Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g2116 ATGGAAGGAAATTTGTCACAGGGAGGTATAATTCAAGGTGGGAGTTCTTTTGGTGGCTTTGATTTGCCAGGATCAATTCGGGTTCAACATCAAGCACAGCATCCGCATACCATGCACCAACATCAAACTCATCCGCGTCAAGGGTCTTCTGCTGTCCATTCTGCGGTTCATGATGGTTTTCCACTTACTGTGGGAACCTTACAGAACTGTGATCAAACCATTTCAATGACAGATTTTAGTAAAGGAGACAGAAGCAAAAACTCAGCAAGTGAGGAAGATGAACCGAGCTTTACTGAGGACGGTGTTGATGGTCACCATGAAGTGAGTAGAGGGAAAAAAGGATCACCTTGGCAGAGAGTGAAGTGGACTGATAAGATGGTAAAGCTTCTGATAACTGCTGTTTCTTATATAGGCGAGGATGTGACTGCTGATGGTGGTGGCAGTGGAAGAAGGAAGTTTGCGGTCCTACAGAAGAAGGGTAAGTGGAAATCTGTTTCTAAGGTCATGGCTGAAAGAGGTTATCATGTCTCACCACAGCAATGCGAGGATAAATTCAATGATCTTAACAAAAGGTATAAAAAACTTAATGATATGATAGGGAGGGGCACTTCTTGTCAGGTTGTTGAAAATCCTACACTGTTGGATGTAATAGATTATCTTTCTGAGAAAGAAAAGGATGATGTTCGAAAAATATTAAGCTCAAAACACTTGTTCTATGAAGAGATGTGTTCTTATCATAATGGTAATAGATTGCATTTACCCCCTGATCCTGCATTGCAACGTTCTTTGCAGTTAGCTCTCCGAAATAGAGATGATCATGATAATGATGATATTAGAAGGTCCCATCATGATGATCATGAGGAAGATGATCAAGATGTGGAAATTGACGATCATGACGACTTTGAAGAGAATTGTACTTCCCATGGGGATAGTAGAGGAATATATGGGCCATTGGGTGGATCTATGAAGAAATTGAAACGAGGCCAAGGCCAAGAAGATGCTAATAATTTTGGTAATTCTTTAAATTGTCAGGACTACAGCAAAAGTTCATATCCCCATGGACAGATGGTCCAGTCTGATGTGAGTCAAGTATTACCCGAGAACTCAAGAGCCGCTTGGTTACAGAAGCAATGGATTGAATCACGCTCGCTTCAGTTAGAAGAACAAAAGTTACAAATTCAGGTTGAAATGCTGGAACTAGAGAAACAGAGGTTCAAGTGGCAGAGGTTTAGTAAGAAAAAGGACCGGGAGTTGGAGAAGCTGAGTCTAGAAAATGAAAGAATGAAGCTTGAAAATGAGCGTATTGCTTTAGAACTGAAGCGAAAGGAAATGGGCACTGGCTTTAACTAG 1350 0.4111 MEGNLSQGGIIQGGSSFGGFDLPGSIRVQHQAQHPHTMHQHQTHPRQGSSAVHSAVHDGFPLTVGTLQNCDQTISMTDFSKGDRSKNSASEEDEPSFTEDGVDGHHEVSRGKKGSPWQRVKWTDKMVKLLITAVSYIGEDVTADGGGSGRRKFAVLQKKGKWKSVSKVMAERGYHVSPQQCEDKFNDLNKRYKKLNDMIGRGTSCQVVENPTLLDVIDYLSEKEKDDVRKILSSKHLFYEEMCSYHNGNRLHLPPDPALQRSLQLALRNRDDHDNDDIRRSHHDDHEEDDQDVEIDDHDDFEENCTSHGDSRGIYGPLGGSMKKLKRGQGQEDANNFGNSLNCQDYSKSSYPHGQMVQSDVSQVLPENSRAAWLQKQWIESRSLQLEEQKLQIQVEMLELEKQRFKWQRFSKKKDRELEKLSLENERMKLENERIALELKRKEMGTGFN* 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g2116 449 MobiDBLite consensus disorder prediction 272 339 - -
Apr8g2116 449 MobiDBLite consensus disorder prediction 84 116 - -
Apr8g2116 449 MobiDBLite consensus disorder prediction 77 116 - -
Apr8g2116 449 PANTHER F16F4.11 PROTEIN-RELATED 1 449 - -
Apr8g2116 449 Pfam Myb/SANT-like DNA-binding domain 119 245 IPR044822 -
Apr8g2116 449 PANTHER FACTOR, PUTATIVE-RELATED 1 449 - -
Apr8g2116 449 Coils Coil 381 403 - -
Apr8g2116 449 MobiDBLite consensus disorder prediction 272 288 - -
Apr8g2116 449 MobiDBLite consensus disorder prediction 1 54 - -
Apr8g2116 449 Gene3D - 122 194 - -
Apr8g2116 449 MobiDBLite consensus disorder prediction 30 50 - -
Apr8g2116 449 Coils Coil 411 443 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g2116 Apr-Chr8 31710479 31715254 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Apr8g2116 Myb_DNA-bind_4 1e-23 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g2116 - - gmx:100812134 768.074
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g1286 6 17820604 17824169 Apr8g2116 8 31710479 31715254 PCT