Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g2119 ATGGGTAGGAAGAAGCCCACGACGAGGGACGAAGAGAACGCGTCGCAGCAAGGCGGTGGGAAATCGAAGAAAAAGGCGCATGTAATAGACGACGATGAGTACTCCATCGGAACCGCAGTCTCCGACGAGCCGCAACCGGAAGAGAAACCTGCTGCAGCCGGTAAGAAGAAGGGTAAAAAAGGTAATGCCAAAGCTAAGAATGATGATGACGATGATGATTTCGTTGTTGATGACGATGATGTGTCAGAAGTTGGGAAGAAGAAGGGCAAAACGAAAAAGGGCGGTGGGAGCAGTGTGTTCAGTGCATCTAGTTTTGGTTTACTTGGTGATGAGGAAGATGGTGGTGATGATGACGATGAGAAATCTGGGTTAACCGGTGAACTGGATGGTGAGGATGAGGATGAGGATGAACCGGTGGTTAGTTTTACGGGTAAGAAGAAACCCTCCAAGGGTTCGAAGAAGGGTGGTGGTAGTTTGTTCACTGCATCGGCTCTTCATGCTATTGATGATGGTGATGATGATGATAAGGGTGGCGAGGAGGAGGATGATCCGGTGGTTAGTTTTTCTGGTAAGAAGAAGCCGTCAAAGGGTTCGAAGAAGGGCGGTGGGAGTTTGTTTTCTGCTGCGGCTTTTGATGCTATTGATGATGATGATGATGGGGATGGTGAGGTGGTGGTCGATGATGGCGGGGATGAGGATGATGATATTGATGAACCGGTTATTGCATTCACCGGGAAGAAGAAGTCTTCGAAAGGAGGCAAGAAGGGTGGTGCTTTGTCTTCGGCTGCTAGTTTTGGTGAGGTTGATGATGGAGAGGAGAATAAGGATGAGAAGGTAGATGGTGGTGATGATGAAGACATTGGACCAATCACGTTCTCTGGTAAGAAAAAGAAGTCGTCAAAGTCTTCGAAAAAGTCTGTTAATTCACTGAGTAAAGGTTTTCCTGATGAGGAAGATGTTTCTGTGCCTGAGTCTGGTAAAGGTGGTGAGGACAAGGATGAGGATGATGTTTCCTTAGTCGCGTTTACTGGTAAAAAGAAATCTTCTAAAAAGAAAAGCGGTAGCAGTGCTACTAAAGGGAGTGGTGAAATTGGGATTGGGAGTGAACATGTAGATGTTGTTGAGTCTGAGCAACCCAGTGTTGCAATCGGTAGTACTGGTACTGAAAATAACAATGTTAATAAGAGTGAAGAGGTCGCTGAAACTTCCAAAAATAAGAAAAAGAATAAGAAGAAGAGTGGAAGAACTGCTCAAGAGGAGGAAGATTTAGACAAGATTCTTGCAGAACTTGGTGAGGGCCCTCCTGCAGCGAAACCTGCAGCTCCTCCACCACAGGAAGATAAAGTTCAGCCCGCTCCTGAAGTAGGTTCTGCTGCTGATGCTTCTGGGGAAAAGGAGGGTGAAGAAGAGGCTGTAGAGTCAGCTGCTGCAAAGAAGAAGAAGAAGAAAAAGGAAAAGGAAAAGGAGAAGAAGGCAGCTGCGGCGGCAGCTGCAGCTGGAACTGAAACTGCCGAAGTTAAAGCTGAGACAATTGAACCAAAGAAGAATGAGTCAAAGACTAAAGCAGCTGACAAGAAAGTGCCAAAGCACGTTAGAGAGATGCAAGAGGCACTGGCTCGAAGAAAGGAGGCTGAAGAAAGGAAGAAAAGAGAAGAGGAGGAGAAGTTAAGGAAGGAAGAAGAGGAGCGACGTAGGCAAGAGGAGGTTGAGAGACAGGCAGAAGAGGCTAGACGTAGAAAGAAGGAAAGAGAAAAGGAGAAACTCCAGAAAAAGAAACAAGAAGGTAAACTATTAACTGGAAAGCAGAAGGAAGAAGCCCGCCGTCGGGAGGCAATGAGGAGGCAAATTCTCAATAACACCGGGGCTGTGACTCTCCCCTCTGGGGAATCTGGTGCTCCGGCCAAAAAACCCATTTATCAGACAAAGAAGTTAAAACCAAACCATCGAAATCAGAATGGTGCTGCTGCTGCTGCTCAGTTAGCTGAAAGTGTTGAAGTGAAGGAGACTACCCCTGATGTGGGTTCAGAGGAACCAGAAATGGTTGAAGTGGATTCGATGCAGGTGGAAGACAAAGTTGAACTTCCTGAAGCTGTTGAAGAGGATGTAGTGGAAGATGATATAGAGGATGAATGGGATGCAAAAAGCTGGGATGATGTTAATCTTAATGCAAAAGGCGCATTTGCGGATGAAGAGGCGGACTCAGAGCCTGAACCTATTGTCAGAAGGGAGACTAAAAATCCCATACCCTCAAATGCCGGTGCTACTAATAAAACTGTTTCTAAGCCTGTGGCTGAAGAAATTGAAGATAGAAAGCAGGCTAACATTGTGGTTGTGGACTTGAAAAGGGAACAACAGAAGTCTGCTTTGCCAAAGGAACAACCAAAGTCTGTCTTGCCTCCAAAGCCCAATGATGAGAACCTCCGTTCCCCAATTTGCTGTATCATGGGGCATGTAGATACTGGCAAAACCAAGCTTCTGGATTGTATTCGAGGTACAAATGTTCAGGAGGGTGAAGCAGGTGGTATCACACAACAGATTGGTGCAACATACTTTCCTGCTGAGAACATACGTGAAAGAACGAAGGAACTGAAAGCTGATGCGAAGCTGAAAGTTCCTGGTCTACTGGTTATTGATACCCCAGGGCACGAATCATTTACTAACTTGAGGTCTCGTGGTTCAGGTCTATGTGATATTGCAATTTTGGTTGTTGACATTATGCATGGATTAGAGCAACAAACAATAGAATCACTAAATCTATTAAAAATGAGGAATACAGAATTCATTGTTGCCTTGAATAAGGTTGACAGGCTTTATGGGTGGAAAACTAGTCGCAATTCTCCAATTGTTAAAGCAATGAAGCAGCAGTCTAAGGATGTTCAAAATGAGTTCAATATGAGGCTTACTCAGATTATTACTCAATTCAAGGAACAGGGGCTAAATACTGAGTTGTATTATAAAAACAAAGAAATGGGAGAAACTTTCAGCATTGTGCCTACAAGTGCAATAAGTGGCGAAGGAATCCCTGATCTGTTATTGCTATTGGTTCAATGGACCCAAAAAACAATGGCTGAGAAACTTACATACAGTGAAGAAGTCCAGTGTACTGTTTTGGAAGTCAAGGTAGTTGAAGGCCATGGAACTACTATTGATGTTGTTTTAGTTAATGGTGTTCTTCATGAAGGAGATCAGATAGTTGTCTGTGGAATGCAGGGGCCAATTGTTACTTCAATTCGAGCTTTATTGACACCTCATCCAATGAAGGAACTCCGTGTCAAGGGAACATATCTTCATCACAAAGAAATCAAAGCTGCAATGGGTATAAAGATCACTGCCCAGGGCCTTGAACATGCCATTGCTGGCACTGGTTTATATGTGGTGAAGGCCGAGGATGATTTGGAAGATGTGAAAGAAGCAGCTATGGAAGATATGCGGTCAGTCATGAGCAGGATTGACAGGACTGGTGAGGGGGTTTGCGTACAGGCATCTACCCTTGGCTCCTTGGAAGCATTACTGGAGTTTTTGAAAACTCCTGAAGTGAGTATTCCTGTGAGTGGTATAAGCATAGGCCCTGTACATAAAAAGGATGTAATGAAGGCCAGTGTGATGCTTGAAAAGAAGCGAGAGTATGCTGCTATATTGGCATTTGATGTCAAAGTCACTCAAGAGGCTAGGGAGCTTGCAGATGAATTGGGCGTGAAAATTTTTATTGCTGATATTATTTATCACCTGTTTGATCAATTTAAGGCTTATATTGACAACATTAAAGAGGAGAAAAAGCGAGAAGCTGCTGATGAGGCAGTCTTCCCATGTGTTCTGAAAATTTTACCAAACTGCATTTTCAACAAGAAGGATCCAATTGTTTTGGGAGTTGATATTCTTGAAGGCACTTTGAAGATTGGGACTCCAATTTGTATTCCTTCAAGAGAGTTCATTGATATTGGTCGCATTGCCTCCATTGAGAATAACCATAAACCTGTTGATTATGCAAAGAAGGGGCAGAAAGTAGCCATTAAGATTGTTGGCAGCAACCCTGAGGAGCAACAGAAAATGTATGGGAGGCATTTTGAGATTGATGATGAACTTGTAAGCCATATTTCGCGGAGATCTATTGATATACTCAAAACTAATTATCGGGATGATCTGACTATGGATGAATGGAGGCTTGTTGTGAAATTGAAGAATCTTTTCAAGATACAATGA 4200 0.4376 MGRKKPTTRDEENASQQGGGKSKKKAHVIDDDEYSIGTAVSDEPQPEEKPAAAGKKKGKKGNAKAKNDDDDDDFVVDDDDVSEVGKKKGKTKKGGGSSVFSASSFGLLGDEEDGGDDDDEKSGLTGELDGEDEDEDEPVVSFTGKKKPSKGSKKGGGSLFTASALHAIDDGDDDDKGGEEEDDPVVSFSGKKKPSKGSKKGGGSLFSAAAFDAIDDDDDGDGEVVVDDGGDEDDDIDEPVIAFTGKKKSSKGGKKGGALSSAASFGEVDDGEENKDEKVDGGDDEDIGPITFSGKKKKSSKSSKKSVNSLSKGFPDEEDVSVPESGKGGEDKDEDDVSLVAFTGKKKSSKKKSGSSATKGSGEIGIGSEHVDVVESEQPSVAIGSTGTENNNVNKSEEVAETSKNKKKNKKKSGRTAQEEEDLDKILAELGEGPPAAKPAAPPPQEDKVQPAPEVGSAADASGEKEGEEEAVESAAAKKKKKKKEKEKEKKAAAAAAAAGTETAEVKAETIEPKKNESKTKAADKKVPKHVREMQEALARRKEAEERKKREEEEKLRKEEEERRRQEEVERQAEEARRRKKEREKEKLQKKKQEGKLLTGKQKEEARRREAMRRQILNNTGAVTLPSGESGAPAKKPIYQTKKLKPNHRNQNGAAAAAQLAESVEVKETTPDVGSEEPEMVEVDSMQVEDKVELPEAVEEDVVEDDIEDEWDAKSWDDVNLNAKGAFADEEADSEPEPIVRRETKNPIPSNAGATNKTVSKPVAEEIEDRKQANIVVVDLKREQQKSALPKEQPKSVLPPKPNDENLRSPICCIMGHVDTGKTKLLDCIRGTNVQEGEAGGITQQIGATYFPAENIRERTKELKADAKLKVPGLLVIDTPGHESFTNLRSRGSGLCDIAILVVDIMHGLEQQTIESLNLLKMRNTEFIVALNKVDRLYGWKTSRNSPIVKAMKQQSKDVQNEFNMRLTQIITQFKEQGLNTELYYKNKEMGETFSIVPTSAISGEGIPDLLLLLVQWTQKTMAEKLTYSEEVQCTVLEVKVVEGHGTTIDVVLVNGVLHEGDQIVVCGMQGPIVTSIRALLTPHPMKELRVKGTYLHHKEIKAAMGIKITAQGLEHAIAGTGLYVVKAEDDLEDVKEAAMEDMRSVMSRIDRTGEGVCVQASTLGSLEALLEFLKTPEVSIPVSGISIGPVHKKDVMKASVMLEKKREYAAILAFDVKVTQEARELADELGVKIFIADIIYHLFDQFKAYIDNIKEEKKREAADEAVFPCVLKILPNCIFNKKDPIVLGVDILEGTLKIGTPICIPSREFIDIGRIASIENNHKPVDYAKKGQKVAIKIVGSNPEEQQKMYGRHFEIDDELVSHISRRSIDILKTNYRDDLTMDEWRLVVKLKNLFKIQ* 1400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g2119 1399 Gene3D Translation factors 1262 1399 - -
Apr8g2119 1399 MobiDBLite consensus disorder prediction 785 804 - -
Apr8g2119 1399 CDD aeIF5B_II 1031 1141 - -
Apr8g2119 1399 Gene3D - 1151 1255 IPR036925 -
Apr8g2119 1399 MobiDBLite consensus disorder prediction 461 480 - -
Apr8g2119 1399 PANTHER PHOTOSYSTEM II PROTEIN D1 1 1399 - -
Apr8g2119 1399 Coils Coil 465 497 - -
Apr8g2119 1399 CDD IF2_aeIF5B_IV 1270 1365 - -
Apr8g2119 1399 MobiDBLite consensus disorder prediction 212 238 - -
Apr8g2119 1399 MobiDBLite consensus disorder prediction 413 428 - -
Apr8g2119 1399 MobiDBLite consensus disorder prediction 507 614 - -
Apr8g2119 1399 PANTHER TRANSLATION INITIATION FACTOR IF-2-RELATED 1 1399 IPR015760 -
Apr8g2119 1399 Gene3D - 801 1029 IPR027417 -
Apr8g2119 1399 MobiDBLite consensus disorder prediction 317 341 - -
Apr8g2119 1399 MobiDBLite consensus disorder prediction 728 742 - -
Apr8g2119 1399 Pfam Translation-initiation factor 2 1134 1248 IPR023115 -
Apr8g2119 1399 PRINTS GTP-binding elongation factor signature 811 824 IPR000795 GO:0003924|GO:0005525
Apr8g2119 1399 PRINTS GTP-binding elongation factor signature 875 885 IPR000795 GO:0003924|GO:0005525
Apr8g2119 1399 PRINTS GTP-binding elongation factor signature 891 902 IPR000795 GO:0003924|GO:0005525
Apr8g2119 1399 PRINTS GTP-binding elongation factor signature 927 936 IPR000795 GO:0003924|GO:0005525
Apr8g2119 1399 Pfam Elongation factor Tu GTP binding domain 811 1019 IPR000795 GO:0003924|GO:0005525
Apr8g2119 1399 MobiDBLite consensus disorder prediction 379 398 - -
Apr8g2119 1399 CDD IF2_eIF5B 810 1020 - -
Apr8g2119 1399 Coils Coil 527 598 - -
Apr8g2119 1399 MobiDBLite consensus disorder prediction 728 756 - -
Apr8g2119 1399 Pfam Elongation factor Tu domain 2 1046 1121 IPR004161 GO:0005525
Apr8g2119 1399 MobiDBLite consensus disorder prediction 1 705 - -
Apr8g2119 1399 SUPERFAMILY Initiation factor IF2/eIF5b, domain 3 1132 1261 IPR036925 -
Apr8g2119 1399 SUPERFAMILY Translation proteins 1266 1398 IPR009000 -
Apr8g2119 1399 MobiDBLite consensus disorder prediction 110 138 - -
Apr8g2119 1399 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 807 1098 IPR027417 -
Apr8g2119 1399 Gene3D Translation factors 1030 1150 - -
Apr8g2119 1399 TIGRFAM small_GTP: small GTP-binding protein domain 812 937 IPR005225 GO:0005525
Apr8g2119 1399 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 807 1023 IPR000795 GO:0003924|GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g2119 Apr-Chr8 31738979 31748694 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g2119 230 1399 Eukaryotic Initiation Factors Gene Family AT1G76810 65.388 0.0 1201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g2119 K03243 - gmx:100814875 1650.57