Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g2121 ATGCCGGCGCCGCCGCAGACCGGATTCAATCACGGAGGATCCCTCTCCGACGACCCCTTCCCCGTCGCCGACTGCTTCGACGATCTGCCCAACTTCGATTTTGAACCTTTCGAATTCAACGACTACAACTTCCCGCCTCCACCGCCATTCGACGTCGGAGAGGCCTTCGATTCGATGTTAATGGGGGAATTGAACGGCTGGTTTTCGATGCTCGACGAGCAACCCGATGATTGGCTCGCCCAGAACTGGCCCACGGAATCCGGTTATCCCGACGGAATCGGAATGGCCGGCGACGGCGGCATCGGCGGCGAGAAGGGTGGGGAAGGGAAAACGGTGGAGCAGCATCACCTGCAGAACAAATCCGTGGACGGGTCCTCGACGGCGGCGTCTGAGTTGAAATTGCTTGGTTTGGTGAAGAAAACCATGGCTCCTGAGAAGCTCGCTGAACTTACAAGGGTTGATCCTAAGAGGGCAAAGAGGATTATGGCCAATAGGAAATCTGCTGCTAAATCGAAGGAGAAGAAAGCGCATTATATAAATGAGCTAAAAGAGAGGGTCGAAACACTTCAAACTGAAGCAATTAACCTTTCTTCACATGTTATCTTGATTCAGAGAGACACTGCAGATATTGCCAGTCGGAATAAGGCGCTCAAACTATGCATAGCGGCAACGAAAGATCAAGTGAAAATTAGAAATGCCATCACCAAGGCGTTCAAGGATAAAATTGAGATCCTTAAAGATGAGACTGAGCAGATTTATGCTATAACGGGTTATCCTCCTTCATATCCCGAGTTGGTCTCCAAGTTATCCCAGTTATCTGTGAATCAGCTTCAAAATCCTCCATCCAAGAATGTGACTCCTGATGATCAGCAACCACAGCTCTGCATGCCTCCTCCTCCTCCTCCCTCTAATCAGAATTTCAGCGGGTATTGTGACGACCCTAGTTTCTCCAACTTCAACCAACCCAACTAA 972 0.5 MPAPPQTGFNHGGSLSDDPFPVADCFDDLPNFDFEPFEFNDYNFPPPPPFDVGEAFDSMLMGELNGWFSMLDEQPDDWLAQNWPTESGYPDGIGMAGDGGIGGEKGGEGKTVEQHHLQNKSVDGSSTAASELKLLGLVKKTMAPEKLAELTRVDPKRAKRIMANRKSAAKSKEKKAHYINELKERVETLQTEAINLSSHVILIQRDTADIASRNKALKLCIAATKDQVKIRNAITKAFKDKIEILKDETEQIYAITGYPPSYPELVSKLSQLSVNQLQNPPSKNVTPDDQQPQLCMPPPPPPSNQNFSGYCDDPSFSNFNQPN* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g2121 323 Gene3D - 156 204 - -
Apr8g2121 323 Coils Coil 172 199 - -
Apr8g2121 323 MobiDBLite consensus disorder prediction 277 291 - -
Apr8g2121 323 MobiDBLite consensus disorder prediction 277 323 - -
Apr8g2121 323 Pfam bZIP transcription factor 156 200 IPR004827 GO:0003700|GO:0006355
Apr8g2121 323 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 154 217 IPR004827 GO:0003700|GO:0006355
Apr8g2121 323 SMART brlzneu 151 216 IPR004827 GO:0003700|GO:0006355
Apr8g2121 323 MobiDBLite consensus disorder prediction 306 323 - -
Apr8g2121 323 SUPERFAMILY Leucine zipper domain 156 205 IPR046347 GO:0003700|GO:0006355
Apr8g2121 323 PANTHER BASIC-LEUCINE ZIPPER (BZIP) TRANSCRIPTION FACTOR FAMILY PROTEIN-RELATED 74 291 - -
Apr8g2121 323 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 74 291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g2121 Apr-Chr8 31767543 31773142 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g2121 102 258 bZIP Transcription Factor Family AT2G40620 48.408 7.59e-37 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Apr8g2121 bZIP_1 1.3e-07 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g2121 K20557 - gmx:778142 155.606