Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g2120 ATGGCATCTGATCATTCATCCCTCAACAGCCAAACCAAATTTCTCCATCAAAACAGTGACCTTGAGCAACAAGCAACACTAGAGGTTGAAACCAAGGACTTCGATTACTCAAAAAGATCTCAATGGCTACGTGCTGCTGTTTTAGGAGCCAACGATGGGTTAGTCTCCACAGCATCTCTAATGATGGGTGTGGGAGCAGTGAAGCAAGACATTAAAGTCATGATCCTAACAGGGTTTGCAGGGCTAGTGGCAGGTGCTTGTAGCATGGCCATAGGAGAATTTGTGTCTGTGTACTCACAGTTAGACATAGAAGTTGCTCAACTGAAAAGAGACAAAGAAAGGGGCAATGAGAGACATAGAGAAGAGGACGATAACAAAGAGAAAGAGAGTTTGCCAAACCCTTTGCAAGCAGCAGCAGCATCAGCTTTAGCATTTTCAGTTGGTGCAATGGTTCCCTTACTTGCAGCCTCTTTTATAAGGGATTATAAGGTGAGATTAGGAGTGGTTTTGGGAGCAGTGAGTTTTGCTCTTCTGGTCTTTGGTTGGTTAGGAGCAGTTTTGGGTAAGGCTCCAGCATTGAGGTCTTGTGTGAGGGTCTTGGTTGGGGGTTGGCTAGCCATGGCTATAACTTTTGGGCTAACCAAGTTGATTGGGTCAAGTGCTCTTTAG 669 0.4514 MASDHSSLNSQTKFLHQNSDLEQQATLEVETKDFDYSKRSQWLRAAVLGANDGLVSTASLMMGVGAVKQDIKVMILTGFAGLVAGACSMAIGEFVSVYSQLDIEVAQLKRDKERGNERHREEDDNKEKESLPNPLQAAAASALAFSVGAMVPLLAASFIRDYKVRLGVVLGAVSFALLVFGWLGAVLGKAPALRSCVRVLVGGWLAMAITFGLTKLIGSSAL* 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g2120 222 MobiDBLite consensus disorder prediction 111 130 - -
Apr8g2120 222 Pfam VIT family 122 214 IPR008217 GO:0005384|GO:0030026
Apr8g2120 222 Pfam VIT family 43 124 IPR008217 GO:0005384|GO:0030026
Apr8g2120 222 CDD Nodulin-21 41 192 - -
Apr8g2120 222 Coils Coil 98 125 - -
Apr8g2120 222 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 12 219 IPR008217 GO:0005384|GO:0030026
Apr8g2120 222 MobiDBLite consensus disorder prediction 111 132 - -
Apr8g2120 222 PANTHER VACUOLAR IRON TRANSPORTER HOMOLOG 2.1 12 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g2120 Apr-Chr8 31752868 31753536 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g2120 18 222 Nodulin-like Gene Family AT3G43660 68.780 2.08e-99 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g2120 K22736 - gmx:100815165 361.303
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g1277 6 17633074 17634899 Apr8g2120 8 31752868 31753536 PCT