Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g2124 ATGAGCCTTGCTATCACCAAAGGCAACGGGGAGACAAAGGCCAATTTGGCTGAAATAATTACTCACTACGTGGGGACACTCAATCAAAACAAATTGCATTTTCTGGGTTATCCGACTAATCTGGACTTCGACTATGATGCACTGAAACCCTTGTTGCATTTTCACCTAAATAATGCTGGTGATCCATTTATACGGAGCAGTTTTAGTCTAAATTCAACAGAATTTGAAGTTTGCGTGCTTGATTGGTTTGCCAACCTATGGAAGATAAATAGGGATGAGTATTGGGGATATGTCACAACTGGTGGAACTGAAGGAAATCTTCATGGGATTTTATTGGGGAGGGAAAAATTTTCTGATGGGATTCTATATACGTCACAGGACTCCCATTATTCAATATTCAAAATAGCAAGGATGTATAAAATGCAATGCGTGAAAGTTGGCACGTTGGTCTCTGGGGAGATTGATTACACTGATTTGAAGTCTCAACTTGCTCACAAGGACAAGCCAGCCATCATCAATCTAAATATAGGAACAACTATGAAAGGAGCTATTGATGACATTGATCATGTACTACAAACACTTGATGAAAGTGGCTTCCATCGTGATCGATTCTATATTCATTGTGATGGAGCCTTATTCGGAATAATGCTACCATTTATTAAAGGAGCTCCAAAGATTACCTTCAAGAAGCCCATTGGAAGTATAACCATTTCTGGCCATAAGTTCTTGGGCTGCCCAATTCCTTGTGGTGTTATGATAACACGTTTAGAACACATCAATGCCTTATCAAGACATGTTGAATACATTGCTTCAAGGGATGCCACAATCACAGGTAGTCGTAGTGGGCATGCTTCAATCTTCCTTTGGTATGCTCTCCAAGAAAGAGGTTTAATAGGACTCAAAAAACAAGTAGAGGAGTGTCTCCTGAATGCACGCTACTTCTATGATCAACTGCGTAAACGTGGCATTGGTGCAATGCTGAATGAATTTAGTAATACAGTTGTCTTTGAAAGGCCTCTGGATGAAGAATTTACACGCAAGTGGAATTTGGCTTGTAAGGGTAATATTGCACATGTGGTTGTGATGCAGCATGTTACCGTCGAAACCATAGACTCCTTTGTTGTTGAATTTACTAGAAAGCAACTCATTTGTTTAGGAGAAACGTTCAGAAAGCCTCCATGCATTGCAAAGGACATTGGTGCTAAAAATTGTGCTTGTGCATTGCATAGTTCATACCCATGGGGAGAAATGATTTGA 1257 0.3994 MSLAITKGNGETKANLAEIITHYVGTLNQNKLHFLGYPTNLDFDYDALKPLLHFHLNNAGDPFIRSSFSLNSTEFEVCVLDWFANLWKINRDEYWGYVTTGGTEGNLHGILLGREKFSDGILYTSQDSHYSIFKIARMYKMQCVKVGTLVSGEIDYTDLKSQLAHKDKPAIINLNIGTTMKGAIDDIDHVLQTLDESGFHRDRFYIHCDGALFGIMLPFIKGAPKITFKKPIGSITISGHKFLGCPIPCGVMITRLEHINALSRHVEYIASRDATITGSRSGHASIFLWYALQERGLIGLKKQVEECLLNARYFYDQLRKRGIGAMLNEFSNTVVFERPLDEEFTRKWNLACKGNIAHVVVMQHVTVETIDSFVVEFTRKQLICLGETFRKPPCIAKDIGAKNCACALHSSYPWGEMI* 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g2124 418 SUPERFAMILY PLP-dependent transferases 28 376 IPR015424 -
Apr8g2124 418 PANTHER - 8 409 - -
Apr8g2124 418 ProSitePatterns DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 234 255 IPR021115 GO:0016831
Apr8g2124 418 Gene3D Aspartate Aminotransferase, domain 1 293 380 IPR015422 GO:0003824
Apr8g2124 418 PANTHER SERINE DECARBOXYLASE 8 409 - -
Apr8g2124 418 Pfam Pyridoxal-dependent decarboxylase conserved domain 68 331 IPR002129 GO:0016830|GO:0019752|GO:0030170
Apr8g2124 418 Gene3D - 52 292 IPR015421 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g2124 Apr-Chr8 31805209 31808625 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g2124 176 322 Calmodulin-binding Proteins AT2G02010 26.282 7.48e-06 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g2124 K25193 - gmx:100784867 635.18