCTGGTGGGGCTTGTTTGTGTGCACCCTGACTATGAGAAAAGACCCAGAGTAAGAGAAGCAGCTAGAATTCTTAAGAAGGAAGCCCCACCTCCAATGTTGCCTCCTAACAAACCAAGGGTGAGAATTAGGCCTATTTGTCCAAATGATACACCTGAAACACAAAATGTTGTTGGGGACTGGATCAGTACAGACGAGGGTCCATATATGACTCCTAGGAGCCAGTTTTACTAA 2010 0.4313 MSYHSLLLLWFLFFLFTHPLLSLPFLPSDNVTLYGDAFFSNNGITLTKEQSTCPFSSSSSSSGIGRAFYVYPVRFLDPETNSTVSFSGRFSFSIVSSSPSCSSGDGIAFLIASTTEFATLSKGYMGLPSHVLDKKASYFAVEFDTSLDPSLGDLNGNHVGIDVNSVVSFASVDALSRGIDLKSGKMITAWVEYRDAMKMVRVWVGYSSTRPTTPILASQIDLSEKFKDFMHVGFSASNGQGSGVHLVHHWQFKTYGYSPSVSPIDMVEEGDCFLCYAGDSRMALGLGGLTSFLVSGLIAAVAVCVFLTKKKGGLRQIRDGQSCRFQTTKVPTRLSLSEIKSATMGFNQNRLVGEGASAKVYKGYLPLGGVVAVKRFESVNDLDCLHNPFATEFATMVGYLRHKNLVQLKGWCCEGNELVLVYEYLPNGSLNKVLHRNFNSSVVLSWKQRVNIILGVASALTYLHEECERQIIHRDVKTCNIMLDADFNAKLGDFGLAEVYEHSCSTRDATIPAGTMGYLAPEYVYSGVPTVKTDVYSFGVVVLEVATGRKPVEDDGTVVADYVWNLWEKNKLIDAADPRLSGRFDALEMERILLVGLVCVHPDYEKRPRVREAARILKKEAPPPMLPPNKPRVRIRPICPNDTPETQNVVGDWISTDEGPYMTPRSQFY* 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g2130 669 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VIII.1 26 635 - -
Apr8g2130 669 Pfam Protein kinase domain 347 557 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g2130 669 SUPERFAMILY Concanavalin A-like lectins/glucanases 27 262 IPR013320 -
Apr8g2130 669 SUPERFAMILY Protein kinase-like (PK-like) 331 634 IPR011009 -
Apr8g2130 669 Pfam Legume lectin domain 28 259 IPR001220 GO:0030246
Apr8g2130 669 Gene3D Phosphorylase Kinase; domain 1 310 424 - -
Apr8g2130 669 ProSiteProfiles Protein kinase domain profile. 346 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g2130 669 CDD lectin_legume_LecRK_Arcelin_ConA 28 254 IPR001220 GO:0030246
Apr8g2130 669 ProSitePatterns Serine/Threonine protein kinases active-site signature. 471 483 IPR008271 GO:0004672|GO:0006468
Apr8g2130 669 ProSitePatterns Protein kinases ATP-binding region signature. 352 374 IPR017441 GO:0005524
Apr8g2130 669 Gene3D - 21 262 - -
Apr8g2130 669 CDD STKc_IRAK 352 619 - -
Apr8g2130 669 PANTHER - 26 635 - -
Apr8g2130 669 Gene3D Transferase(Phosphotransferase) domain 1 425 622 - -
Apr8g2130 669 SMART serkin_6 346 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g2130 Apr-Chr8 31909330 31911390 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g2130 1 668 Receptor kinase-like Gene Family AT5G42120 54.714 0.0 721
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Apr8g2130 Pkinase 1.5e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g2130 - - gmx:100783805 1029.24